mRNA_M-pyrifera_M_contig1307.5838.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1307.5838.1
Unique NamemRNA_M-pyrifera_M_contig1307.5838.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: D7FV57_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV57_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 3.660e-117
Identity = 167/224 (74.55%), Postives = 188/224 (83.93%), Query Frame = 1 
Query:  334 MKALFKKQEVEVVKTEELGDIKDRVDTQLLAEVQEYEAAPSEAASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEYSMEWKSVDLTREAFSAEKFDVALDKACLDSIVCSTQ--VRTDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAK 999
            MK LFKKQ  EV + EELG++ +RVD +LL EVQEY+A PSEAASYG  TFWD RYA D EVVEWYHPW +LAPTLTQYMDEQD+VLVCGCGNSEMSVDMYDDGFENI NADIS+V I Q+ +  K Y MEWKS+DLTRE F  EKFDVALDKACLDSI C+ +  V  +NYLQQ+DR+LQPEGAFICVSFAPPE+RLE+LEYWD+D P KCLAWDVHVD I +
Sbjct:    1 MKNLFKKQSDEVAEIEELGELNERVDAKLLEEVQEYDAVPSEAASYGKTTFWDERYAGDGEVVEWYHPWGNLAPTLTQYMDEQDEVLVCGCGNSEMSVDMYDDGFENIVNADISKVAIHQVTEIYKAYPMEWKSIDLTREEFPEEKFDVALDKACLDSIACNLRGVVNAENYLQQMDRLLQPEGAFICVSFAPPEERLELLEYWDIDQPAKCLAWDVHVDTIGE 224
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: A0A7S1UEF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEF3_9STRA)

HSP 1 Score: 183 bits (465), Expect = 6.110e-52
Identity = 92/215 (42.79%), Postives = 132/215 (61.40%), Query Frame = 1 
Query:  439 YEAAPSEAASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEYSMEWKSVDLTREAFSAEKFDVALDKACLDSIVCST--QVRTDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQ-RGRTKRAESDGDFYIYVCIKD 1074
            Y++ P++A +YG   FWD RYA      EWYHP+ +LA  + Q+++  D +L+ GCGNS +  DMY+DG+E I   D+SRVVIDQ Q+   +  ++W  +++    F  E+FD  +DKACLD+I C    +      LQ++DRIL+PEG +  VS   PE+RLE+LE  D+   +  LAW V V AIAKP +  +     A+    +YIYVC KD
Sbjct:   39 YQSVPTDACNYGKANFWDDRYARSENAFEWYHPYPALAVLIGQFVNYDDTILIMGCGNSTLPEDMYNDGYERIVCVDLSRVVIDQQQEKYADLPIQWVQMNMCDSLFENEQFDAVIDKACLDAIYCHELGEASAKAALQEVDRILKPEGVYFMVSRGLPEERLEVLEVEDVKE-KGYLAWQVQVHAIAKPAVDVKYIPNLADPTSVYYIYVCEKD 252
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: A0A6V1PD48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PD48_HETAK)

HSP 1 Score: 182 bits (462), Expect = 6.470e-52
Identity = 95/221 (42.99%), Postives = 136/221 (61.54%), Query Frame = 1 
Query:  436 EYEAAPSEAASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEY--SMEWKSVDLTREAFSAEKFDVALDKACLDSIVCSTQVR--TDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQRGRTKRAESDGD-FYIYVCIKDPGK 1083
            EYE+ P++AA Y    FWD RY  + EV EWYHP+ +       +MD+ D++L  GCGNSEMS +M  +G++ + N D S+VVI+QM++   +    M W  +D  +  F    FD+ LDK C+DS++C  + R  T   LQ+IDR+L+P+GA+I +S+  P+ RL++LE  D+D P   L WDV V+AIAKP      T      G  +YIYVCIK+  K
Sbjct:   13 EYESHPTDAAQYAKAAFWDSRYMRNPEVFEWYHPYDAFVDIFEMFMDKGDEILNIGCGNSEMSAEMALEGYDWVTNIDHSKVVIEQMKEKYADDLPDMPWYYMDAAKLRFPDNTFDIVLDKGCMDSMLCGNKGRYETGKMLQEIDRVLKPDGAYILISYGTPDLRLDLLEDADIDSPG-FLTWDVFVNAIAKPTTDNFTTPDYGDLGSMYYIYVCIKEERK 232
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: F0YBR1_AURAN (Methyltransf_11 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBR1_AURAN)

HSP 1 Score: 166 bits (420), Expect = 7.570e-46
Identity = 91/219 (41.55%), Postives = 133/219 (60.73%), Query Frame = 1 
Query:  469 YGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQM------QDTCKEY------SMEWKSVDLT--REAFSAEKFDVALDKACLDSIVCSTQV--RTDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQRGRTKRAESDGD-FYIYVCIKD 1074
            +G   FWD RY  + E  EWYH +A+L P L Q+M ++  +L+ GCG+SEM+ DMY+DG+ ++FN DISRVV+D+M      ++  K Y       ++WK  D T     F+ + FDV +DKA LD++ CS     +T  YLQ++DRIL PEG F CVSF  PE+RL+ +E  D +  +  LAW+V V AI K    + +  + +   D +Y+Y C K+
Sbjct:    2 FGSPGFWDERYYVNCEPFEWYHDYAALKPLLEQFMTKEMHILLVGCGSSEMARDMYEDGYTSLFNVDISRVVVDEMAMRYDMKEIPKMYFEDDLGGIQWKQADATDLTAMFNDKIFDVVVDKALLDALYCSEVPGKQTHKYLQEMDRILTPEGLFFCVSFGLPENRLDKIEDTD-EESDGFLAWEVEVHAIPKLMPNQYKVSQLKKPEDVYYVYTCRKE 219
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: A0A7S2V469_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V469_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.640e-42
Identity = 80/195 (41.03%), Postives = 116/195 (59.49%), Query Frame = 1 
Query:  514 EVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEY--SMEWKSVDLTREAFSAEKFDVALDKACLDSIVCSTQ--VRTDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQR-GRTKRAESDGDFYIYVCIKDPGK 1083
            +V EWY+P+ + A     YMD  D +LV GCGNSEMS +M ++G+ +I N D S+VVIDQMQ+  KE    M W  +D  +  F    FDV +DK  LDS++C+ +  +     LQ +D++L+P+G +I VS+  P+ RL++LE  D+   E  L WD  V AIAKP          ++    +Y+YVCIK+  K
Sbjct:    1 DVFEWYYPYDAFADIFAMYMDVNDDILVLGCGNSEMSAEMQEEGYNHIINVDFSKVVIDQMQEKYKEDYPDMTWYVMDAMKLKFEKHTFDVVIDKGLLDSMLCTDKGIINAKMMLQNVDKVLKPDGVYIVVSYGTPDARLDLLEN-DVYESEDFLTWDAFVHAIAKPAANPFSFPDYSDYQSMYYVYVCIKEEKK 194
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: A0A7S2DUE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUE8_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.980e-37
Identity = 75/219 (34.25%), Postives = 121/219 (55.25%), Query Frame = 1 
Query:  439 YEAAPSEAASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEY---SMEWKSVDLT--REAFSAEKFDVALDKACLDSIVCSTQ--VRTDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQRGRTKRAES-DGDFYIYVCIK 1071
            Y+  P +A  YG   FWD RY  + E  +WYHP+++L   + +Y++   +VL+ GCGNS +  DM DDGF  I N DISR+V+DQM++   +     +E++ +D+   +  F  ++F   +DKA +D+I C      +    L + DR+L   G +ICVS   PE+RL+  +   ++     + W VHV  I KP +   +       D  +++YVC+K
Sbjct:   50 YDPVPEDACQYGKPFFWDERYMSNEEAFDWYHPYSNLRGIIKKYVEPDFKVLIAGCGNSRLCEDMVDDGFSQIVNVDISRIVVDQMEEKYTDTLGDGVEFRQMDVCDMQGEFEDKEFQAVIDKALIDTIYCMEHGSKKVKQVLHEFDRLLTHTGVYICVSCGKPENRLKEFDN-SIEQDAGFMPWKVHVFTIPKPIVNPYKPIDIHDLDEMYFVYVCVK 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: A0A067CRN2_SAPPC (Methyltransf_11 domain-containing protein n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRN2_SAPPC)

HSP 1 Score: 142 bits (358), Expect = 3.470e-37
Identity = 77/210 (36.67%), Postives = 116/210 (55.24%), Query Frame = 1 
Query:  463 ASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEYS----MEWKSVDLTREAFSAEKFDVALDKACLDSIVCS--TQVRTDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQRGR-TKRAESDGDFYIYVCIK 1071
            A YG  ++WD RY  D E  +WY  +A L   + QY+ + D VL+ G GNS ++ +M +DGF+ I N D+S+VV+DQM    K+Y     M+W+ +++   +FS E FD   DK  +DSI+C   +        Q++ R+L+P G F  VS+  P++RL  LE          L W V V  + KP +   + T  A+++   YIYVC K
Sbjct:    2 AQYGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQM---AKKYEGHEGMQWQQMNVCSLSFSDETFDSVFDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLE-------NNELHWKVTVHTVPKPTVSAVQVTDAADANAVHYIYVCQK 201
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: A0A024GH48_9STRA (Methyltransf_11 domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GH48_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.470e-37
Identity = 73/207 (35.27%), Postives = 112/207 (54.11%), Query Frame = 1 
Query:  463 ASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEY--SMEWKSVDLTREAFSAEKFDVALDKACLDSIVCS--TQVRTDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQRGRTKRAESDGDFYIYVCIK 1071
            A YG  ++WD RY  D E  +WY  +  L   LTQY+ + D +L+ G GNS +S +M +DG++ I N DIS VV +QM    ++   S++W  +D+    FS E +D  +DK  +DSI+C   +        Q+I R+L+P+G +  +S+  P++RL  LE        K   W V V  + KP +       A+++   YIYVC K
Sbjct:    2 AQYGKASYWDERYEKDAEQFDWYQRYGGLKDLLTQYVKKTDAILMAGAGNSRLSEEMVNDGYQKIVNIDISSVVTEQMSKKYEDRAESLQWLKMDICSLEFSDESYDAVVDKGTMDSILCGEGSTANISKMCQEIHRVLKPDGVYFVISYGIPDNRLTYLE-------NKENGWKVTVHTVPKPTISAVPVTEADANSVHYIYVCQK 201
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: A0A7S2V7W5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7W5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 9.880e-37
Identity = 75/209 (35.89%), Postives = 115/209 (55.02%), Query Frame = 1 
Query:  463 ASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEYS-MEWKSVDLTREAFSAEKFDVALDKACLDSIVCS--TQVRTDNYLQQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQRGR---TKRAESDGDFYIYVCIK 1071
            A YG  ++WD RY  D E  +WY  ++ +   + QY+ ++D +L+ G GNS +S +M+DDG+  I N DISRVVI+QM + C++ + + W+ +++    F  E FD  +DK  +DSI+C   +         ++ R+L+P G F  VS+  PE+RL+ LE  D        +W V    I KP +       TK A S    Y+YVC K
Sbjct:    2 AQYGKTSYWDERYTKDPEPFDWYQRYSGVKDLIAQYIHKEDNILMAGAGNSRLSEEMFDDGYTTITNIDISRVVIEQMIERCRDKAALTWQQMNVASLEFPDESFDAVIDKGTMDSILCGEGSTANCAKMCLEVSRVLKPNGVFFIVSYGVPENRLQYLENDD-------YSWQVSEHTIPKPTVTAAAVPDTKDANSV--HYVYVCQK 201
[Close]
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Match: A0A5D6XKB6_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKB6_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.000e-35
Identity = 73/208 (35.10%), Postives = 116/208 (55.77%), Query Frame = 1 
Query:  463 ASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVCGCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEY--SMEWKSVDLTREAFSAEKFDVALDKACLDSIVCSTQVRTDNYL---QQIDRILQPEGAFICVSFAPPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQRGRTKRAESDGDFYIYVCIK 1071
            A YG  ++WD RY  D E  +WY  +  L   LTQY+ + D VL+ G GNS +S +M +DG++ I N DIS +V+ QM+   ++   +++W+ ++     F+ E +D  +DK  +DSI+C  +  T N     Q++ R+L+P G +  VS+  P++RL  LE        K L W V V  + KP +   +   A+++   YIYVC K
Sbjct:    2 AQYGKASYWDERYTKDSEQFDWYQRYGGLKELLTQYVKKADAVLMVGAGNSRLSEEMANDGYQKIMNIDISEIVVAQMKAKYEDRVEALQWQRMNACSLEFADESYDSVVDKGTMDSILCG-EGSTGNVAKMCQEVHRVLKPNGVYFIVSYGVPDNRLSYLE-------TKELQWKVTVHTVPKPTVSAVQVSEADANAVHYIYVCQK 201
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1307.5838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV57_ECTSI3.660e-11774.55Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7S1UEF3_9STRA6.110e-5242.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6V1PD48_HETAK6.470e-5242.99Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YBR1_AURAN7.570e-4641.55Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7S2V469_9STRA2.640e-4241.03Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2DUE8_9STRA2.980e-3734.25Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A067CRN2_SAPPC3.470e-3736.67Methyltransf_11 domain-containing protein n=10 Tax... [more]
A0A024GH48_9STRA3.470e-3735.27Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A7S2V7W5_9STRA9.880e-3735.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A5D6XKB6_9STRA1.000e-3535.10Methyltransf_11 domain-containing protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1307contigM-pyrifera_M_contig1307:13180..19387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.6
Seed ortholog evalue1.1e-94
Seed eggNOG ortholog2880.D7FV57
Hectar predicted targeting categoryother localisation
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG2352@1,KOG2352@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1083
Cds size1083
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815806.910007-CDS-M-pyrifera_M_contig1307:13179..135831622815806.910007-CDS-M-pyrifera_M_contig1307:13179..13583Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 13180..13583 +
1692277579.445975-CDS-M-pyrifera_M_contig1307:13179..135831692277579.445975-CDS-M-pyrifera_M_contig1307:13179..13583Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 13180..13583 +
1622815806.9252174-CDS-M-pyrifera_M_contig1307:13798..139101622815806.9252174-CDS-M-pyrifera_M_contig1307:13798..13910Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 13799..13910 +
1692277579.4578733-CDS-M-pyrifera_M_contig1307:13798..139101692277579.4578733-CDS-M-pyrifera_M_contig1307:13798..13910Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 13799..13910 +
1622815806.9417717-CDS-M-pyrifera_M_contig1307:15666..157931622815806.9417717-CDS-M-pyrifera_M_contig1307:15666..15793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 15667..15793 +
1692277579.4671636-CDS-M-pyrifera_M_contig1307:15666..157931692277579.4671636-CDS-M-pyrifera_M_contig1307:15666..15793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 15667..15793 +
1622815806.9653323-CDS-M-pyrifera_M_contig1307:16511..165951622815806.9653323-CDS-M-pyrifera_M_contig1307:16511..16595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 16512..16595 +
1692277579.4762511-CDS-M-pyrifera_M_contig1307:16511..165951692277579.4762511-CDS-M-pyrifera_M_contig1307:16511..16595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 16512..16595 +
1622815806.9808753-CDS-M-pyrifera_M_contig1307:17160..172931622815806.9808753-CDS-M-pyrifera_M_contig1307:17160..17293Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 17161..17293 +
1692277579.485227-CDS-M-pyrifera_M_contig1307:17160..172931692277579.485227-CDS-M-pyrifera_M_contig1307:17160..17293Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 17161..17293 +
1622815806.993116-CDS-M-pyrifera_M_contig1307:17729..178631622815806.993116-CDS-M-pyrifera_M_contig1307:17729..17863Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 17730..17863 +
1692277579.4941666-CDS-M-pyrifera_M_contig1307:17729..178631692277579.4941666-CDS-M-pyrifera_M_contig1307:17729..17863Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 17730..17863 +
1622815807.0054438-CDS-M-pyrifera_M_contig1307:19298..193871622815807.0054438-CDS-M-pyrifera_M_contig1307:19298..19387Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 19299..19387 +
1692277579.5150414-CDS-M-pyrifera_M_contig1307:19298..193871692277579.5150414-CDS-M-pyrifera_M_contig1307:19298..19387Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1307 19299..19387 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1307.5838.1prot_M-pyrifera_M_contig1307.5838.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1307 13180..19387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1307.5838.1

>prot_M-pyrifera_M_contig1307.5838.1 ID=prot_M-pyrifera_M_contig1307.5838.1|Name=mRNA_M-pyrifera_M_contig1307.5838.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=361bp
REDGGKSDSVDSSSESNNRRSGAINSGSIGSSSSSISDSGGTGSSSSSSS
SDSGSSEREVGARKAIVGYDSGRSSGSTSASRRGGGSSSSSSNSESSGLA
EAVGGGTLKSRMKALFKKQEVEVVKTEELGDIKDRVDTQLLAEVQEYEAA
PSEAASYGVNTFWDGRYADDLEVVEWYHPWASLAPTLTQYMDEQDQVLVC
GCGNSEMSVDMYDDGFENIFNADISRVVIDQMQDTCKEYSMEWKSVDLTR
EAFSAEKFDVALDKACLDSIVCSTQVRTDNYLQQIDRILQPEGAFICVSF
APPEDRLEMLEYWDLDHPEKCLAWDVHVDAIAKPELQRGRTKRAESDGDF
YIYVCIKDPGK
back to top

mRNA from alignment at M-pyrifera_M_contig1307:13180..19387+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1307.5838.1 ID=mRNA_M-pyrifera_M_contig1307.5838.1|Name=mRNA_M-pyrifera_M_contig1307.5838.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6208bp|location=Sequence derived from alignment at M-pyrifera_M_contig1307:13180..19387+ (Macrocystis pyrifera P11B4 male)
CGAGAAGATGGCGGCAAGAGCGACAGCGTTGATAGCTCAAGCGAGAGCAA
CAACCGAAGAAGCGGCGCCATCAACAGCGGCAGCATCGGCAGCAGTAGCA
GCAGTATCTCTGATTCGGGTGGTACAGGCAGCAGCAGCAGCAGCAGCAGT
AGCGACAGCGGCTCCTCTGAGAGAGAGGTGGGTGCCCGGAAGGCTATCGT
TGGCTATGACTCGGGAAGAAGTAGTGGTTCGACCTCTGCTTCGAGGCGTG
GCGGGGGCTCAAGTAGTTCGAGTTCGAACAGCGAGAGCAGCGGTCTTGCA
GAGGCGGTGGGCGGAGGCACCCTCAAGAGCCGCATGAAGGCGCTCTTCAA
AAAGCAGGAGGTGGAGGTGGTGAAGACCGAAGAGCTGGGTGATATTAAGG
ACAGGTGAATGATGAAGAGACGCCGCGCGTGTGGGGAAGCTCGAGTTCGG
TGTTCAAAGTTGCCCGACATACAGGTAAATTGTGAAATGATCAAAGACGT
TTTGATCCAACATCGAAGCAGATCGGCGGATGGCGGTGCAATCGAACACG
GACGGTGTCGGGTTTGGATACGACCTTACCGCAATGTATGTCGGTCCCGA
AACTCTGATCTTAATGCAGGGTGGATACCCAGCTCTTGGCGGAAGTGCAA
GAGTATGAAGCAGCGCCGTCGGAAGCGGCTTCGTACGGTGTGAACACCTT
TTGGGACGGACGTTATGCCGACGACTTAGAGGTCAGCATGAAAAGCAGTA
ATCCTATTTTTTTTACCCGCCTTCCCTGCAACCCTTGTATGATATCATGC
GCCATGTTGGTACCTGTTTTATACCTGGTATGGTAAACAAGTACTAGTAC
GAGTAGTAGGTATTAAGTTTATGGTTTTAGTTATAGATCTCTTTCTCCTG
AGCGTGCTCGATCGGTACATCCCTGGCATCTCTGTGCTCCCGCTTGGATA
CCGCCTCCTACTATTACATACTGGCGAGAGCCTTTTTTTCCTTTTTTCTT
CAGTTTGTGCGCGTGCGTGTACCCAGCGCACGGCACCGCGGGCGAGCCCG
GCGCCGTCGCGGGTGTAGCGGGCGCTGGCGAGTAAAGGAGGGGTTGGAAG
GAGCGCGGTCGTTGTCGTGGCTAGGCGTCGCGTGTGCCTCGAGACACGAG
GGAAGCATGATGTCGGCTCTGTCTGGCCTCCTGGTGTGCGGTTGGATAAA
ATCTGTACGAGTCTATAAGGGCCGGTTGCAAGATTAAGTTCAAGCGGTGC
TTTTTTTGCGACCAAGCTGAAAATCAGAGAGAGAGCATCGTAGTCTGAGC
ACCAACATCGTCGAGCTGGCGAACGAGGGCCACGGTGAGCACCGGGCTTC
ACGCGAGGCGCGCGACGGGGCTCGCTGGGACAGAGAGGGAGGAAAGCTTT
ACCCGGACCGAATCGGTGGCGAGGTGGTCGCGAGAGGGTCAAGCAGAGTA
TGAGGCTGAGAGAAGGTCTGCTGTTCGATTTTTTTCTTGGACCGGCGTAA
GGTGTTCCATTCAGGCGCAAAATAATTACGTCAGAAGGGACGGGGATTTT
GTTTTCTTTTCGAAATTTTCGTTTTCATTTTTTATTGTTTATGCGGTGCT
GTGCTGTGCTCTCTCTTCCGTACATATCAAGAAGACAATAACTACCCTAC
CTGGGGAATGTACGTACCGTGGTACGTTTTGTTTTCGAAATATTTGTTTT
CATTTTCTTATTGTTTTTGCGGTGCTGTGCTGTGCTTTATCTTTCGTACA
TATCAAAACAAGACAATAAGTACCCTACCTGGGGTACGTACGTACGTACA
TGCATGTGGCGTACGGGTTGCTTTTTTGAATGAAGCATGGAGCTCTTGGC
ATTTGCAAGTCGCCTGTTTGCACGTAATTGTTTGGACCGTCTGTTCCGTT
TCATTCGTGAACGAGCGTCGCGGGCGGAACCGCCCGCCCGCGACGCGACC
GCCCGCTACGCGATGCGCTTGTATACTCGTACCAGCACGAGTAGCTATTA
GACCAGCTTTGCAGGGCGTTTCGCCGTGCCATGGTAACATCGGCGCGAAG
GTTGTCTGCGATGAAGCATGTATGAATACGTTCGTGCTGTTATGTGGCTG
CTGTTATGTCTCCTACGACACAGCAATAATTCCAACCTGGATATTTTAAG
GCGGTGATGCTCGGTACGTGAGGCTTTCGTGACAAAACGGCAAACCCCTG
TCGTACATCTCTGGAGCAGAGGAGCCCACCAACAAAAACAAACCCGGATA
TTCAACTCCTTGAGCTCGGTATCACACCCCTGTAACATCCAAGGTCCATT
AGATCACGTTGGCCGCTACGATCTGTAGCCTGTACATAGCCCAAAACATC
TGAAGAGCGGTTTACCGCAAGTGGTACAGAGCGTCAAAAATCGCTGCATT
AGTTTGACGGGCTCCGACCGTTACTGGTGGTACAGAGTACGAGAGTCAAT
CGCCTTACTGGCTGTACGGTATTATGCTATTTGTCAGGTTGTGGAGTGGT
ACCACCCTTGGGCTAGCCTGGCGCCAACTCTGACTCAATACATGGATGAA
CAAGACCAGGTGCTCGTATGCGGTTGCGGTAACTCGGAGATGAGTGTCGA
CATGTACGACGACGGTGAGTCGCGTGTGCCCCTGATCTAACTCTACGTTG
TTTTCCGGGTCCTGTTGCGGGGATGGTGTAGCTCAGCAACTGTCCGTTGT
CTTTTGGCGATGGGGGTTGGATGCTACCAGACTGCCACGCATGATGTTTA
GTAACGGCATCGATAGGCCAGGTATGCCACAGCCTCGAACGACGTAAAAG
TCAAACACGCTACTAGTGCCGACAACCATCCAGCGCTTGGCCGATATAAG
GGCTCAGCGCACTCATCCCCCCCTCCGTGCACGTACTTGACACGCTGACG
TCTGGTCTTGCTGCTTTTCGGAACGTGTAAGTGTGAGTCAACATATTACC
ACAACTTGTCGCCTTATTCCGTTATGGACTTGAAAGAGCTCGTGCTTCAT
GTATCGGGCGATTTGTAATCTACAGAGCAATGCGTACCAGGTACGTTTTG
TGCTTGCCGCCGGAAGGTATTCTACAAGTACATAGCCAATTGCGGTGAAA
TGTTAATATTTCGCTGGCAAAGCGAAGAAGGTGGTCTAACTTTCGGCTGT
GTCACGATCATATCGCGATCATACGGTATTACTAACAGTCTTTTCGCCTT
CAAGCACTCGAGCTATGATAATCTGTCTTCTCGTAGACTATCCATCTAAT
TAACGTGGACAACGGATCAATGTCTCCCCCGCATAACCTTGCACCTGATA
TATTGCAATCGCTGCCGATTCGCCTCTCGCAGGGTTCGAGAATATTTTCA
ACGCGGATATATCTCGGGTCGTGATCGACCAAATGCAGGACACTTGCAAG
GAGTACTCCATGGAGTGTGAGTTTGAGTTGGCAGCAGCGGACAGTGTCGT
GTGTTAAGATGGTACCCCCGAGGAAGAAAGACAGGGGCGATTCAATATTG
CGGGTGATCACCTTACTTCCGTCGTTTGCATACGTACAAGGAGGAGAAAA
TCAACATGTATATGACCTACGAGGCATACTCCGTATGGTATGTTAAGCGC
ACACGATTTGGCCGTGGAGAAGCACGCAGAGCCACGAGCGAGGTTTTACA
GTTCGTCGCAACATGATTTCTTCCACCGTCGGAAGGTATTAAACAGTCGA
TCGTCTGTCTCATCAAACGACGACGAGACTCGCCGAACACCGATGGCGAC
GAGGTTGCGCTTCATCGCCTTGCGTAACGGTGACGTCTGGCGTAGAATGT
GGGTCAAATCATGCACGTATCATGTTATAGCACTCCACAACACATGCCGG
TCGTCTCGATCCTGTGTCATCAATGCATCGTTCGTGCGTAGTTTTGGCAA
AGCTTCTTGTCGATGTTGCCTCTTCTGATCCCGTTTGTATACTCCGTTTG
TTTTGTGTTGCGACTGGTCCGCTATGCTTAGGGAAGTCGGTGGATCTGAC
TCGCGAAGCGTTTTCGGCAGAGAAATTCGACGTTGCGTTGGACAAGGCCT
GCCTCGATTCAATCGTATGTAGCACGCAGGTCCGGACGGACAACTATCTT
CAACAGATAGATAGGTAAGCATTGCTCGTAGGGCAAGGTACAGGATGTGG
CTGATGCTGTTTTTGCTATATTCCCAGTACTTCGCTTATATTCGAAAGCG
TCGAAACGACGGAAAGGTGAAATACGACATGTGCGTGCAATTCAGCAGCA
TACGATACGTAGGCGTCGCCATTTCTTTGCAGCACTTCAAGATTTTCGGG
TGCAATACTTTATCCTAGCTTAGTTATAGCGTTTTTTCGAGAGCATGGCA
CTACTGCATGAATGAAGGGTTATTAATAGTCTACCCAAGAAAACCCACGC
GCCTTTTATTCACCATGAGCGCCAAACGTACGAAGCACTTTCCCCCCGGC
GATCAGAGACAGGTGCGCCTTCTTGAAATTAAATTTGATGCGCGCTGCGT
TAACACTTTCTGGTGCGCTTTTGTTGTTGTTATTGTTGTTGTTATCTCAG
GATACTACAGCCGGAAGGGGCCTTCATCTGCGTATCGTTCGCACCTCCTG
AAGACCGCCTCGAGATGTTAGAGTACTGGGATTTAGACCATCCGGAAAAG
TGCCTTGCGTGGGACGTGCATGTCGACGCGATAGGTGATTTATTCGATAA
TCAGCTTACCGTACTTTAATGTCATTGTTGAGCCTATCGCACACTAGTGT
TTCTTCTTATCGCACGCAGCTGTTGACCTTATCTTACACAAGCGATGGCT
TTATCACATACGAGTGGGATATTTATTGTGATGTTTAACCTGCCCAGTAC
GTTTTTTAACTTATTTACCTGGTGTGATATTTATAGAATATACTACTACG
GCGTTATTTATAAACAAAATGTTTGTATTTTCAGAGTATAACGTGTTTAT
GCCGCGGGTACGAGCGTAGTTCAGCAAGGGCAGGTCTTGGGTTTTTATGT
CCTCTTGATTTTTTCTTGTAATACTGCGAGATCTATACACGACGCAAGGT
GGTGACGTGGTGCAGTTCTTGAGTTCTATGCATGCTGGTGGGAATCTCCT
GCGAAACACCACACTGTCGTATTAGAATTGTCTCTCGATAACTGCTGACA
AACCGGCATATTATATCTTACCCTTCGGTATTCATGTTGAGCATTTGTGT
TTTTTTTTTATTATATTTGCCGGCGAGATGTAAGTCAAAGGTGCATTGCA
AGTGGAAGGTGCGTTGTAAGTAAAAGGTGCAAAAATGGCGCTTACTACGA
AACAGCAGCATCAGTTTTTGGCCTATTATTTTTTTGACTGACGGGAAGAG
GCTCTTCATCACCTGATGATTTTTTTTGTATTAAATTCCCCTCGCTTTTT
CTTAAAATTCAAGTTTTGAGCGAGGTATGTATGAAAGCTCGTCAAGTAAG
GAGAGGAATCTCATCAAAATTGGTCGCGCCAATACCGTACATAATAGCAT
GCGTCCCTACTGAATATATATACTGTATATTTTATATATTGTGTATGCTG
TACACCAGTACCAGGTACAAGGCGAGACGAACGACAACAATGGCAAGCCG
CGGCATTGGCCACGGCATGAGCCTTCTTTGTGTGAAGATATACGTTGTTT
TGTTCACACGGTCGCATGCCTGCGCAGTTTCAAGGTAACGCACTGAAGTA
CGCCGAAAATCATGGTGGTGCTGTTATGCTAAGATTTTATTTCTTCATGT
ACCGCACCACTCTGGGCGGTACTATTGCCCCCATCTGGACCCTCATGTTA
ATATCAAACGTTGACTGTATTCCGGGAGAGAGTGGTGTGCTCGCACGAGG
GAAACCCACGCCTCGCCCCCAAACCCCTACCCTGGGGGGGTGCATGTTGC
TTGTCCACCCCCAGTGTCCCCGTGCTGAACATTGAGGTATCATCACCATC
ACAAACATCCAGAACGCAACCTGTGTAGCAAAAATCAAGCGCATTCCACA
AGCGCCCTGCCCCGCCTCGCCCTTCGTCCAACGATGTCTGCGGGCACTAT
GCGGCCACTGCACGATCACTGCACGGTTCTTCATTGCGCGGTCTCGGCGT
GATGACTACATCGCCACAGCTAAGCCGGAATTGCAGAGGGGGCGGACGAA
ACGCGCCGAGAGTGACGGGGATTTTTACATTTACGTGTGCATCAAAGACC
CCGGCAAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1307:13180..19387+

>mRNA_M-pyrifera_M_contig1307.5838.1 ID=mRNA_M-pyrifera_M_contig1307.5838.1|Name=mRNA_M-pyrifera_M_contig1307.5838.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2166bp|location=Sequence derived from alignment at M-pyrifera_M_contig1307:13180..19387+ (Macrocystis pyrifera P11B4 male)
CGAGAAGATGGCGGCAAGAGCGACAGCGTTGATAGCTCAAGCGAGAGCAA
CAACCGAAGAAGCGGCGCCATCAACAGCGGCAGCATCGGCAGCAGTAGCA
GCAGTATCTCTGATTCGGGTGGTACAGGCAGCAGCAGCAGCAGCAGCAGT
AGCGACAGCGGCTCCTCTGAGAGAGAGGTGGGTGCCCGGAAGGCTATCGT
TGGCTATGACTCGGGAAGAAGTAGTGGTTCGACCTCTGCTTCGAGGCGTG
GCGGGGGCTCAAGTAGTTCGAGTTCGAACAGCGAGAGCAGCGGTCTTGCA
GAGGCGGTGGGCGGAGGCACCCTCAAGAGCCGCATGAAGGCGCTCTTCAA
AAAGCAGGAGGTGGAGGTGGTGAAGACCGAAGAGCTGGGTGATATTAAGG
ACAGCGAGAAGATGGCGGCAAGAGCGACAGCGTTGATAGCTCAAGCGAGA
GCAACAACCGAAGAAGCGGCGCCATCAACAGCGGCAGCATCGGCAGCAGT
AGCAGCAGTATCTCTGATTCGGGTGGTACAGGCAGCAGCAGCAGCAGCAG
CAGTAGCGACAGCGGCTCCTCTGAGAGAGAGGTGGGTGCCCGGAAGGCTA
TCGTTGGCTATGACTCGGGAAGAAGTAGTGGTTCGACCTCTGCTTCGAGG
CGTGGCGGGGGCTCAAGTAGTTCGAGTTCGAACAGCGAGAGCAGCGGTCT
TGCAGAGGCGGTGGGCGGAGGCACCCTCAAGAGCCGCATGAAGGCGCTCT
TCAAAAAGCAGGAGGTGGAGGTGGTGAAGACCGAAGAGCTGGGTGATATT
AAGGACAGGGTGGATACCCAGCTCTTGGCGGAAGTGCAAGAGTATGAAGC
AGCGCCGTCGGAAGCGGCTTCGTACGGTGTGAACACCTTTTGGGACGGAC
GTTATGCCGACGACTTAGAGGGTGGATACCCAGCTCTTGGCGGAAGTGCA
AGAGTATGAAGCAGCGCCGTCGGAAGCGGCTTCGTACGGTGTGAACACCT
TTTGGGACGGACGTTATGCCGACGACTTAGAGGTTGTGGAGTGGTACCAC
CCTTGGGCTAGCCTGGCGCCAACTCTGACTCAATACATGGATGAACAAGA
CCAGGTGCTCGTATGCGGTTGCGGTAACTCGGAGATGAGTGTCGACATGT
ACGACGACGGTTGTGGAGTGGTACCACCCTTGGGCTAGCCTGGCGCCAAC
TCTGACTCAATACATGGATGAACAAGACCAGGTGCTCGTATGCGGTTGCG
GTAACTCGGAGATGAGTGTCGACATGTACGACGACGGGTTCGAGAATATT
TTCAACGCGGATATATCTCGGGTCGTGATCGACCAAATGCAGGACACTTG
CAAGGAGTACTCCATGGAGTGGTTCGAGAATATTTTCAACGCGGATATAT
CTCGGGTCGTGATCGACCAAATGCAGGACACTTGCAAGGAGTACTCCATG
GAGTGGAAGTCGGTGGATCTGACTCGCGAAGCGTTTTCGGCAGAGAAATT
CGACGTTGCGTTGGACAAGGCCTGCCTCGATTCAATCGTATGTAGCACGC
AGGTCCGGACGGACAACTATCTTCAACAGATAGATAGGGAAGTCGGTGGA
TCTGACTCGCGAAGCGTTTTCGGCAGAGAAATTCGACGTTGCGTTGGACA
AGGCCTGCCTCGATTCAATCGTATGTAGCACGCAGGTCCGGACGGACAAC
TATCTTCAACAGATAGATAGGATACTACAGCCGGAAGGGGCCTTCATCTG
CGTATCGTTCGCACCTCCTGAAGACCGCCTCGAGATGTTAGAGTACTGGG
ATTTAGACCATCCGGAAAAGTGCCTTGCGTGGGACGTGCATGTCGACGCG
ATAGGATACTACAGCCGGAAGGGGCCTTCATCTGCGTATCGTTCGCACCT
CCTGAAGACCGCCTCGAGATGTTAGAGTACTGGGATTTAGACCATCCGGA
AAAGTGCCTTGCGTGGGACGTGCATGTCGACGCGATAGCTAAGCCGGAAT
TGCAGAGGGGGCGGACGAAACGCGCCGAGAGTGACGGGGATTTTTACATT
TACGTGTGCATCAAAGACCCCGGCAAGCTAAGCCGGAATTGCAGAGGGGG
CGGACGAAACGCGCCGAGAGTGACGGGGATTTTTACATTTACGTGTGCAT
CAAAGACCCCGGCAAG
back to top