mRNA_M-pyrifera_M_contig13370.5938.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13370.5938.1
Unique NamemRNA_M-pyrifera_M_contig13370.5938.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: D7G870_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G870_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 5.670e-126
Identity = 206/314 (65.61%), Postives = 245/314 (78.03%), Query Frame = 1 
Query:    4 YVLKRMADFERHPSVTEQAVSNTWKIALALFINSACVVLLVGISESISS-ASVDASTA-RSARQTADNAEWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAA--------------AAVYDGRIVKVAVQAMPWMLVCHCLFALFAYSGDAFFASDQLSDILSSSVQEKFGSTD--QTSTGSTAQSLRIICVPYIIIPALVALHALLTSTVGRLFRLWWSALTCKCLR 891
            +VLKRM  +ERHPSVTEQAVSNTWKI+LALFINSACVVLLV +  S +   S +A TA + A ++A+  EWYT TGQALITTIAINV APR PDLVE+F LGPWRRR A+A+S ITQRQLN+ WKGRNFDLS+RLPITLMM+AVA+TFSPALPVLFPMVAVYL++TYFGDKF+LLR C  PPQVRS                   YDGRIVKVA  AMP MLVCHC+FA++ +S   FF SD ++D+LSSSV +        Q +T S  +S++++C+PYII+PAL+AL+AL TSTVGRLFRLWWSA+TCKC R
Sbjct:  487 WVLKRMGTYERHPSVTEQAVSNTWKISLALFINSACVVLLVNLPNSFTLFGSENAMTAAKLAAESAEGVEWYTTTGQALITTIAINVFAPRLPDLVEHFALGPWRRRPAAASSVITQRQLNRDWKGRNFDLSARLPITLMMLAVAVTFSPALPVLFPMVAVYLVATYFGDKFYLLRACCTPPQVRSQRIRFLKYFEQRGEPQTTTYDGRIVKVAAHAMPMMLVCHCMFAIYVFSAGTFFESDYVADVLSSSVDDNLSGDGGAQGATRSATKSVKLLCLPYIIMPALLALYALFTSTVGRLFRLWWSAITCKCFR 800
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: A0A482UFI0_9ARCH (RSN1_7TM domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UFI0_9ARCH)

HSP 1 Score: 102 bits (253), Expect = 1.670e-20
Identity = 71/263 (27.00%), Postives = 126/263 (47.91%), Query Frame = 1 
Query:    7 VLKRMADFERHPSVTEQAVSNTWKIALALFINSACVVLLVGISESISSASVDASTAR--SARQTADNAEWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRIVKVAVQAMPWMLVCHCLFALFAYSG-------DAFFASDQLSDILSSSVQEKFGSTDQTSTGSTAQSL 768
            +LK +A FE H  V+    +  WK+ L+LF+N+AC+ L++  +   S+A ++ +  R  S R +  +  W+   G  ++ T+ IN+V P    ++ +  + P RR +     A+TQ  LN  +   NF++ +R  + +      + +S   P+L P+ A   + +Y  DK+ +LR+   PP        ++D  +   AV  MPW ++ H   A++ YS          F AS   S I+ S +    G    ++  S A  L
Sbjct:  438 LLKFIAGFEGHRFVSGMQRAVAWKVFLSLFLNTACLALIINAALPGSAAELEVAGTRLFSGRYSGFDVRWHVSVGAGIVLTMLINIVTPHMFSIMRFLCVMPCRRLTGDKR-AVTQVDLNSRFTPPNFEMPTRTAVVMNTFFSCLMYSAGHPILLPIAAAAFIVSYVVDKYAILRMYRRPP--------MFDHAMADFAVSLMPWGVMIHLAVAIWMYSDPNVMYSPSVFAASSDASAIVGSDISSTLGGLFASAESSDASGL 691
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: A0A812T674_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812T674_9DINO)

HSP 1 Score: 94.4 bits (233), Expect = 7.840e-18
Identity = 72/215 (33.49%), Postives = 114/215 (53.02%), Query Frame = 1 
Query:   85 LALFINSACVVLLVGISESISSASVDASTARSARQTADNAEWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRIVKVAVQAMPWMLVCHCLFALFAYSGDAFFASDQ--LSDILSSSVQEKF 723
            LALF+N+  +VLLV  +    + S+     R A  ++ +  WY+  G A+  T+ IN+ AP A  L +Y  + P +RR  S  SAI QR+LN  +K   F++ SR+P  +  + V + +S  +P+L P+ AV L++TY  D F L      PP + ++ A        ++A   MP+ L+ H  FA++ Y  DA   SD   L D     VQ+++
Sbjct:  500 LALFLNTGLIVLLVH-ARIPGAESLPLGVLRGA-YSSFSPGWYSTAGAAVTLTMIINIAAPHALPLGKYCCVYPCKRRCCSK-SAILQRELNDFYKAPEFEVESRVPHVMNTVVVTLLYSSGIPLLLPVAAVSLLTTYLVDVFLLSTFYAQPPPLNASMA--------QLAFNIMPFALMAHSAFAIWFYGDDATVESDPVLLGDAGGVGVQDRY 703
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: D7FXS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS7_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.880e-15
Identity = 57/192 (29.69%), Postives = 98/192 (51.04%), Query Frame = 1 
Query:    7 VLKRMADFERHPSVTEQAVSNTWKIALALFINSACVVLLVGISESISSASVDASTARSARQTAD-NAEWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDG 579
            V+ ++A FERH S+++   + T K+ALA F+N+A +V++V    +             A +  D    WY   G A+  T+ INVV P A  LV   ++ P +R      S  TQ Q+N  +K   FD+ SR    L ++ V++ +S  +P+L+   +    + +  DKF ++++   PP   +A A ++ G
Sbjct: 1056 VMGKLAKFERHVSLSDFTSTVTAKLALAQFLNTALIVIIVNAGYTGGGLGFLQDLGVLAGEYNDFERSWYATVGVAVAMTMLINVVVPHATTLVGEIIVNPVKRLF-KRRSVATQAQMNSLYKPPKFDMESRYAFLLQVLGVSLLYSGGIPILYLFASFSFATNFVVDKFWIIKLAQQPPMYTAALAKMFVG 1246
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: A0A1R2CQV4_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CQV4_9CILI)

HSP 1 Score: 79.7 bits (195), Expect = 6.240e-13
Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 1 
Query:  205 EWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRIVKVAVQAMPWMLVCHCLFALFAYSGDAFFASDQLSDILSSSV 711
            EWY   G  L  TI +++ +P A +LV ++ L  W +R        +Q +LN  ++G NFD+S  L   L ++  +  +S  +P L  + ++ L+ TY+ +K  LLR    PP        VY   I    ++ MP+ ++ HC FA++AY     F +      LSS V
Sbjct:  524 EWYDDVGNTLTVTIIVSIFSPHAFNLVFFYPLS-WFKRKLFYRCFKSQYKLNIFFRGPNFDISDSLSQILAVILTSFMYSSGIPFLNFLCSLTLLLTYWANKILLLRYYKTPP--------VYSFNINSNIIKFMPFAVIFHCAFAIYAYGSSEIFPTHYTKPELSSFV 683
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: A0A1R2B7R1_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B7R1_9CILI)

HSP 1 Score: 76.6 bits (187), Expect = 5.130e-12
Identity = 48/156 (30.77%), Postives = 77/156 (49.36%), Query Frame = 1 
Query:  205 EWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRIVKVAVQAMPWMLVCHCLFALFAYSGDAFF 672
            EWY   G  +  TI +++ +P   DLV  + L   +RR        +Q +LNK ++G NFD+S  L   L ++  +  +S  +P L  +  + L  TY+ +K  LLR    PP        VY   I    ++ MP+ ++ HC+FA++AY     F
Sbjct:  201 EWYDDVGNTITVTIIVSIFSPHVFDLVFLYPLSKLKRRVFYKCFK-SQYKLNKFFRGPNFDISDSLSQLLAVIFTSYMYSAGIPFLNILCGMMLFVTYWTNKILLLRYYRTPP--------VYSHNINNNILKFMPFAVIFHCIFAIYAYGSSEIF 347
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: A0A7S1U004_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U004_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 7.770e-12
Identity = 56/203 (27.59%), Postives = 102/203 (50.25%), Query Frame = 1 
Query:    1 QYVLKRMADFERHPSVTEQAVSNTWKIALALFINSACVVLLVGISESISSASVDASTARSARQTADNAEWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAIT--------QRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRI 585
            +Y+L+R+  F+R  S   +A +    + +A F+N+A + ++V I         + +  +       N +WY   G  ++ ++ + V+   AP L++ +V    +R+  +AA+AI         Q  LN    G+ F++S R    L++   A TF  A+PVLFP+V V L+ T++ D + LLRV   P +      ++ +G I
Sbjct:  130 EYILRRLTKFQRRTSNDREASTLMGLLFIAEFVNTAFIPVMVYIR-------FEGAPFQDGNFEDFNNDWYAEVGTTMVLSLIVVVLTQHAPRLIKMWVR---KRKFKNAAAAIKKGDPKVAMQADLNHLLVGKKFEISERYAFVLLITLYAFTFGGAIPVLFPVVFVALIVTFWVDWYFLLRVSEKPARRELEMQSIANGTI 322
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: A0A1R2CQW7_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CQW7_9CILI)

HSP 1 Score: 76.3 bits (186), Expect = 9.000e-12
Identity = 46/156 (29.49%), Postives = 78/156 (50.00%), Query Frame = 1 
Query:  205 EWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRIVKVAVQAMPWMLVCHCLFALFAYSGDAFF 672
            EWY   G  +  TI +++ +P A +LV ++ L  W +R        +Q +LN  ++G NFD+S  L   L ++  +  +S  +P L  + ++ L+ TY+ +K  LLR    PP         Y   I    ++ MP+ ++ HC FA++AY     F
Sbjct:  524 EWYDDVGNTITVTIIVSIFSPHAFNLVFFYPLS-WCKRKLFYRCFKSQYKLNLFFRGPNFDISDSLSHILAVILTSFMYSSGIPFLNFLCSLTLLLTYWANKILLLRYYKTPP--------AYSFNINSNIIKFMPFAVIFHCAFAIYAYGSSEIF 670
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BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: A0A1R2CNR3_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CNR3_9CILI)

HSP 1 Score: 67.4 bits (163), Expect = 8.140e-9
Identity = 57/230 (24.78%), Postives = 112/230 (48.70%), Query Frame = 1 
Query:    7 VLKRMADFERHPSVTEQAVSNTWKIALALFINSACVVLLVGISESISSAS--VDASTARSARQTAD-NAEWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWR--RRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRIVKVAVQAMPWMLVCHCLFALFAYSGDAFFASD 681
            + KR++ FER  + T++ ++   K+ +A FIN+A ++L+V  +    SA   +  +      + +D   EWY   G++L+ T+ + + +P    L+   ++ P+   +R        TQ+ LN+S+ G  FDL+ R    L ++     +S  +P L  +  V L   Y+ DK  +LR    PP        +    +   A++ +P +++ H  FA+  Y  ++ F ++
Sbjct:  565 IFKRLSKFERVSNKTKEQLNIMVKVFIAQFINTALIILIVNANFDKVSAIYYIPYTKMIFTGEFSDFTREWYVNVGESLVFTMIVCIFSPH---LLTLMIICPFNYCKRRCFYKLYKTQKSLNRSYAGPEFDLACRNSQVLNLIFTCYLYSSTIPFLNIIATVALFVLYWTDKILVLRHYRKPP--------LLSYHLNNAAIKFIPIIIIIHSCFAIHMYGSESVFPTE 783
[Close]
BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Match: A0A8J4FVX7_9CHLO (Uncharacterized protein n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FVX7_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 8.740e-9
Identity = 39/150 (26.00%), Postives = 76/150 (50.67%), Query Frame = 1 
Query:  208 WYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRRSASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFPMVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRIVKVAVQAMPWMLVCHCLFALFAYS 657
            WY   G +++  + INV  P    L++  +L   R           Q   + +W    F L+ R+   L+ +++A+ F   +P+L+ ++AVY+M++   D++ L R+C   P+        Y+  ++K+ +  +PWM V HC F L+ ++
Sbjct:  649 WYENVGLSILILMIINVSGPLLNLLLDEALLIARRCWVLYCIKWPLQSDYDVAWSRPRFTLAQRIADLLLNVSLALLFGSGMPLLYLVLAVYVMASELADRWALTRLCRGAPR--------YNTGLMKLVMALLPWMAVAHCAFGLWMHT 790
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13370.5938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G870_ECTSI5.670e-12665.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482UFI0_9ARCH1.670e-2027.00RSN1_7TM domain-containing protein (Fragment) n=1 ... [more]
A0A812T674_9DINO7.840e-1833.49Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
D7FXS7_ECTSI1.880e-1529.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1R2CQV4_9CILI6.240e-1330.77Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A1R2B7R1_9CILI5.130e-1230.77Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A7S1U004_9STRA7.770e-1227.59Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1R2CQW7_9CILI9.000e-1229.49Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A1R2CNR3_9CILI8.140e-924.78Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A8J4FVX7_9CHLO8.740e-926.00Uncharacterized protein n=4 Tax=Volvox reticulifer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13370contigM-pyrifera_M_contig13370:650..7320 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.4
Seed ortholog evalue1.5e-102
Seed eggNOG ortholog2880.D7G870
KEGG rclassRC02795
KEGG koko:K03015
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG ModuleM00180
Hectar predicted targeting categoryother localisation
EggNOG OGs28SCF@1,2QZ1Z@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_001270.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03019,ko03021,ko03400
Exons5
Model size894
Cds size876
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13370.5938.1prot_M-pyrifera_M_contig13370.5938.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13370 668..7320 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815815.344421-UTR-M-pyrifera_M_contig13370:649..6671622815815.344421-UTR-M-pyrifera_M_contig13370:649..667Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13370 650..667 +
1692277584.4850554-UTR-M-pyrifera_M_contig13370:649..6671692277584.4850554-UTR-M-pyrifera_M_contig13370:649..667Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13370 650..667 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815815.355958-CDS-M-pyrifera_M_contig13370:667..7961622815815.355958-CDS-M-pyrifera_M_contig13370:667..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 668..796 +
1692277584.4984255-CDS-M-pyrifera_M_contig13370:667..7961692277584.4984255-CDS-M-pyrifera_M_contig13370:667..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 668..796 +
1622815815.3685658-CDS-M-pyrifera_M_contig13370:1687..19131622815815.3685658-CDS-M-pyrifera_M_contig13370:1687..1913Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 1688..1913 +
1692277584.513243-CDS-M-pyrifera_M_contig13370:1687..19131692277584.513243-CDS-M-pyrifera_M_contig13370:1687..1913Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 1688..1913 +
1622815815.38249-CDS-M-pyrifera_M_contig13370:4353..45501622815815.38249-CDS-M-pyrifera_M_contig13370:4353..4550Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 4354..4550 +
1692277584.5228424-CDS-M-pyrifera_M_contig13370:4353..45501692277584.5228424-CDS-M-pyrifera_M_contig13370:4353..4550Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 4354..4550 +
1622815815.396979-CDS-M-pyrifera_M_contig13370:5886..60301622815815.396979-CDS-M-pyrifera_M_contig13370:5886..6030Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 5887..6030 +
1692277584.5311246-CDS-M-pyrifera_M_contig13370:5886..60301692277584.5311246-CDS-M-pyrifera_M_contig13370:5886..6030Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 5887..6030 +
1622815815.4135327-CDS-M-pyrifera_M_contig13370:7140..73201622815815.4135327-CDS-M-pyrifera_M_contig13370:7140..7320Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 7141..7320 +
1692277584.5395155-CDS-M-pyrifera_M_contig13370:7140..73201692277584.5395155-CDS-M-pyrifera_M_contig13370:7140..7320Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13370 7141..7320 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13370.5938.1

>prot_M-pyrifera_M_contig13370.5938.1 ID=prot_M-pyrifera_M_contig13370.5938.1|Name=mRNA_M-pyrifera_M_contig13370.5938.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
MADFERHPSVTEQAVSNTWKIALALFINSACVVLLVGISESISSASVDAS
TARSARQTADNAEWYTVTGQALITTIAINVVAPRAPDLVEYFVLGPWRRR
SASAASAITQRQLNKSWKGRNFDLSSRLPITLMMMAVAMTFSPALPVLFP
MVAVYLMSTYFGDKFHLLRVCHVPPQVRSAAAAVYDGRIVKVAVQAMPWM
LVCHCLFALFAYSGDAFFASDQLSDILSSSVQEKFGSTDQTSTGSTAQSL
RIICVPYIIIPALVALHALLTSTVGRLFRLWWSALTCKCLR*
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mRNA from alignment at M-pyrifera_M_contig13370:650..7320+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13370.5938.1 ID=mRNA_M-pyrifera_M_contig13370.5938.1|Name=mRNA_M-pyrifera_M_contig13370.5938.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6671bp|location=Sequence derived from alignment at M-pyrifera_M_contig13370:650..7320+ (Macrocystis pyrifera P11B4 male)
CAGTATGTTCTGAAGCGAATGGCGGATTTCGAAAGGCACCCGTCGGTCAC
CGAGCAGGCGGTCAGCAACACGTGGAAAATCGCGCTGGCGCTCTTCATAA
ATTCGGCGTGCGTCGTTCTCCTCGTCGGCATTTCAGAGTCTATTTCGGTG
AGCGCGAAGTGATCAAGACGGACACGGTAGGCAGGGGACGGGGGGGAGGG
GGAAGGGGGACGGGGGACGGGACGAGGCGGGACGGGACCCCCGGTGTGTT
TTACGGAGGCGCTTGCGTTTGCAGTTCCATTCGTGATCCTCGTTCTGCTT
TGTTTTGCCGGGAGGCTTCGCGTATATACAATGATAATGATACCCCGTGT
TTCGGGTGCAGAATGGAGAAAAAGTCACCCGTCGTCACGAAACCTGAAAA
ACATGCAAGATTTATGCATCTTCAAAGCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCTACCCACACCCCTTCCCCTTTCCCCTCGTCCC
CCCCACCCCCCCCCCCCCCACCCCCCCCCAACCACAACACACCACACCAN
NNNNNNNNNTAATGATCCCCCGGGTTGTTGGGTGAGAAGGGGGAAGAAGT
CCCCCCCCCCCACCCCCCCGGAAAACCCGGCAGTATTTTTTCTCCTTCCT
CGCCCCCCCCCCCCCCCCCCCCTCCCCCCGCCCTTTTCTTCCTTAGTTCC
TCTCTTTTCCTCGCTAGGCCACCTCGATAAGCCGCCGTTAACCCCCAAAA
AACACATGCTCATCATGTCACCTGAAGGTCAACACAAGCAAACCTCATGA
TGACGGTATACGAAGTATTTTCTTACGTGTCACATTCGTTGTTTTTCGCT
TTTTTTCGTATGCTTTCGCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
TGACATAACGTGTCACATATTCGCTGTTTTTCGTTTTTTTTCGTGTGTTT
TCGCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCACATA
ACTTCTGATGGCGTCGGCACGCTACACATAACAAACAGTCCGCGTCGGTC
GATGCCAGCACGGCGCGTTCGGCGAGGCAGACCGCCGACAACGCCGAGTG
GTACACGGTGACCGGTCAGGCCCTGATCACGACGATCGCCATCAACGTCG
TCGCCCCCCGTGCGCCGGACCTGGTGGAGTACTTCGTCCTCGGCCCTTGG
CGGCGGAGGTCGGCCAGCGCCGCGTCCGCCATAACACAGAGACAACTCAA
CAAGAGCTGGAAGGGTGAGTAGTGAGTAAATAAGCCGTTTTTTGAAGCCG
CTGGCTGTCGAGACAACTCGCAGGCACCACCCAGCCAGCCACCCACCCAC
CCAGCCAGCTCGAACCAAAACTAAGCCGTTGTTTTAAGCTCAGGCTTTGT
AAGATAGACTTTAACGCACCATTCCGATCTGCGCTCGCATTAATAGATCC
ATGCTATTATATGATAATATGAGGGGTGCGACTACAGTGACTTTTTTTTT
TTTTTTTCTGGGGGCACCTGCCGACTTGACGAGCTCTACGTGTACCACTC
TGAGGGTGATTTCCGTATTAGTGCATACGTGGCCCTTATATCTCCGCTCA
GAGCGGTGTAGACATGCGTCACCCAGGCAGGGACTCAGACGAAATCATGG
AAGTGCGACCCGATGGCCTCCTCGGTACACAACGGACGAATAACAGGTAA
AACAAAACAAATATATATATATATATATATATTTTGTTTCCTCAGGCGGA
TTAGTAAAAATAAAGCTTAAGCTCACCACACTTCCACGTTCGCGATTTCG
TGTCAATAAATTTGTGTTCCAACGATGAGGGGTGCCTTTTTGGAGTGGAT
ATAGGGCATGCCTTAGCGAGTAAAAAAGACAATTGCTGTTCGAACGACAA
GGCATGGCTTATTTTGATAGCAAAGGCGTATCATGTGTATCCCTCCTCGG
ATGAGGAACGAACGCCTCATTAGATAAGGAATGCCTTGTCCGTGCCTTGT
TGGATAGTGAATGGCTTATTGGATGAGGCACAGTAAGGCGTGCCTTGTTG
CACAAGACATGCCTCATCACGGAGCCCTGGAAGTCAGAAATAGTATGCCA
AAAAAAAAAAAACACACTGCTTCTATCGTAGGTAGCCGTTGCTGCGTACA
AGAGTGTGACGAGGGGCTCGCGTAGCCCCACCCGAAAACACAAGCACCCG
TTATGCAGGGTTTGTTATATGCCAGGCACAATAATGTTGAACCGGCGCTC
AAAATGCTTCCAACATGTTCGTGTACCGTGGTATATATAGTCGGATGGAA
GGAAGGAAGGAAGAAAGGAAGGCCTCACAACCTGGAGCGAGGCGCACGCA
TACAGTCACCCTACCTGAAAAAAAATGCGATTGTACTGTAGTCCAGAGAT
TAGCTGGTTTCATTTCCTGTGCGTTTGGGCGACAGGCGAATACGCATGCC
CTACGCCACGGCTTTCTTGCCTTTTGTTCGTGTTTCGGAAATTTCAGCAC
ATTTGGCTACTTGCAGATGAAGCATGTTGGGAACTGAATGTGCCGGCTTG
TGCACTTTGGTGCTAATCGTTTGAGCTGGATTATTCGACACGTGCCGTTG
TTCCTGCGCAGTTTTGGACACTGGTGTGTTGTGGCCCTGGTAGCAGTGGG
TGGTAGAAGGAGATTCGCCACCAGTTGGGCTTCGGCATAAGTGAGTCGTT
GTGCGGCTGCTCACTCCATCACTTTTACCGTTCGTCGCCTCACGGCCCAG
TCGTGAAAAACGATGCACGGAGTTCCCTTGGTGGTCTGTCTTGTCTTCCA
GGGCTTACAATTTCCGAGTTTTGTCCGACATCATCTCGCTCCCCAGGAGT
ACTTCCTCTTTTATCCCCTCTTGTCGTGTCTTTTTGACTGTTAATAGCGG
TAAGCATGGCCTGATTAGGCCGCCTCCGAGCCGCAACAGTCCCGCCCAAG
CGTTCCGCTGGGGCGCCAAATAAGGCAACTTGAGCTATACGTAGGTGTGG
ATTCATGAATCGTTTAGTTTAAGGAGCCGATGTACAAACGGGTATCACTT
AGCCCCCTCGATGCCTGCGCGCAAGATGTCGTCGGAGTGGCGGCCCTGAA
CCGGAGCTTTGTGGATGCTGTTCAAAATAAATCCATGCCACAAACATCGA
TTTCTACCCGTCTCTCGGATTATTAGATGCTGCTTGTACGTATACACGTA
CAGCATCAGACTATGTATCCTTCTGTCTACTTTCGCGTTTGTGTGTTGTT
GTTGTACCTTTAGCCATCTACGGTTTCTTGTCCATGCCGTGGGGGGAAGG
TACCCACAACTCGGACAGACGACGATGGTTGCGAACTGCTGTGCAGGATC
TGTGTAGTGCGTATCCAACCAAAGAACCATGTGCAACATCAGATCGTACA
GATCACACGGGTTTTCACCCGCCAACGTGAGATATTATTAGTAGATCGTA
CTCGTACTCGTACTCGTACTCGTACATATCAGAGATATATCTTCCCCTGA
AATGTCTGGATGGGGGATCTATCCGACCGTGGTCTGGGATATTTGTTCTT
TCGTCTTGTTTTTGGCTGATGGCACCCACGCTACGTGCACATAGTCGGAT
GGTGAATGAAACAACAACGGGTCAGGTATCCCCAAAACGTGAACAGCAGT
GCTCTCGTTTTTTGTTTGTTTCCTCTTCTTCTTCTTCTTCTTCTTTGCTC
ACAGGGCGAAACTTCGACCTTTCGTCGCGTCTCCCCATCACCCTGATGAT
GATGGCGGTGGCCATGACCTTCTCCCCTGCCCTCCCGGTGCTCTTCCCCA
TGGTCGCCGTCTACCTCATGAGCACGTACTTCGGGGACAAGTTTCACCTC
CTTCGGGTCTGCCACGTGCCCCCCCAGGTTCGAAGTGCAGCAGCAGCAGT
AGTGGCCCCCCAATAGTGCCGGTTGTGTACCTGAATAACACGCGAGATTC
TAACACGCCCCCTCGGACGATTTTCAAAGTTGGGTTTCTCGACAACGGGG
ACGGCGTACTAAGTACGACGAGCGATGCGTCTATGTAACCTTCTCGACGA
AAACTTTCCAGAGCCGTCATTTTCGTTGCGTGTGTGTGCCCTCCATGTTT
TGGAGGAAACCGGACCTGAAATTCGTCTCACTGAGGGGTTTGTTATCTTG
TCACCCAGTGTGATTCGGTAGTGCCGGCTGCCCGCTGCAGTGCCTCTTGG
AATCGCTTGGCACAGATGGGATTGACCAGTGGGGCAGTAGTGTGTGCGGA
GTAGTTGGTTGGTGCCGGTTGTCGCTATATAGTGCCGGTATCATTGGCTG
GCGCATACAAACCGGCAGTGTTGTGGAGGGACCTTTTCTGTAGGAAAAAA
ATGAAACGTTTTGATACCGACCCACCTGGTGTGCGGGGATAGCTTGGTGA
AGCGAAACGACGGCTGCGGCTGGTCCCGGCAGCGTCCTTTGGCTTGGTTG
GTTCCATGAACTTCTTGTTAGGCAGAAGGCCTCTTGGGGTGGACCAGTAT
CTGCCGTTTCTGTAGAAGAACGCTGACACGACCTGTACTGACTTGCCTTG
GTAGGATGGATGTGGAGGCATTTCCAACAAAGGTGCGGGCGTTGTGGACG
GTGTACGTATTCAATCCCGCGCGGCCTGTTAACTCGAAATGTTTGTGTAC
GTTAGAAGTTCACGTGCAGACTGCTTCTTCAGGTATAAAAGAATGAGCAA
ATACCCCAACACAAATATCAATTGTCTCGGTTGAGTACAAGGGTTTGAGT
ACAAACCTAACACATGACTCAGTCGGCTGTGTACTGTACAAGAAACAAAA
AATGACCGAGCAAACGTAACAGATGAATCGCCTCTATGTAGCGTGGTGAA
TGAAGTCTCGACGTTCGTAGTACATCCCTTCGCTTTTGACCGGTACGACG
GATAATAAGGCAGTCAATCAATCCTGCCGTGTAACTGGGTACCAATGGGG
TTCGTAAGTTTGCGTTCCGAGACCCTTGCCGTCTCTCCGCCTCCACGGCT
GTGATATCGCTTTCGTCCCGCGAAAATCCTAACGATCGCCTAATATGAAC
AACCCAGCTCTCCAACGAAATATATTCGGTGTCCCTGCTCTCCCTGATTG
CTTCGCCCCAAATACGTTCGGTGTGTCTGCTCTGCTTGATCGGCTGATTT
TTCATCATTAGTGCGACGGCCTAAATATGTTCGGCGTGCCCACTCCGCTT
GTTTGATTGATTGCTTGGTTCTGCCGCCGTTACGTAGTACGACGGTCGAA
TCGTCAAGGTTGCGGTGCAAGCAATGCCGTGGATGCTGGTGTGCCACTGC
CTGTTCGCCTTGTTTGCCTATTCGGGCGACGCTTTCTTCGCGTCGGACCA
ATTGTCGGACATACTCTCGTCAAGCGTTCAGGTGTGTGTGAGAGAGAGTG
GGTGGGTGGGTGGGTGGGTGGGTGGGAGAAAAAAAACCAAAGAAACAACG
AGCCAAACAATGTTGAAGCCATCCTAAATTTAAGGTGTTGAATAGCTTCT
ACCTCCGAAGCACGCATGGTGTGGGGACAGAGATACTCGCCGCCGCCGAG
ATCGAGCGTTGCGACGTCTGCTAGAATCGACAAACTCGAAAACACATAGT
TTGTAGGTTAATACAGCACTACCCAGTGGCCAACACGGTCACGTGACTAT
TATTAACAATAGTGCTATATAACCAACAACACAGCAGTAGTCGAATAATT
CGTTTTTCGTGTAATCGGGTTTAATATATATATATCAATTCATACAATAA
TTCCCACCTCCGACATAAGAGAAACGGAGATAGAGAGAGATAGAGAGAGA
TAGAGAGAGATAGAGAGAGAGGATAGGCTTCGGTTCCGGTGCTTGGGGGT
CCGAAGACTGTGTACGAGCCCCGACAGGCGTTTTGGCGGACGCGAAGTGT
GTGGGGCTCCTAATCTTCGCAATTTTCCCACAAACGGTGCGCTTTGTTTG
TATGTAGCAAATGGATGGGATTCTTAAGGTTCATCATGGTCCCGAAAACA
GGCGAGGATGTGTGTATGAGTGCTCTGGTCCTGTAGAATACCCTGTAGCG
AGCGCCAAAGGACCATTGTGTGCGTGCGTATCAGTTTCGTGCGGTCCTCC
CTTTTTACTCTGCTTCGAGAGGAGCTTTGATAGCAATATTATTTATGTAT
ATATGTTTACTCGACATTGATATGACGATGGCGGGAATGCCTACGTTAGG
TTTCCAGCTGCTGTTTTCTGATCATGGTTAGCGCAGCATGCGAGGTGCGA
CGCACTGTAAATTTCACGATCTTGATGAGCACAGGCTGCGCCTTTTCTGG
TACTCGACCACAAGGCCAGTGTTGCGACGACATCGGTCGGGCACGCGATG
TAAACTTCCTGAAAGACAATAATACAATGAAACAGAGCCATCCCGTAAGA
AGCCACACCGTCGGTTAACTCCGCCCCTCCCCTCCCCCGTTCCGCCCCCT
TCCCCTCCCGCACCTCCGTTTGCCGCCTCGCCGATTCACAGGAAAAATTC
GGTTCGACCGACCAGACTTCAACTGGGTCAACCGCGCAATCACTCAGGAT
CATATGCGTACCGTACATCATCATCCCAGCCCTGGTCGCCCTACACGCAC
TGCTTACGTCGACAGTGGGGCGCCTGTTCCGCCTTTGGTGGTCCGCGCTC
ACCTGTAAATGTTTGAGGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13370:650..7320+

>mRNA_M-pyrifera_M_contig13370.5938.1 ID=mRNA_M-pyrifera_M_contig13370.5938.1|Name=mRNA_M-pyrifera_M_contig13370.5938.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig13370:650..7320+ (Macrocystis pyrifera P11B4 male)
ATGGCGGATTTCGAAAGGCACCCGTCGGTCACCGAGCAGGCGGTCAGCAA
CACGTGGAAAATCGCGCTGGCGCTCTTCATAAATTCGGCGTGCGTCGTTC
TCCTCGTCGGCATTTCAGAGTCTATTTCGATGGCGGATTTCGAAAGGCAC
CCGTCGGTCACCGAGCAGGCGGTCAGCAACACGTGGAAAATCGCGCTGGC
GCTCTTCATAAATTCGGCGTGCGTCGTTCTCCTCGTCGGCATTTCAGAGT
CTATTTCGTCCGCGTCGGTCGATGCCAGCACGGCGCGTTCGGCGAGGCAG
ACCGCCGACAACGCCGAGTGGTACACGGTGACCGGTCAGGCCCTGATCAC
GACGATCGCCATCAACGTCGTCGCCCCCCGTGCGCCGGACCTGGTGGAGT
ACTTCGTCCTCGGCCCTTGGCGGCGGAGGTCGGCCAGCGCCGCGTCCGCC
ATAACACAGAGACAACTCAACAAGAGCTGGAAGGTCCGCGTCGGTCGATG
CCAGCACGGCGCGTTCGGCGAGGCAGACCGCCGACAACGCCGAGTGGTAC
ACGGTGACCGGTCAGGCCCTGATCACGACGATCGCCATCAACGTCGTCGC
CCCCCGTGCGCCGGACCTGGTGGAGTACTTCGTCCTCGGCCCTTGGCGGC
GGAGGTCGGCCAGCGCCGCGTCCGCCATAACACAGAGACAACTCAACAAG
AGCTGGAAGGGGCGAAACTTCGACCTTTCGTCGCGTCTCCCCATCACCCT
GATGATGATGGCGGTGGCCATGACCTTCTCCCCTGCCCTCCCGGTGCTCT
TCCCCATGGTCGCCGTCTACCTCATGAGCACGTACTTCGGGGACAAGTTT
CACCTCCTTCGGGTCTGCCACGTGCCCCCCCAGGTTCGAAGTGCAGCAGC
AGCAGTAGGCGAAACTTCGACCTTTCGTCGCGTCTCCCCATCACCCTGAT
GATGATGGCGGTGGCCATGACCTTCTCCCCTGCCCTCCCGGTGCTCTTCC
CCATGGTCGCCGTCTACCTCATGAGCACGTACTTCGGGGACAAGTTTCAC
CTCCTTCGGGTCTGCCACGTGCCCCCCCAGGTTCGAAGTGCAGCAGCAGC
AGTATACGACGGTCGAATCGTCAAGGTTGCGGTGCAAGCAATGCCGTGGA
TGCTGGTGTGCCACTGCCTGTTCGCCTTGTTTGCCTATTCGGGCGACGCT
TTCTTCGCGTCGGACCAATTGTCGGACATACTCTCGTCAAGCGTTCAGTA
CGACGGTCGAATCGTCAAGGTTGCGGTGCAAGCAATGCCGTGGATGCTGG
TGTGCCACTGCCTGTTCGCCTTGTTTGCCTATTCGGGCGACGCTTTCTTC
GCGTCGGACCAATTGTCGGACATACTCTCGTCAAGCGTTCAGGAAAAATT
CGGTTCGACCGACCAGACTTCAACTGGGTCAACCGCGCAATCACTCAGGA
TCATATGCGTACCGTACATCATCATCCCAGCCCTGGTCGCCCTACACGCA
CTGCTTACGTCGACAGTGGGGCGCCTGTTCCGCCTTTGGTGGTCCGCGCT
CACCTGTAAATGTTTGAGGTAAGAAAAATTCGGTTCGACCGACCAGACTT
CAACTGGGTCAACCGCGCAATCACTCAGGATCATATGCGTACCGTACATC
ATCATCCCAGCCCTGGTCGCCCTACACGCACTGCTTACGTCGACAGTGGG
GCGCCTGTTCCGCCTTTGGTGGTCCGCGCTCACCTGTAAATGTTTGAGGT
AA
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