mRNA_M-pyrifera_M_contig102784.591.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: A0A7Y2N951_9ACTN (RNA methyltransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N951_9ACTN) HSP 1 Score: 164 bits (416), Expect = 1.840e-47 Identity = 97/183 (53.01%), Postives = 117/183 (63.93%), Query Frame = 1 Query: 7 EPGVLDKALDTVSPQPVVAIVE-QSSASLESLPLDRPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIVELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADLGRAVIVLGNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQR 552 +P L A+ T SPQP+VA+ E LESL P+L LV++ DPGN GT+IRTAEA+G AGVV+ G CVD NPK+VR+SAG+ LR PIV + +A L A R + A +V DL AVI LGNEAHGLSP ++ CDAAV IP GPTESLNV A A+LAF L QR Sbjct: 72 DPDRLCDAMGTKSPQPIVAVAEIPEPVRLESLEAG-PLLALVEIGDPGNAGTMIRTAEAAGMAGVVMVGECVDSWNPKLVRASAGAALRLPIVRVSEAE-----LFAAGRRPVVATVVGRGTHYMDTDLSAAVICLGNEAHGLSPGFIDRCDAAVTIPLAGPTESLNVAAAAAVLAFSALHQR 248
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: A0A7X6P568_9ACTN (RNA methyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P568_9ACTN) HSP 1 Score: 164 bits (415), Expect = 3.840e-47 Identity = 101/192 (52.60%), Postives = 121/192 (63.02%), Query Frame = 1 Query: 4 VEPGVLDKALDTVSPQPVVAIVEQS----SASLESLPLD--RPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIVELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADL---GRAVIVLGNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQR 552 V+ GVL L VSPQPV A+ + + +A L +L L+ RP+++LVDV DPGN GTL+R AE+SGCAGV+LAG VD NPKVVRSSAGS R PI PD L L + + AA G + H D G IVLGNEAHGL E + ACD AV I DG TESLNV +AG +LAFE LR+R Sbjct: 82 VQTGVLGSVLSAVSPQPVCAVADTTLVRHAADLWALALETGRPLMVLVDVSDPGNAGTLLRAAESSGCAGVILAGKGVDLYNPKVVRSSAGSMFRLPIAADPDTHGLLGRLRSAGIASQAAVARGG---LGHLDAPLGGPTAIVLGNEAHGLDDETIAACDGAVTITMDGATESLNVAMAGTVLAFEALRRR 270
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: A0A6L6EMF6_9ACTN (RNA methyltransferase n=3 Tax=root TaxID=1 RepID=A0A6L6EMF6_9ACTN) HSP 1 Score: 157 bits (397), Expect = 2.280e-44 Identity = 94/183 (51.37%), Postives = 116/183 (63.39%), Query Frame = 1 Query: 13 GVLDKALDTVSPQPVVAIVEQSSASLESLP-LDRPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIVELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADL-GRAVIVLGNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQRR 555 GVLD DTV+PQ ++A+ + + SLE + PVL+LVDV DPGN GTL+R AEA G AGVV AG+ D PK VR++AGS LR PIVE PD + L R TLA +VSG DL G +++G+EAHGLSP ++E CD V IP ESLNV VAGA++ FE RQRR Sbjct: 95 GVLDSISDTVTPQGLLAVAPRRTTSLEQIAQASGPVLVLVDVADPGNAGTLVRAAEAFGAAGVVFAGTSTDAFGPKAVRAAAGSLLRLPIVEEPDTTVVIDRLRELGRTTLAT-VVSGGAAPESIDLTGPLAVLVGSEAHGLSPVIIEQCDRNVTIPVALSVESLNVSVAGAVVLFEASRQRR 276
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: L7VZL2_9BACT (tRNA/rRNA methyltransferase (SpoU) n=1 Tax=uncultured bacterium A1Q1_fos_862 TaxID=1256590 RepID=L7VZL2_9BACT) HSP 1 Score: 156 bits (395), Expect = 4.930e-44 Identity = 89/190 (46.84%), Postives = 113/190 (59.47%), Query Frame = 1 Query: 4 VEPGVLDKALDTVSPQPVVAIVEQSSASLESLPL-----DRPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIVELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADLGRAVIVLGNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQRRK 558 V GVL K LD SPQ VVA+VEQSS +E++ RP+L LV+V DPGN+GTL+R+AEASGCAG VL G C D NPK VR++AG+ R P E +V + P + G A VIV+G+EAHGL+ + + C V +P +G ESLN VAG+LLAFE RQRR+ Sbjct: 57 VRTGVLAKVLDLASPQDVVAVVEQSSFDMEAVARLAAASSRPILALVEVSDPGNVGTLVRSAEASGCAGAVLVGECADVFNPKAVRATAGAVFRVPTARCDSLAELASVAERAAMPLVGTVGGDGVTPESVAMHAAVVIVVGSEAHGLAEKDLRLCGQLVTVPMEGRVESLNAAVAGSLLAFEAARQRRQ 246
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: A0A7V8YNW9_9ACTN (RNA methyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8YNW9_9ACTN) HSP 1 Score: 153 bits (386), Expect = 2.680e-43 Identity = 90/182 (49.45%), Postives = 114/182 (62.64%), Query Frame = 1 Query: 13 GVLDKALDTVSPQPVVAIVEQSSASLESLPLDRPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIVELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADLGRAVIVLGNEAHGLSPEVVEACDAAVIIPFDGPT-ESLNVGVAGALLAFEGLRQRR 555 GVL++ TV+PQP++A+ + + L+ LP D VL+LV V+DPGN GTLIR+AEASG A VV G+ VD +PKVVRSSAG+ I E D VE LA L A+ R + A G G +VLGNEA GL+P++ E DA V IP GP +SLNV +AG +L FE RQRR Sbjct: 45 GVLERISATVTPQPILAVASRVAQPLDRLPHDGVVLVLVSVQDPGNAGTLIRSAEASGAAAVVCCGNSVDLHSPKVVRSSAGAIFGLAIAEGDDPVEVLAALGARGRRRIGTAAAGGGAPDQLDLTGPIALVLGNEARGLAPDLSEHLDAEVTIPVSGPAVDSLNVAMAGTVLCFEAARQRR 226
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: A0A5Q2RMS3_9ACTN (RNA methyltransferase n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RMS3_9ACTN) HSP 1 Score: 152 bits (385), Expect = 2.340e-42 Identity = 93/187 (49.73%), Postives = 120/187 (64.17%), Query Frame = 1 Query: 13 GVLDKALDTVSPQPVVAI---VEQSSASL--ESLPLDRPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIVELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADL-GRAVIVLGNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQRR 555 GVL DTV+P+P++A+ V +A + ++ RP+L+LVDVRDPGN+GTL+R AEASG AGV+ A VDP +PK VRSSAG+ L P+ + D LA+L LA + +G ADL G +VLG EAHGL +VV ACD + IP +G ESLNV +AGA+LAFE LRQRR Sbjct: 85 GVLAGVTDTVTPRPILAVAPLVRTPAADVVDRAVAAHRPLLVLVDVRDPGNLGTLLRAAEASGVAGVLAAKGTVDPWSPKAVRSSAGAVLHVPVADGDDVGALLALLGDAGVRRLATVVEAGRPSE-DADLAGTVALVLGGEAHGLPADVVAACDDRITIPMEGRAESLNVAMAGAVLAFEALRQRR 270
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: A0A7Y2GQK4_9ACTN (RNA methyltransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GQK4_9ACTN) HSP 1 Score: 149 bits (376), Expect = 7.240e-42 Identity = 92/179 (51.40%), Postives = 113/179 (63.13%), Query Frame = 1 Query: 19 LDKALDTVSPQPVVAIVEQSSASLESLPLDRPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIVELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADLGRAVIVLGNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQRR 555 L L T SPQ + A+ + S+E L LD P+L VD+ DPGN+GT+IRTAEA+G AGVVL GSC D NPKVVR+SAG+ R P+ + + E L S++S P +A + SG + DL A I +GNEAHGLSPE V CD AV IP GPTESLN A A+L F QRR Sbjct: 41 LSSILSTRSPQQIAAVA--TIPSIEPL-LDGPLLAQVDMADPGNVGTMIRTAEAAGQAGVVLVGSCADKWNPKVVRASAGASFRMPVSQCTE--EEL--FSSRSTPVVAT-VPSGGSDYHAVDLRNATICIGNEAHGLSPEFVSRCDDAVTIPLAGPTESLNAAAAAAVLVFAARDQRR 211
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: UPI001D11963B (RNA methyltransferase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D11963B) HSP 1 Score: 152 bits (383), Expect = 7.440e-42 Identity = 91/190 (47.89%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 4 VEPGVLDKALDTVSPQPVVAIVEQSSASLE-----SLPLDRPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIVELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADLGRAVIVL-GNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQRR 555 V+ G L + LD V+PQ VVAI Q+ A L+ ++ RPVL+LV+++DPGN GTL+R AEA+GCAGVVL VD NPK VRS+AG+ R P+VE +AV+ + +A + A + G + A+LG A +VL G+EAHGL +V A V IP +G ESLN VAGAL+ FE RQRR Sbjct: 89 VDEGALARVLDVVTPQSVVAIASQAPAVLDDVLRIAVETGRPVLVLVELQDPGNAGTLVRVAEAAGCAGVVLTPRSVDLHNPKTVRSTAGALFRVPVVEGVEAVDVIGAAAAAGLASWAT-VRDGGTALDAAELGGACLVLVGSEAHGLPDDVAAAASGRVSIPMEGEIESLNAAVAGALVVFEAARQRR 277
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: A0A359F227_9ACTN (rRNA methyltransferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F227_9ACTN) HSP 1 Score: 149 bits (375), Expect = 1.360e-41 Identity = 89/191 (46.60%), Postives = 118/191 (61.78%), Query Frame = 1 Query: 1 LVEPGVLDKALDTVSPQPVVAIVEQSSASLESLPLD-----RPVLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIV-ELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADLGR-AVIVLGNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQR 552 LV GVL+ L TV+PQP+ AI EQ S + + L RPVL+L ++ DPGN+GT++R AEASGCAGV+L VD NPK+VR++AGS R P+ E+P +E +A + ++ L A + G L A +V+GNEAHGL P V+ CD+ V I GPTESLNV +A +L FE RQR Sbjct: 40 LVSSGVLESVLSTVTPQPMCAIAEQHLVSCDEVLLGAIDSARPVLVLCELADPGNVGTILRAAEASGCAGVILTPRSVDLYNPKLVRAAAGSLFRVPVAAEVP--LELVAQTAQENGLKLLATVAHGGPSHTETHLADVACLVMGNEAHGLDPLVIAQCDSTVSITMQGPTESLNVAMAATVLCFEAQRQR 228
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Match: A0A257RIP1_9ACTN (SpoU_methylase domain-containing protein n=1 Tax=Actinobacteria bacterium 21-73-9 TaxID=1970489 RepID=A0A257RIP1_9ACTN) HSP 1 Score: 145 bits (367), Expect = 9.290e-41 Identity = 89/187 (47.59%), Postives = 122/187 (65.24%), Query Frame = 1 Query: 10 PGVLDKALDTVSPQPVVAIVEQSSASLESLPLDRP--VLMLVDVRDPGNMGTLIRTAEASGCAGVVLAGSCVDPSNPKVVRSSAGSWLRTPIV--ELPDAVETLAVLSAQSRPTLAAALVSGAVEMWHADL-GRAVIVLGNEAHGLSPEVVEACDAAVIIPFDGPTESLNVGVAGALLAFEGLRQRR 555 PGVL++ D V+PQ ++A A+LE++ RP VL+L D+RDPGN+GTLIRTA+A+G A VVL G VDP+NPK +R+SAGS P+V EL DA+ L A+ + A++V G + +DL G +++GNEA GL+ VV CDA++ IP G ESLN AGA+LA+E + QRR Sbjct: 16 PGVLERVADAVTPQGILAAARLPVATLEAV---RPGTVLVLCDLRDPGNVGTLIRTADATGAAAVVLTGPGVDPTNPKALRASAGSIFHVPVVVAELDDALADLRAKGAR----ILASVVRGGGDPCASDLAGPCALLIGNEAAGLAEAVVARCDASLTIPMAGRAESLNAATAGAMLAYEAMVQRR 195 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102784.591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102784.591.1 >prot_M-pyrifera_M_contig102784.591.1 ID=prot_M-pyrifera_M_contig102784.591.1|Name=mRNA_M-pyrifera_M_contig102784.591.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp LVEPGVLDKALDTVSPQPVVAIVEQSSASLESLPLDRPVLMLVDVRDPGNback to top mRNA from alignment at M-pyrifera_M_contig102784:3..566+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102784.591.1 ID=mRNA_M-pyrifera_M_contig102784.591.1|Name=mRNA_M-pyrifera_M_contig102784.591.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig102784:3..566+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102784:3..566+ >mRNA_M-pyrifera_M_contig102784.591.1 ID=mRNA_M-pyrifera_M_contig102784.591.1|Name=mRNA_M-pyrifera_M_contig102784.591.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig102784:3..566+ (Macrocystis pyrifera P11B4 male)back to top |