mRNA_M-pyrifera_M_contig103176.672.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: A0A7W0QCC0_9DELT (TonB-dependent receptor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0QCC0_9DELT) HSP 1 Score: 236 bits (601), Expect = 9.440e-70 Identity = 115/208 (55.29%), Postives = 150/208 (72.12%), Query Frame = 1 Query: 1 CGGSIDVHIVDAITHQPVAATVITANGVAVGITDEDGHFLVGKLCQGTVAIEATRGDYATEQVDVAVDVGKTSLELEMRPANGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRLLK 624 C ++D H+VD H+P+ ++ NG V TD G F + C GT+ +E R DY + + SLELE+ + EV++I + +MRS+T ++GEALERTRGR FS+TLA+VPGVSQLRS +G+ KPIVRGQ+GRRLL+LVDG+RHR+QEWGLDH PE+DPF+AD +TVVRGA+GVRYGPDAIGGA+LV PP LL+ Sbjct: 6 CTSTVDGHVVDHAMHEPIPGAMVRVNGRPVAETDAAGRFALRGQCPGTLTVEVERADYVPRSQTLVLGRA-ASLELELTAYDSEVIVIKDKAPPPTEMRSTTVLSGEALERTRGRGFSETLAEVPGVSQLRSSSGMAKPIVRGQYGRRLLILVDGVRHRAQEWGLDHVPEIDPFVADKLTVVRGASGVRYGPDAIGGAVLVDPPELLR 212
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: A0A7W0VHG8_9DELT (TonB-dependent receptor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0VHG8_9DELT) HSP 1 Score: 235 bits (599), Expect = 2.800e-69 Identity = 113/208 (54.33%), Postives = 154/208 (74.04%), Query Frame = 1 Query: 1 CGGSIDVHIVDAITHQPVAATVITANGVAVGITDEDGHFLVGKLCQGTVAIEATRGDYATEQVDVAVDVGKTSLELEMRPANGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRLLK 624 C ++D H+VD TH+PVA +++ + TDE G F + ++C+G + + R DY ++ +A+ S+E+E+ + EV+LI E A++MRS+T ++G LE+ RG+ ++ LADVPGVSQLRS +G+GKPIVRGQFGRRLLLLVDG+RHRSQEWGLDHAPE+DPF+A +TVVRGA+GVRYGPDAIGGA+LV PP LL+ Sbjct: 38 CTATVDGHVVDRKTHEPVAGASVSSGANLLAQTDEGGRFTLIRVCRGPLELAIERADYVVDRRTLAIGATAISVEIELE-LSSEVILIEEEAPDAVEMRSATTLSGAELEKARGKGLAEALADVPGVSQLRSASGMGKPIVRGQFGRRLLLLVDGIRHRSQEWGLDHAPEIDPFVASKLTVVRGASGVRYGPDAIGGAVLVEPPELLR 244
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: UPI0019BA29F2 (TonB-dependent receptor n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019BA29F2) HSP 1 Score: 227 bits (579), Expect = 1.810e-66 Identity = 113/209 (54.07%), Postives = 149/209 (71.29%), Query Frame = 1 Query: 1 CGGSIDVHIVDAITHQPVAATVITANGVAVGITDEDGHFLVGKLCQGTVAIEATRGDY--ATEQVDVAVDVGKTSLELEMRPANGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRLL 621 C S+D H+VDAI+H + + + V TD +G F++ C TV ++ R DY A VD+A TS+EL + P + EV+ + + DMRS+T ++G+ LERTRGR+FS+ L +VPGVSQL SG G+ KP++RGQ+GRRLL+LVDG+RHR+QEWGLDHAPE+DPFIAD +TVVRGA+GVRYGPDAIGGA+L PP LL Sbjct: 21 CRSSLDGHVVDAISHDVIPGATVRVDDHVVAETDAEGRFVLTARCDRTVDLQVDRADYQVAHRTVDLAA---VTSIELALEPFDQEVIEVRAKAPDPTDMRSTTAISGDKLERTRGRAFSEALTEVPGVSQLGSGTGMAKPMIRGQYGRRLLILVDGIRHRAQEWGLDHAPEIDPFIADKLTVVRGASGVRYGPDAIGGAILADPPDLL 226
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: A0A7Y6UDX1_9DELT (TonB-dependent receptor n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7Y6UDX1_9DELT) HSP 1 Score: 213 bits (541), Expect = 3.620e-61 Identity = 108/196 (55.10%), Postives = 137/196 (69.90%), Query Frame = 1 Query: 31 DAITHQPVAATVITANGVAVGITDEDGHFLVGKLCQGTVAIEATRGDYATEQVDVAVDVGKTSLELEMRPANGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRL 618 DA TH+PV A + + TD+ G F + LC G V + R DY + V V + SLE+EMRPA GEV+ + + +MRS+ V+G L++TRG+SFSDTLA VPGV QLR+ G+ KPI+RGQFGRRLLLLVDG+RHR+QEWG++HAPE+DPFIAD ++VVRG GVRYG DAIGG +LV PP L Sbjct: 2 DAATHEPVVAATVRIGDQLLATTDDSGRFALTALCPGQVVVVVERDDYQPAERSVLVG-DQASLEVEMRPA-GEVIEVRDKAPPPTEMRSTAVVSGAELDKTRGKSFSDTLAKVPGVVQLRATTGVAKPIIRGQFGRRLLLLVDGIRHRAQEWGIEHAPEIDPFIADSLSVVRGPGGVRYGGDAIGGVVLVDPPEL 195
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: A0A7V9LD05_9DELT (TonB-dependent receptor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V9LD05_9DELT) HSP 1 Score: 194 bits (493), Expect = 2.190e-54 Identity = 102/189 (53.97%), Postives = 134/189 (70.90%), Query Frame = 1 Query: 52 VAATVITANGVAVGITDEDGHFLVGKLCQGTVAIEATRGDYATEQVDVAVDVGKTSLELEMRPANGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRL 618 +AATV T + + TDE G F + LC+ ++I R DY + +++ G S+E+E+ A GEV+ + + DMRS+ + G ALE++RG++F+ LADVPGVS+LRS G+ KPI+RGQFGRRLL+LVDG+RHRSQ+WGLDHAPE+DPFIAD I VVRG GVRYG DAIGG +LV PP L Sbjct: 2 IAATVRTGAQL-LATTDEAGRFALTNLCKRPLSIVVERDDYKPVERTISIS-GHVSIEIELTTA-GEVIELRDKAPPPPDMRSTATIDGAALEKSRGKAFTAALADVPGVSELRSATGVAKPIIRGQFGRRLLILVDGVRHRSQDWGLDHAPEIDPFIADRIRVVRGPGGVRYGSDAIGGVVLVDPPDL 187
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: A0A2F0APA0_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2F0APA0_9DELT) HSP 1 Score: 159 bits (401), Expect = 1.920e-41 Identity = 86/212 (40.57%), Postives = 123/212 (58.02%), Query Frame = 1 Query: 1 CGGSIDVHIVDAITHQPVAATVITANGVAVGI-TDEDGHFLVGKLCQGTVAIEATRGDYATEQVDVAVDVGKTSLELEMRP---ANGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRLLK 624 C G I +VD +P+A + A + + TD G + + +C G + R DYA + + V+ + L + + P G+ +L+ R +A D RS + G+ L RTRG + +D LA +PGV+ LR+G KP+VRGQ+G R+L L DG+RH Q+WGLDH PE+D F + VV+G+AGVRYGPDAI G LL+ PP L K Sbjct: 19 CEGVIHGRVVDGKDGRPLARARLDAGENSKPVRTDAKGQYRLTGVCAGPAKLRVVRSDYALRIIKINVEKNQ-ELNVTLAPITVTQGDDILVQAPRLKASDTRSVVSLEGDVLMRTRGENLADALAQLPGVTVLRNGT-TAKPVVRGQYGSRVLKLYDGVRHEGQDWGLDHGPEIDSFATGSMRVVKGSAGVRYGPDAIAGVLLIDPPELPK 228
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: UPI001A9577D2 (TonB-dependent receptor n=1 Tax=Pedobacter sp. SYSU D00823 TaxID=2810309 RepID=UPI001A9577D2) HSP 1 Score: 149 bits (375), Expect = 6.460e-38 Identity = 86/212 (40.57%), Postives = 125/212 (58.96%), Query Frame = 1 Query: 1 CGGSIDVHIVDAITHQPVAA---TVITANGVAVGITDEDGHFLVGKLCQGTVAIEA-TRGDYATEQVDVAVDVGKTSLELEMRPANGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRLLK 624 C I+ + D+++ PV +VITAN A ITDE GHF + K+C+G V + T G ++V V SL L+ E V I + + + + +T LE++RG + +D L VPGVS L++G+ + KP+V+G RLL+L +G+R Q+WG++H PE+DPFIA ITV++GA GVRYGP+AI G +LV P L K Sbjct: 25 CRLKIEGSVRDSLSGLPVHGVLISVITANRTA--ITDEHGHFSINKICEGPVILVVNTPGFRPYKKVFSRVSEQSVSLLLQKAELKLEEVHITAGKPFSGTVNIAGSITANQLEQSRGGTLADALRSVPGVSTLQTGSSIAKPVVQGLHSNRLLILNNGIRQEGQQWGMEHGPEIDPFIAQSITVIKGAEGVRYGPEAIAGVILVKPAALPK 234
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: UPI001A9594E4 (TonB-dependent receptor n=1 Tax=Pedobacter sp. SYSU D00535 TaxID=2810308 RepID=UPI001A9594E4) HSP 1 Score: 147 bits (372), Expect = 1.640e-37 Identity = 75/211 (35.55%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 1 CGGSIDVHIVDAITHQPVAATVITAN-GVAVGITDEDGHFLVGKLCQGTVAIEATRGDYATEQVDVAVDVGKTSLELEMRPA--NGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRLLK 624 C ++ ++D+++ + V I + G +DE GHF + C G + T Y + ++ + G L L+++P N + V + + A + ++T V+G+ LE+T+G + +D L VPGVS L++G + KP+++G RLL+L +G+R Q+WG++HAPE+DPF+A +TVV+GA G+R+GP+AIGG +LV P L K Sbjct: 25 CRFPVEGLVIDSVSREAVPGASIRMDAGNKTSFSDEHGHFSFNRGCSGKAVLTVTALGYQPYRKELVIG-GPLELTLQLQPTRLNLQEVEVRARKPAAPGVNANTTVSGQQLEQTKGGTLADVLKSVPGVSTLQAGATITKPVIQGLHSNRLLILNNGIRQEGQQWGMEHAPEIDPFVAQSVTVVKGAEGIRFGPEAIGGVILVKPSALPK 234
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: A0A142HEB0_9BACT (Uncharacterized protein n=2 Tax=Hymenobacter TaxID=89966 RepID=A0A142HEB0_9BACT) HSP 1 Score: 147 bits (371), Expect = 2.450e-37 Identity = 79/210 (37.62%), Postives = 124/210 (59.05%), Query Frame = 1 Query: 1 CGGSIDVHIVDAITHQPVAATVIT-ANGVAVGITDEDGHFLVGKLCQGTVAIEATRGDYATEQVDVAVDVGKTSLELEMRPANG---EVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRSGNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLVTPPRL 618 C ++ + D T +P+ TV+ A A D DGH+ +LC G + AT YA + + V V T+L+++++ A G EV + + TR + +S T +TG AL++TRG + + L + GV +++G + KP++ G +G R+L+L +G+R Q+W DHAPE+DPF A +TV++GAA +RYG DAIGG +LV P L Sbjct: 44 CALNLAGRVTDQRTGEPLPGTVLRLAETSAAEAADADGHYHFHQLCAGQYHLHATFVGYAEQVLTVTVRGSVTTLDIKLKAAAGQLGEVRVEGAKETRPLISQSQTTLTGRALQQTRGLNLAAALQGITGVYSIQTGPTIAKPVIHGLYGNRVLILNNGVRQEGQQWANDHAPEIDPFTATRLTVIKGAASIRYGADAIGGVVLVEPAAL 253
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Match: A0A2S9Y859_9DELT (Putative TonB-dependent receptor n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9Y859_9DELT) HSP 1 Score: 144 bits (364), Expect = 2.240e-36 Identity = 75/177 (42.37%), Postives = 112/177 (63.28%), Query Frame = 1 Query: 97 TDEDGHFLVGKLCQGTVAIEATRGDYATEQVDVAV-------DVGKTSLELEMRPANGEVVLIAGERTRAIDMRSSTEVTGEALERTRGRSFSDTLADVPGVSQLRS-GNGLGKPIVRGQFGRRLLLLVDGLRHRSQEWGLDHAPEVDPFIADGITVVRGAAGVRYGPDAIGGALLV 603 ++ DG V LC GT+ + ++ ++A+ ++VAV DV T +ELE + +I ++ +S + G L R RG+ +DTL+++ GV+ LR G+GKPI+RGQFGRR ++VDG+RH QEWGLDHAPEVDP+ A ITV++GA +R+GPDA+GG +L+ Sbjct: 62 SERDGRVEVTGLCPGTMRVRVSKAEHASLALEVAVEVPQRQADVEPTIIELEGLHDHHSAHVIVIHDESPTNVAASESLAGAELARARGQGLADTLSNMSGVTTLRGPAGGMGKPIIRGQFGRRNAIVVDGVRHEGQEWGLDHAPEVDPYAAGRITVIKGAGTIRFGPDAVGGVVLL 238 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103176.672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103176.672.1 >prot_M-pyrifera_M_contig103176.672.1 ID=prot_M-pyrifera_M_contig103176.672.1|Name=mRNA_M-pyrifera_M_contig103176.672.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp CGGSIDVHIVDAITHQPVAATVITANGVAVGITDEDGHFLVGKLCQGTVAback to top mRNA from alignment at M-pyrifera_M_contig103176:29..652+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103176.672.1 ID=mRNA_M-pyrifera_M_contig103176.672.1|Name=mRNA_M-pyrifera_M_contig103176.672.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig103176:29..652+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103176:29..652+ >mRNA_M-pyrifera_M_contig103176.672.1 ID=mRNA_M-pyrifera_M_contig103176.672.1|Name=mRNA_M-pyrifera_M_contig103176.672.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig103176:29..652+ (Macrocystis pyrifera P11B4 male)back to top |