mRNA_M-pyrifera_M_contig13233.5887.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13233.5887.1
Unique NamemRNA_M-pyrifera_M_contig13233.5887.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: D8LEH1_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEH1_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 5.110e-78
Identity = 193/383 (50.39%), Postives = 214/383 (55.87%), Query Frame = 1 
Query:    1 IESFHYANKVQELKGSQKATDEKKDRNKGKYASASQGLRDQTNQLMATFAKAEQVRERLLKEDLPSVIIAKRNAFDSFAINLNRAAAEATAGEPRPPRMSDAARAPHRLLPMTPNKDGAPWSGSGGAGEFGDELKRAHEHQNSKMAAESAAAVAAGLP-----------------STPKGAPTDSVTS---ASGDARSPTPRSESSPQTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGELEPGKHRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHGNNGNFPANYTEPW 1089
            +E  HY+NKVQELKGSQKATDEKKDRNK KYA ASQ LRDQTNQLM+ FA AEQ+R+RLL +D PSVI A++NAFD+FAINLN+AAAE + GEPRPPRMSDAARAP R  PM+P   GAPWSGS   GEFG+ELKRAHEHQNSKMAAESA                          TP  A T+S TS   A+ DA    P   ++   P                                                                         XXXXXXXXXXXXXXXXX                     LEPGK R+RALYDY+AT+ GDLSF  GDMII+D GAFSG GW SG CHGN G FPANYTEPW
Sbjct:  162 MEMLHYSNKVQELKGSQKATDEKKDRNKEKYAQASQALRDQTNQLMSIFAHAEQLRQRLLTQDFPSVITAEKNAFDAFAINLNKAAAETSDGEPRPPRMSDAARAPQRT-PMSPKDGGAPWSGSNDGGEFGEELKRAHEHQNSKMAAESAXXXXXXXXXXXXXXXXXXXXXXXXADTP--AMTNSSTSGADAADDAEKHDPSEAAALAAPAPAGEKDATAPTESPKPPAAAATVDDEAAVAGSGPKTDSPDDEAEALTAAVPAMATAPEASAPGEEQAEEVPGXXXXXXXXXXXXXXXXX---------------------LEPGKVRVRALYDYEATQEGDLSFGVGDMIITDGGAFSGDGWVSGTCHGNTGIFPANYTEPW 520
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: A0A836CJ66_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ66_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.550e-13
Identity = 88/362 (24.31%), Postives = 138/362 (38.12%), Query Frame = 1 
Query:    1 IESFHYANKVQELKGSQKATDEKKDRNKGKYASASQGLRDQTNQLMATFAKAEQVRERLLKEDLPSVIIAKRNAFDSFAINLNRAAAEATAGEPRPPRMSDAARAPHRLLPMTPNKDGAPWSGSG-GAGEFGDELKRAHEHQNSKMAAESAAAVAAGLPSTPKGAPTDSVTSASGDARSPTPRSESSPQTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGELEPGKHRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHGNNGNFPANYTE 1083
            +E  HY++KVQEL  + K   E+K RN+ KYA+A+  LR+QT+ L+  FA++E  R R+L+EDLP ++  KR A+ + A N  +AA                     + L + P + G+  S S  G+ +     + ++++  +   AESA      +   P G  +   TS + D  + +    + P                                                                                                                G L PG  R+RALYD++A E GDL+F+A D+I++D   +S  GW +G C+G  G FP+NYTE
Sbjct:  435 VELQHYSDKVQELNDNPKVAAERKVRNEEKYATANTRLREQTDALLRRFAESEVRRRRVLEEDLPRIMDLKRLAYAALATNAEKAA---------------------QGLVLAPMRSGSRGSSSAFGSKDLPGSARGSYDNTVTGQGAESAR-----MSDVPLGGTSSQRTSVNTDHGASSHALTAKPAAAALLDSPPSHLYKRASGSMESVQPGGNAGGVVGQSSHSGSAAAAASEDVVSTRTALEQNMGATAVPVSQEVFHEASYEQEQEPVTAAATPEANAADANASRTEPEVVD--GGLGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTE 768
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: A0A835Z502_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z502_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 8.710e-12
Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 1 
Query:  901 ELEPGKHRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHGNNGNFPANYTE 1083
            EL PG  R+RAL+D++A + GDL+F+AGD+II++   +   GW +G C+G  G FP+NYTE
Sbjct:   80 ELPPGFIRVRALFDFEAAQPGDLNFKAGDIIITESAQWGMDGWVNGICNGQTGQFPSNYTE 140
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: A0A4Q4VEF5_9PEZI (Uncharacterized protein n=1 Tax=Monosporascus sp. MC13-8B TaxID=2211646 RepID=A0A4Q4VEF5_9PEZI)

HSP 1 Score: 62.8 bits (151), Expect = 5.570e-7
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 1 
Query:  898 GELEPGKHRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHGNNGNFPANYTE 1083
            G  +P    + ALYDY A  AGDLSFRAGD+I       + + W +G+CHG  G+FP NY E
Sbjct:  400 GSAKPAVETVTALYDYQAQAAGDLSFRAGDVIEIVSRTQNENEWWTGKCHGQTGSFPGNYVE 461
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: A0A4Q4UF59_9PEZI (Uncharacterized protein n=3 Tax=unclassified Monosporascus TaxID=2618023 RepID=A0A4Q4UF59_9PEZI)

HSP 1 Score: 61.6 bits (148), Expect = 8.910e-7
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 1 
Query:  898 GELEPGKHRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHGNNGNFPANYTE 1083
            G  +P    + ALYDY A  AGDLSFRAGD+I       + + W +G+CHG  G+FP NY +
Sbjct:  400 GSAKPAAETVTALYDYQAQAAGDLSFRAGDVIEIISRTQNENEWWTGKCHGQTGSFPGNYVK 461
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: A0A0L0D5W0_THETB (Myosin ID heavy chain n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D5W0_THETB)

HSP 1 Score: 61.6 bits (148), Expect = 1.270e-6
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 1 
Query:  898 GELEPGKHRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHGNNGNFPANYTE 1083
            G   P +  + ALYDYDA EAG+LSFR GD+I        G GW +GE  G+ G FP+NY +
Sbjct:  908 GARTPARETVTALYDYDAQEAGELSFREGDVITI---VSKGDGWWTGELRGSKGEFPSNYVQ 966
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: F0YR37_AURAN (SH3 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YR37_AURAN)

HSP 1 Score: 58.5 bits (140), Expect = 4.120e-6
Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 1 
Query:  910 PGKHRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSG----WASGECHGNNGNFPANY 1077
            PG  ++ A +D+   +AGDL F+ GD+I++DE AF+ +G    W +GE +G +G+FP+NY
Sbjct:  210 PGMIQVTAQFDFAEVQAGDLGFKVGDLILTDEAAFNAAGASGGWITGELNGKSGSFPSNY 269
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: F0Y2T1_AURAN (SH3 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2T1_AURAN)

HSP 1 Score: 59.3 bits (142), Expect = 7.080e-6
Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 1 
Query:  904 LEPGK--HRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSG----WASGECHGNNGNFPANYTEP 1086
            L+PG     + A +D+   +AGDL F+ GD+I++DE AF+ +G    W +GE +G +G+FP+NY  P
Sbjct:  969 LDPGAAAQAVTAQFDFAEVQAGDLGFKVGDLILTDEAAFNAAGASGGWITGELNGKSGSFPSNYVAP 1035
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: A0A367KBA6_RHIST (SH3 domain-containing protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KBA6_RHIST)

HSP 1 Score: 58.2 bits (139), Expect = 8.740e-6
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 1 
Query:  922 RLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHGNNGNFPANYTE 1083
            R RALYD+   EAGDLSF+AGD+I   E   S   W SG  +G +G FPANY E
Sbjct:  293 RARALYDFVGQEAGDLSFKAGDIIQVTESTQSQHDWWSGNLNGKSGAFPANYVE 346
[Close]
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Match: M7SHD8_EUTLA (Putative bar domain-containing protein n=1 Tax=Eutypa lata (strain UCR-EL1) TaxID=1287681 RepID=M7SHD8_EUTLA)

HSP 1 Score: 57.4 bits (137), Expect = 2.110e-5
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:  925 LRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHGNNGNFPANYTE 1083
            + ALYDY A  AGDLSFRAGD+I       + + W SG+CHG  G+FP NY +
Sbjct:  421 VTALYDYQAQAAGDLSFRAGDVIEIITRTPNENEWWSGKCHGQTGSFPGNYVK 473
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13233.5887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LEH1_ECTSI5.110e-7850.39SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CJ66_9STRA1.550e-1324.31SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z502_9STRA8.710e-1250.82SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4Q4VEF5_9PEZI5.570e-748.39Uncharacterized protein n=1 Tax=Monosporascus sp. ... [more]
A0A4Q4UF59_9PEZI8.910e-746.77Uncharacterized protein n=3 Tax=unclassified Monos... [more]
A0A0L0D5W0_THETB1.270e-648.39Myosin ID heavy chain n=1 Tax=Thecamonas trahens A... [more]
F0YR37_AURAN4.120e-643.33SH3 domain-containing protein (Fragment) n=1 Tax=A... [more]
F0Y2T1_AURAN7.080e-641.79SH3 domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A367KBA6_RHIST8.740e-655.56SH3 domain-containing protein (Fragment) n=1 Tax=R... [more]
M7SHD8_EUTLA2.110e-552.83Putative bar domain-containing protein n=1 Tax=Eut... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13233contigM-pyrifera_M_contig13233:6032..8792 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.8
Seed ortholog evalue3e-68
Seed eggNOG ortholog2880.D8LEH1
KEGG koko:K11247,ko:K11650,ko:K20047
KEGG Pathwayko04144,ko04714,ko05225,map04144,map04714,map05225
Hectar predicted targeting categoryother localisation
EggNOG free text desc.intracellular protein transport
EggNOG OGsKOG2199@1,KOG2199@2759
Ec32 ortholog descriptionSH3 domain
Ec32 orthologEc-21_004710.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03036,ko04131
Exons2
Model size1092
Cds size1092
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815811.4301963-CDS-M-pyrifera_M_contig13233:6031..67971622815811.4301963-CDS-M-pyrifera_M_contig13233:6031..6797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13233 6032..6797 -
1692277582.150191-CDS-M-pyrifera_M_contig13233:6031..67971692277582.150191-CDS-M-pyrifera_M_contig13233:6031..6797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13233 6032..6797 -
1622815811.5413594-CDS-M-pyrifera_M_contig13233:8466..87921622815811.5413594-CDS-M-pyrifera_M_contig13233:8466..8792Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13233 8467..8792 -
1692277582.1629784-CDS-M-pyrifera_M_contig13233:8466..87921692277582.1629784-CDS-M-pyrifera_M_contig13233:8466..8792Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13233 8467..8792 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13233.5887.1prot_M-pyrifera_M_contig13233.5887.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13233 6032..8792 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13233.5887.1

>prot_M-pyrifera_M_contig13233.5887.1 ID=prot_M-pyrifera_M_contig13233.5887.1|Name=mRNA_M-pyrifera_M_contig13233.5887.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=364bp
IESFHYANKVQELKGSQKATDEKKDRNKGKYASASQGLRDQTNQLMATFA
KAEQVRERLLKEDLPSVIIAKRNAFDSFAINLNRAAAEATAGEPRPPRMS
DAARAPHRLLPMTPNKDGAPWSGSGGAGEFGDELKRAHEHQNSKMAAESA
AAVAAGLPSTPKGAPTDSVTSASGDARSPTPRSESSPQTPPSSSGGGTSG
FSDRTAAADTAGVAAAAATAEEERPETTSTPDEKQQPPPEEEHSPARDEG
GTMSPAPSTPPEDSTQKSVTVVEEPEKPEEPEGDCAAAGGGGEAEEEERG
ELEPGKHRLRALYDYDATEAGDLSFRAGDMIISDEGAFSGSGWASGECHG
NNGNFPANYTEPW*
back to top

mRNA from alignment at M-pyrifera_M_contig13233:6032..8792-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13233.5887.1 ID=mRNA_M-pyrifera_M_contig13233.5887.1|Name=mRNA_M-pyrifera_M_contig13233.5887.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2761bp|location=Sequence derived from alignment at M-pyrifera_M_contig13233:6032..8792- (Macrocystis pyrifera P11B4 male)
ATCGAGTCTTTCCACTATGCCAACAAGGTGCAGGAGCTCAAGGGCAGCCA
GAAAGCGACGGATGAGAAGAAGGACCGAAACAAGGGGAAGTACGCTTCGG
CGTCCCAGGGGCTTCGCGACCAAACAAACCAGCTCATGGCCACCTTCGCC
AAGGCGGAGCAGGTGCGAGAGAGGCTCCTGAAGGAGGACCTTCCCTCCGT
GATCATCGCGAAGAGGAACGCCTTCGACTCCTTCGCCATCAATCTCAACA
GGGCGGCGGCGGAGGCTACCGCCGGGGAGCCGCGCCCACCCAGGATGTCC
GATGCTGCGCGGGCTCCTCACAGGTTGTTGTTTGTTGTTGTGTTCTGCTT
ATTCCCGTTGGGGTTGTACTTGCTTGTGTGCTTGTTGCAATAGTACATTT
TTTTTTCGTTTCGTTTTGTTTCGTTTCGTTGAGCTCGATTTTTAGTACGT
GCCTCTTTATTGTGTATTTTTAGTTTATTTACTGTATTTGTTTTGTTTAG
TTTGTTCATGCACATGGTCATTAACTTACCCAGCAGGTATTACGGGGATC
CATAGTTAACAGGACCAGATTTTGTTAGTAAAAATAGGTAAATATATAGG
TTTTTATGTATACCATAGGTCCTGTTAACTATGTACCCCCGTAATAGTTG
TTTATTTTATTAAGGCATGTGAGAATTTACTTACCGTAGTCGCGTTTTTT
TTGTTAGTTATGTCAAGATCGACCACACGACCCAACGCGGGCTGCTATAT
ACACACCTGGTAGGTTGTGGGGAATAATGTTTTTTCACTTCGAACTCTCG
ATGTAATGAGTTGTTCGACATGCTCGCAGTGTGCACCATTGTCCGCTGCA
CGCTCGCACTATGAGGAGGCCGAACTTCTCGTTCCCTGCTCCTTGATCGC
TCTGTCCGCTTGTCAACAATCGCTATGCATGGACTGCACCCACTTTTTTT
GGAAACACACTACGTGCATGGAATTAACGTTTGATCGCTTTTGCAATGTA
CTGTAAAGGTTAATCTAACAAGATACCAGGTATCTCTGTTTGAGAAAAAT
TGAAAGTACGAGCTGTGCATCGTTGATCGCTCATCACGATGCCCTCCAAG
GCGCGAAAATGTGACGAAGTTGCCGCCCCATCGCCTCTGCCTGCATATCT
CTCTCGTGATTGATTTCATGGGGTTCTCGGCAGGGTGATGCCCACCAGCG
ACTTCCCTACGCCACCACCGAACAATGGTTTGACGGTGGTTTCGCTGGAT
GACGACTCGCCGGGGTCAGAACCTCCACCGTACTCGTCGCCGGTTAGGGT
CCAACCCCCGGCGTCGGCGGATGTTACGCAGACGATTGTCAAGAAACGGA
GTCCGTGAGTGCCACATCGGCGTAGATTATTGATATGAGCTACTGTCGTG
AGAAGTACTGGGAGAACTACTGGAAGGGTTGCTGTAAGAGCTGGTATACT
GTACAACGTATTGGAAGACCTGGAAGAGCTATTGCAAGAGCTACTGCTGC
AGGAGCTGGTATGCTGTAGAACCTACTGGAAGACCTGTAAGACCTGTTGC
AAGAGCTACTGGAGCTACTGCGAGATTTGTTTGTTGCGCTGTTTTCGAGA
GGGCTGGTGCTGAAGACAGAGCGTTTGTTTTGCCGTCGGTGGCACTGCTT
CACCGTTGTAGCGGCCTTGGCGATCATTTTTTTCTTTTTTCTCCGACATT
CCGACGTACGTAATGTCAGCCTGCCTCTGCTCTTTCTCCTCCTGGAGACA
CACTACCGAACTACAGCAGTAGCTTGTCGAGGAACAGCTCACAAGCCGAA
CAACAAAGTTTCGCTGCCGACTTGAATCGATGCCCAACGGAGGCAGCGCG
GCTCTTAGGTTTCATGGCACCATGCCCTTTCTCGGTCAGGGTTGATATCC
CATGCACTTGCTGCCCCGCCCTTGCCCCTGCTTTCATCCCCACCCCTGCC
TACACCATCCCACCCCTATCCCTCAATGAATGTACACGGCCAAAGGTTGC
CGATGACACCGAATAAAGATGGAGCTCCCTGGTCGGGCAGCGGCGGAGCG
GGCGAGTTCGGGGACGAGCTTAAGCGTGCCCACGAGCACCAGAACAGCAA
GATGGCCGCCGAGTCCGCTGCCGCCGTGGCCGCGGGGCTCCCGTCGACTC
CGAAGGGGGCGCCGACTGATTCGGTCACCTCCGCTTCGGGAGACGCTCGA
TCGCCAACGCCGCGCTCCGAGTCGTCACCGCAGACTCCTCCTAGTAGTAG
TGGCGGTGGCACGAGTGGATTTAGCGATCGTACGGCTGCGGCAGATACAG
CGGGAGTGGCAGCAGCAGCAGCGACGGCGGAGGAGGAGAGACCGGAGACC
ACCTCGACGCCCGACGAGAAGCAGCAGCCGCCACCGGAAGAGGAGCACTC
GCCCGCGCGCGACGAAGGCGGAACGATGTCGCCGGCGCCGTCGACGCCGC
CCGAAGACTCGACCCAGAAGAGTGTAACCGTCGTGGAGGAACCGGAAAAA
CCAGAGGAACCGGAGGGAGACTGCGCGGCTGCGGGGGGTGGGGGTGAGGC
GGAGGAAGAAGAAAGGGGGGAGCTCGAGCCCGGAAAGCACCGACTGCGCG
CACTGTACGACTACGACGCTACGGAGGCCGGCGACCTGAGCTTCCGCGCC
GGAGACATGATCATATCGGACGAGGGGGCGTTTTCGGGAAGCGGTTGGGC
TTCCGGAGAATGCCACGGAAACAACGGAAATTTCCCCGCCAACTACACCG
AGCCTTGGTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig13233:6032..8792-

>mRNA_M-pyrifera_M_contig13233.5887.1 ID=mRNA_M-pyrifera_M_contig13233.5887.1|Name=mRNA_M-pyrifera_M_contig13233.5887.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2184bp|location=Sequence derived from alignment at M-pyrifera_M_contig13233:6032..8792- (Macrocystis pyrifera P11B4 male)
ATCGAGTCTTTCCACTATGCCAACAAGGTGCAGGAGCTCAAGGGCAGCCA
GAAAGCGACGGATGAGAAGAAGGACCGAAACAAGGGGAAGTACGCTTCGG
CGTCCCAGGGGCTTCGCGACCAAACAAACCAGCTCATGGCCACCTTCGCC
AAGGCGGAGCAGGTGCGAGAGAGGCTCCTGAAGGAGGACCTTCCCTCCGT
GATCATCGCGAAGAGGAACGCCTTCGACTCCTTCGCCATCAATCTCAACA
GGGCGGCGGCGGAGGCTACCGCCGGGGAGCCGCGCCCACCCAGGATGTCC
GATGCTGCGCGGGCTCCTCACAGGTTATCGAGTCTTTCCACTATGCCAAC
AAGGTGCAGGAGCTCAAGGGCAGCCAGAAAGCGACGGATGAGAAGAAGGA
CCGAAACAAGGGGAAGTACGCTTCGGCGTCCCAGGGGCTTCGCGACCAAA
CAAACCAGCTCATGGCCACCTTCGCCAAGGCGGAGCAGGTGCGAGAGAGG
CTCCTGAAGGAGGACCTTCCCTCCGTGATCATCGCGAAGAGGAACGCCTT
CGACTCCTTCGCCATCAATCTCAACAGGGCGGCGGCGGAGGCTACCGCCG
GGGAGCCGCGCCCACCCAGGATGTCCGATGCTGCGCGGGCTCCTCACAGG
TTGTTGCCGATGACACCGAATAAAGATGGAGCTCCCTGGTCGGGCAGCGG
CGGAGCGGGCGAGTTCGGGGACGAGCTTAAGCGTGCCCACGAGCACCAGA
ACAGCAAGATGGCCGCCGAGTCCGCTGCCGCCGTGGCCGCGGGGCTCCCG
TCGACTCCGAAGGGGGCGCCGACTGATTCGGTCACCTCCGCTTCGGGAGA
CGCTCGATCGCCAACGCCGCGCTCCGAGTCGTCACCGCAGACTCCTCCTA
GTAGTAGTGGCGGTGGCACGAGTGGATTTAGCGATCGTACGGCTGCGGCA
GATACAGCGGGAGTGGCAGCAGCAGCAGCGACGGCGGAGGAGGAGAGACC
GGAGACCACCTCGACGCCCGACGAGAAGCAGCAGCCGCCACCGGAAGAGG
AGCACTCGCCCGCGCGCGACGAAGGCGGAACGATGTCGCCGGCGCCGTCG
ACGCCGCCCGAAGACTCGACCCAGAAGAGTGTAACCGTCGTGGAGGAACC
GGAAAAACCAGAGGAACCGGAGGGAGACTGCGCGGCTGCGGGGGGTGGGG
GTGAGGCGGAGGAAGAAGAAAGGGGGGAGCTCGAGCCCGGAAAGCACCGA
CTGCGCGCACTGTACGACTACGACGCTACGGAGGCCGGCGACCTGAGCTT
CCGCGCCGGAGACATGATCATATCGGACGAGGGGGCGTTTTCGGGAAGCG
GTTGGGCTTCCGGAGAATGCCACGGAAACAACGGAAATTTCCCCGCCAAC
TACACCGAGCCTTGGTGAGTTGCCGATGACACCGAATAAAGATGGAGCTC
CCTGGTCGGGCAGCGGCGGAGCGGGCGAGTTCGGGGACGAGCTTAAGCGT
GCCCACGAGCACCAGAACAGCAAGATGGCCGCCGAGTCCGCTGCCGCCGT
GGCCGCGGGGCTCCCGTCGACTCCGAAGGGGGCGCCGACTGATTCGGTCA
CCTCCGCTTCGGGAGACGCTCGATCGCCAACGCCGCGCTCCGAGTCGTCA
CCGCAGACTCCTCCTAGTAGTAGTGGCGGTGGCACGAGTGGATTTAGCGA
TCGTACGGCTGCGGCAGATACAGCGGGAGTGGCAGCAGCAGCAGCGACGG
CGGAGGAGGAGAGACCGGAGACCACCTCGACGCCCGACGAGAAGCAGCAG
CCGCCACCGGAAGAGGAGCACTCGCCCGCGCGCGACGAAGGCGGAACGAT
GTCGCCGGCGCCGTCGACGCCGCCCGAAGACTCGACCCAGAAGAGTGTAA
CCGTCGTGGAGGAACCGGAAAAACCAGAGGAACCGGAGGGAGACTGCGCG
GCTGCGGGGGGTGGGGGTGAGGCGGAGGAAGAAGAAAGGGGGGAGCTCGA
GCCCGGAAAGCACCGACTGCGCGCACTGTACGACTACGACGCTACGGAGG
CCGGCGACCTGAGCTTCCGCGCCGGAGACATGATCATATCGGACGAGGGG
GCGTTTTCGGGAAGCGGTTGGGCTTCCGGAGAATGCCACGGAAACAACGG
AAATTTCCCCGCCAACTACACCGAGCCTTGGTGA
back to top