mRNA_M-pyrifera_M_contig13007.5820.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13007.5820.1
Unique NamemRNA_M-pyrifera_M_contig13007.5820.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: A0A6H5KIW4_9PHAE (Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW4_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 1.520e-100
Identity = 184/262 (70.23%), Postives = 205/262 (78.24%), Query Frame = 1 
Query:    1 GDTVMSLRLSEARQLVSRYQQKK-NRDKAVAXXXXXXXXXXT------PTGSVGARRG--RVEEQAHG--------GTEAGLMKLMDRVVMSLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERRK 735
            G+ + S+RLSEAR L+SRY++KK N  KAVA XXXXXXXXX       P   V    G    +E A G        G E  LM+L +R VM+L +GVSRAH++PP SGALLQELYTRDGAGLLISRDIYDGIR ANP D+PGI +II PLEKKG LVPR  E+LEADI  NEFFVITRD  VLGVAFFKRYGQDHAEVGCLAIH DYRKRGWGEA+LSYLERVA+ASSV+HLFVLST TMQWFVERGF +S VSDLPPERR+
Sbjct:  408 GEIIKSMRLSEARSLLSRYEKKKSNNGKAVAAXXXXXXXXXVDLDKDLPPAEVEMADGVSADKEAAVGRGGARDVHGVEQRLMRLTERAVMALTQGVSRAHVVPPTSGALLQELYTRDGAGLLISRDIYDGIRPANPMDIPGIREIIVPLEKKGILVPRTPEQLEADI--NEFFVITRDETVLGVAFFKRYGQDHAEVGCLAIHRDYRKRGWGEAMLSYLERVALASSVQHLFVLSTVTMQWFVERGFRESQVSDLPPERRE 667
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: D7FJG3_ECTSI (Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG3_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 1.460e-81
Identity = 154/262 (58.78%), Postives = 176/262 (67.18%), Query Frame = 1 
Query:    1 GDTVMSLRLSEARQLVSRYQQKK-NRDKAVAXXXXXXXXXX------TPTGSVGARRGRV--EEQAHGGTEAG--------LMKLMDRVVMSLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERRK 735
            G+ + S+RLSEAR L+SRY++KK N  +AVA                +P   V    G    +E A GG  AG        LM+L ++ VM+L +GVSRAH++PP SGALLQELYTRDGAGLLISRD+                           LVPR  E+LEADI  NEFFVITRD  VLGVAFFKRYGQDHAEVGCLAIH DYRKRGWGEA+LSYLERVA+ASSVKHLFVLST TMQWFVERGF +S VSDLPPERR+
Sbjct:  229 GEIINSMRLSEARSLLSRYEKKKSNNGEAVAAGSGAGAMAAVDVEKDSPPAEVEMAGGVAADKEAAVGGGSAGDVHGVEQRLMRLTEKAVMALTQGVSRAHVVPPTSGALLQELYTRDGAGLLISRDMI--------------------------LVPRTPEQLEADI--NEFFVITRDETVLGVAFFKRYGQDHAEVGCLAIHRDYRKRGWGEAMLSYLERVALASSVKHLFVLSTVTMQWFVERGFRESQVSDLPPERRE 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: A0A7S3F148_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F148_9EUKA)

HSP 1 Score: 201 bits (511), Expect = 5.370e-59
Identity = 99/180 (55.00%), Postives = 125/180 (69.44%), Query Frame = 1 
Query:  193 LMKLMDRVVMSLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERR 732
            +++L    V +L  GV+RAH+LPP  GA++QELYT DG G LISRD+YDGIRLA P DVP I ++IAPLE+KG LV R    L  D+ +  ++V TRD  +LG A  KRY  + AE+GCL +   YRK+G G+A+L YLER AIA+ VK  F LST TMQWF+ERGF +   S LP  RR
Sbjct:  165 MLQLCHHCVRALEGGVTRAHLLPPTPGAIIQELYTADGMGTLISRDLYDGIRLATPADVPQIVELIAPLERKGVLVTRDRGALARDVHKGFYYVFTRDTLILGCANLKRYTPEMAELGCLVVAPAYRKQGHGDAMLCYLERTAIAAGVKRFFALSTHTMQWFIERGFFEKDASALPEVRR 344
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: A0A7S2V141_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V141_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.910e-57
Identity = 94/180 (52.22%), Postives = 127/180 (70.56%), Query Frame = 1 
Query:  196 MKLMDRVVMSLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERRK 735
            + +M   + +L+KGV+RAHI+ P SGA++QELYTRDG+G L++RD+Y+ IR A   DVPGI +II PL++ G LVP+  E +E ++    + V TRD  VL VAF +R+G  HAE+G L +H  YRK G G+ +L Y+ERVA A+ V   F LST TMQWFVERG+ +  VSDLP  RR+
Sbjct:  148 LNIMHAAIQALSKGVTRAHIIGPYSGAMIQELYTRDGSGTLLARDLYEDIRRAEVGDVPGILEIIEPLQEAGLLVPKNREYIEQEM--KHYHVYTRDGMVLAVAFLRRFGPHHAEIGSLGVHPRYRKAGRGDTMLGYMERVAAAAGVHTTFALSTQTMQWFVERGYSEGKVSDLPEARRE 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: A0A7S4IVR8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IVR8_9EUKA)

HSP 1 Score: 189 bits (479), Expect = 8.200e-57
Identity = 94/166 (56.63%), Postives = 116/166 (69.88%), Query Frame = 1 
Query:  235 GVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERR 732
            GV+RAHILPP  G L+QELYT DG G LI+RD+YDGIRLA P DVPGI ++IAPLE++G LV R   KL  D+ +  ++V TRD  +LG A  KRY    AE+GCL +   YRK+G G+A+L +LER AIA+ V+  F LST TMQWF ERGF    +  LP  RR
Sbjct:    1 GVTRAHILPPTPGTLIQELYTADGMGTLIARDLYDGIRLATPADVPGIVELIAPLERRGILVTRDRGKLANDVHQGFYYVFTRDTVILGCANLKRYTPVMAELGCLVVAPAYRKQGHGDAMLCFLERTAIAAGVRCFFALSTHTMQWFNERGFSPVGLDFLPEARR 166
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: A0A7S4N0L1_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0L1_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.920e-55
Identity = 93/170 (54.71%), Postives = 122/170 (71.76%), Query Frame = 1 
Query:  223 SLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERR 732
            +L +GV RAHIL P +GALLQELYTRDG+G+LISRD+Y+GIR A+  DV GI D+I PL + GTLVPRP   +E DI  N ++V TRD+ ++     KR+   +AE+GCL +  DYR +G G+A+L YLER+ +      +FVLST TM+WFVERGF + +V  LPP RR
Sbjct:  322 ALERGVKRAHILAPTNGALLQELYTRDGSGILISRDLYEGIRPADVNDVAGIYDLIDPLVRMGTLVPRPRSVMEKDI--NSYYVYTRDDLIVATGQLKRFEGGYAEIGCLVVSRDYRSQGRGDAMLGYLERLCLQCGASKVFVLSTQTMEWFVERGFREVNVDALPPSRR 489
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: A0A7S1URK8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URK8_9STRA)

HSP 1 Score: 186 bits (472), Expect = 5.310e-55
Identity = 93/175 (53.14%), Postives = 125/175 (71.43%), Query Frame = 1 
Query:  217 VMSLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKH---LFVLSTSTMQWFVERGFEQSSVSDLPPERR 732
            + +L +GV RAHI+ P SGALLQELYTRDG+G LISRD+Y+GIR AN  DV GI ++IAPL ++GTL+ RP   LE DI  + ++V TRD+ ++     K++  D AE+GCL +  +YR +G G+A+L YLER+ +  S +     FVLST TM+WFVERGFE+ SV  LPP R+
Sbjct:   56 ISALEQGVKRAHIIAPSSGALLQELYTRDGSGTLISRDLYEGIRRANVHDVVGIHELIAPLIRQGTLIDRPKSVLEKDI--DSYYVYTRDSLIVACGQLKKFENDFAEIGCLVVKGEYRSQGRGDAILGYLERLFLHESNEETGKFFVLSTQTMEWFVERGFEEVSVEKLPPSRQ 228
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: A0A7S2UF80_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF80_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.630e-54
Identity = 95/169 (56.21%), Postives = 119/169 (70.41%), Query Frame = 1 
Query:  223 SLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPER 729
            +L KGV RAHI+ P +GALLQELYTRDG+G+LISRD+YDGIR A   DV GI D+I PL K GTLV RP E LE DI    ++V TRDN ++     KR+    AE+GCL +  +YR +G G+A+L YLER+ + S    +FVLST TM+WF+ERGF  + V DLPP R
Sbjct:  455 ALQKGVKRAHIIAPSNGALLQELYTRDGSGILISRDLYDGIRQATVGDVAGIYDLITPLIKVGTLVDRPREVLERDI--QSYYVYTRDNLIVACGQLKRFENSFAEIGCLVVSKEYRSQGRGDAMLGYLERLCLQSGATKIFVLSTQTMEWFIERGFTAAKVEDLPPTR 621
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: B8CFS8_THAPS (Amino-acid N-acetyltransferase n=3 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFS8_THAPS)

HSP 1 Score: 188 bits (478), Expect = 9.660e-54
Identity = 94/172 (54.65%), Postives = 121/172 (70.35%), Query Frame = 1 
Query:  217 VMSLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERR 732
            +++L KGV RAHIL P +GAL+QELYTRDG G LISRDIY+GIR A+  DV GI D+I PL + GTLV RP  +LE + L   ++V TRD  V+     KR+    AE+GCL +  DYR+ G G+A+L YLER+A+    K +FVLST TM+WFVERGF++  V  LPP R+
Sbjct:  250 MVALEKGVKRAHILAPENGALVQELYTRDGCGTLISRDIYEGIRRADVNDVSGIYDLIDPLVRAGTLVERPKSQLEKEAL--SYYVYTRDGLVVATGQLKRFEGGFAEIGCLVVSKDYRRGGRGDAMLGYLERLALQCGAKKVFVLSTQTMEWFVERGFKEVPVESLPPSRQ 419
[Close]
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Match: A0A7S3NMT5_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMT5_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.050e-52
Identity = 97/184 (52.72%), Postives = 123/184 (66.85%), Query Frame = 1 
Query:  187 AGLMKLMDRVVMSLNKGVSRAHILPPVSGALLQELYTRDGAGLLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRNEFFVITRDNAVLGVAFFKRYGQDH--AEVGCLAIHHDYRKRGWGEALLSYLERVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERR 732
            A L+ L D  V +L +GV RAH++PP  G+LLQELYTRDGAG LI+ DIY+GIR A P D+  I  +IAPLE+ GTL+ RP ++L  DI    ++VI R+   +  A  KR       AE+GCL +   YR    G+ALLSYLERVAIA+ + HLF LST TMQWF+ERGFE+     LP +RR
Sbjct:  355 AQLIDLCDWSVKALQRGVVRAHLVPPSQGSLLQELYTRDGAGTLIASDIYEGIRTAKPEDLDSILALIAPLEQDGTLIQRPRDQLRTDIAAGCYYVIAREQLPIACAMLKRLDSHGKAAELGCLVVDSQYRNLAKGDALLSYLERVAIANKITHLFALSTRTMQWFIERGFEEVDFESLPSDRR 538
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13007.5820.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIW4_9PHAE1.520e-10070.23Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus ... [more]
D7FJG3_ECTSI1.460e-8158.78Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus ... [more]
A0A7S3F148_9EUKA5.370e-5955.00Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2V141_9STRA2.910e-5752.22Amino-acid N-acetyltransferase n=1 Tax=Fibrocapsa ... [more]
A0A7S4IVR8_9EUKA8.200e-5756.63Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S4N0L1_9STRA4.920e-5554.71Amino-acid N-acetyltransferase n=1 Tax=Odontella a... [more]
A0A7S1URK8_9STRA5.310e-5553.14Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2UF80_9STRA4.630e-5456.21Amino-acid N-acetyltransferase n=1 Tax=Attheya sep... [more]
B8CFS8_THAPS9.660e-5454.65Amino-acid N-acetyltransferase n=3 Tax=Thalassiosi... [more]
A0A7S3NMT5_9STRA1.050e-5252.72Amino-acid N-acetyltransferase n=1 Tax=Aureoumbra ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13007contigM-pyrifera_M_contig13007:676..5845 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.8
Seed ortholog evalue2.5e-66
Seed eggNOG ortholog2880.D7FJG3
Preferred nameNAGS1
KEGG rclassRC00004,RC00064
KEGG koko:K14682
KEGG ReactionR00259
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acetyl-CoA:L-glutamate N-acetyltransferase activity
EggNOG OGsCOG0548@1,KOG2436@2759
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-14_006230.1
EC2.3.1.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size738
Cds size726
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815805.506003-CDS-M-pyrifera_M_contig13007:675..8371622815805.506003-CDS-M-pyrifera_M_contig13007:675..837Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 676..837 -
1692277578.626223-CDS-M-pyrifera_M_contig13007:675..8371692277578.626223-CDS-M-pyrifera_M_contig13007:675..837Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 676..837 -
1622815805.5183702-CDS-M-pyrifera_M_contig13007:1628..17221622815805.5183702-CDS-M-pyrifera_M_contig13007:1628..1722Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 1629..1722 -
1692277578.638567-CDS-M-pyrifera_M_contig13007:1628..17221692277578.638567-CDS-M-pyrifera_M_contig13007:1628..1722Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 1629..1722 -
1622815805.5319707-CDS-M-pyrifera_M_contig13007:2469..25411622815805.5319707-CDS-M-pyrifera_M_contig13007:2469..2541Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 2470..2541 -
1692277578.647854-CDS-M-pyrifera_M_contig13007:2469..25411692277578.647854-CDS-M-pyrifera_M_contig13007:2469..2541Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 2470..2541 -
1622815805.544887-CDS-M-pyrifera_M_contig13007:3421..34991622815805.544887-CDS-M-pyrifera_M_contig13007:3421..3499Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 3422..3499 -
1692277578.6574667-CDS-M-pyrifera_M_contig13007:3421..34991692277578.6574667-CDS-M-pyrifera_M_contig13007:3421..3499Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 3422..3499 -
1622815805.558076-CDS-M-pyrifera_M_contig13007:4398..44961622815805.558076-CDS-M-pyrifera_M_contig13007:4398..4496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 4399..4496 -
1692277578.6669028-CDS-M-pyrifera_M_contig13007:4398..44961692277578.6669028-CDS-M-pyrifera_M_contig13007:4398..4496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 4399..4496 -
1622815805.570842-CDS-M-pyrifera_M_contig13007:5611..58331622815805.570842-CDS-M-pyrifera_M_contig13007:5611..5833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 5612..5833 -
1692277578.6765513-CDS-M-pyrifera_M_contig13007:5611..58331692277578.6765513-CDS-M-pyrifera_M_contig13007:5611..5833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13007 5612..5833 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815805.5814278-UTR-M-pyrifera_M_contig13007:5833..58451622815805.5814278-UTR-M-pyrifera_M_contig13007:5833..5845Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13007 5834..5845 -
1692277578.6859338-UTR-M-pyrifera_M_contig13007:5833..58451692277578.6859338-UTR-M-pyrifera_M_contig13007:5833..5845Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13007 5834..5845 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13007.5820.1prot_M-pyrifera_M_contig13007.5820.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13007 676..5833 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13007.5820.1

>prot_M-pyrifera_M_contig13007.5820.1 ID=prot_M-pyrifera_M_contig13007.5820.1|Name=mRNA_M-pyrifera_M_contig13007.5820.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
MSLRLSEARQLVSRYQQKKNRDKAVAAAAAETAPPPTPTGSVGARRGRVE
EQAHGGTEAGLMKLMDRVVMSLNKGVSRAHILPPVSGALLQELYTRDGAG
LLISRDIYDGIRLANPRDVPGITDIIAPLEKKGTLVPRPSEKLEADILRN
EFFVITRDNAVLGVAFFKRYGQDHAEVGCLAIHHDYRKRGWGEALLSYLE
RVAIASSVKHLFVLSTSTMQWFVERGFEQSSVSDLPPERRK*
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mRNA from alignment at M-pyrifera_M_contig13007:676..5845-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13007.5820.1 ID=mRNA_M-pyrifera_M_contig13007.5820.1|Name=mRNA_M-pyrifera_M_contig13007.5820.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5170bp|location=Sequence derived from alignment at M-pyrifera_M_contig13007:676..5845- (Macrocystis pyrifera P11B4 male)
GGCGACACGGTCATGAGCCTCCGTCTCTCGGAGGCGAGACAGTTGGTGTC
GCGCTATCAGCAGAAGAAGAATAGGGACAAAGCCGTCGCCGCCGCTGCTG
CCGAGACGGCCCCTCCGCCAACCCCAACGGGGAGCGTGGGCGCGAGGAGG
GGGAGGGTGGAGGAGCAAGCGCACGGTGGAACCGAGGCAGGGCTGATGAA
GCTCATGGACAGAGTGGTCATGTCGCTGAACAAGGTGGGCTGCTGTGCGT
GGGTCGGGTTGGGTTGGGTTTGGTTCGGTTGGGTTGGATTGGGCTAGGTC
TGTTGCATACCGGAATGTGTATCGTGTGGCGCTTGTCGGGGGGGAGGGAG
GGTGGTCAGGCGCCGGCCGGGACATTTCCCCCCCCCTCAGAAATCTTGAC
GTTGAGAAGCGCTCGCCCGCCCACGCCGTCCCACCACTCCCACCTCCACC
TCCGACACCCACCCACAACACACACGACGAGGAGCTTGCTTCCCATTGGT
TTCCTCTCTTGGAGTTGGAAAGGACCAACCGCGCGCAGCTCAAGCCCCCC
CTTTTCCTCTCCCCCCTGTATGGTCATACGACTACGGCCATGCATGATAA
TGAGTACACCCCCCCTCCCCCCCCCCCCCCCCCTCTCTACCACGCGACCT
CTCTTTTTTTACCCACGCCGCATTCGTTCATCGTCTTCAGTCCTGGAGGC
TTCGCGCCCCCCGCCTTTTCTCTCTCCCCTCGCCTCTCTCCCTTCAATGG
CCGTACGACTACGGCGATGCATGACATAAGTACACCCCTTTCCTCTCCCT
TTCTACTCCTTACCCCCCTCCCCTCGCTTCTCTTTGGCGGTCAACACGGC
TGGCTGGTGGCCGAGCTAGATCATTTTGTGCGCGGTGGAGACCCTTCACT
CCGCAAAAGAGGGATAGCCGTATCTATGTAGTGCGTACCAGGTATATGGT
GACGCACCCACAAGGCAGTTACATACGTATTATACCCATTGCTGTAAGTG
GCCACACCAGGCAATAAATCCTTTTGTTCGACGCTGTCATCCATACGCAG
GAAAATTCGCCCCACGAGCGGTTATTAGTAGGATGCAGCTCACTCTCCAT
GCGACTCGCAGAACACCTCACCTCGCTTCACGCTTGGTGCAACAAGCAAT
GTCTGCCTGGTCAGTGAAAACCCGACGCGCTCAGTCCCGGCATTGTAGGG
ATGCGTGGGTCTACGATCATACGACTACGGCCATGCATGGTATGAGTACA
CCCCCCCTCCCCCCTCTGGCACATGATTGAACTCAGCCCCCTCTCCGCCC
CCGCCTTAAACGTTTTTTGTTTGTTTCTTTCCTGCTGTTGCCCCGCCAGG
GCGTGTCTAGGGCGCACATCCTTCCTCCCGTTTCCGGGGCGCTTCTCCAG
GAGCTCTACACGCGGGATGGGGCCGGTTTGCTCATTTCGAGAGACATGTG
GGTGTCCCTCGCCGGGCTCGCTCGCTCGTTTAGCTCTCTTCGGTGGGCCC
CGGCACGGTCTCGTCTGGGCAGTTTCTTTGTCGTGACGGTTTCGTCGCCG
CGACGATTCGTCGTCGTGACGGTTTTAGTTGTCGTCGTGGCGGTTTCGTC
GTCGTACCAGTCTCTTCGTCGTGGTCGTTGTTGTGGCGGTTTCGTCGCTA
TGATGGTTTGTCGTCGCTATGATGGTTTATTCGTGAGGTTTCTTTTTCGG
GATGTTTTCTCCGTCGTGACGGTTTTGCTGGCATAACTGTTTCTTCTTCG
TGACGATGTTGTCGTCGTGACGGCTACTTGGTCGTGACGGGTTCACTCTC
GTAGTGGGTTCTCTTGGTCGTGACGGGTGTCCTCGTCGTGACGGTGTTGT
CGTCTTGACGGTTTCTTCGTCGTGACGGTTTTATCGTTGTGATGGTTTTG
CCGTCGTGACGGTTTCATCGCCGCGACGATTTCTTCTTCGCAACGGTTTC
GTTGTCTTGACGGTGTCTTCGTCGTAACGGTTTCTTTTTCGTGACGATTT
CTGGTTCGCGACGGTTTCATCGCCGCGACGGTCTCGCCATCGCAACACTC
AACCCACCCATCCTCCCACCCCACCCTAGCCCAAAATTCCTTCTTGTGTG
AAACCTTCTTCACCACTTATTCTGTGACCCGAAACCGCCCTCTCCGATCG
CTTCCGCTGCCGCCGCCTCTGCCGCTGCTGCCGCCGCGGCTGCTGCTGCC
ACCGCCGCCCCTCATCGCTGCCCCCCCCTTTTGTACCCACCAACGCTGCA
CCGCACCGCGCTGCGCCGCGCGATCGCTACCGATTCTTCCGCCCCTTCCG
GCCACCGACCATCCCCGCGACTAATTACATTCGCGACGGGGACCAGCTAC
GATGGCATTCGGCTAGCTAATCCCAGGGACGTTCCCGGAATCACGGACAT
CATCGCCCCCCTTGAGAAGAAAGGGTGAGGGGCGACCACTTCCATAGAAA
ATTGCTAGTAATAGCACGCATATATGGCGGAAACATCCATTTATTTCTCG
ATCCTTTATTTTTTGGTCGTTTTGAGATGTTATAATAGCCGTATAATGCA
GACCCCACCCGACAAAACGTGTGAGGCCATGCACGTCCCGCCCGATAAAA
CACGGTGCATGTTGTGCAAGCCACTTAAGAGCGATGCCTCGGTACGTACA
AGGAGTTCCACTTTTCTGCTTTTTGAGGCAATTTTTTCCTGGCCGGTTGA
GATCCTCTCAGATGAGCGACTCCTGTGTACATGTAGCATGATATTTTTTT
GCACTGAAGTATACGTGTGTTGGGACTCATAGCGCGCCCGTGGAAACGTT
TGGTTAGGATTGCGCGATCGAGGTTCTTTGAAATAATTTTTGTTTCGGGT
GAGGTATTGAGCTCCTTTCTCATGCGAGGAGCTCAGAAAATAAGAGACCA
CCCCTACAGGGTATTGCTCTTGATTCAGTTTTGAGATATATCTGCCCAAA
GTAGATTTATCTGCTCAAAATACAAAGATCATGAAATGGGAGGCTGGTCA
GCTCGATGTGGGTTACCATTCCACTTTTTTTTTGTTGTTTCCCCTCCGTG
GCCTCCTCTTCCGCTGCCGCCGCTGTCGCCCCGGCGCCCGCACGTGTTGG
CAGAGGCGTTGTGGTTGCTGTCGGATACTGTCGCTGTTCTTTGGTGTTGT
TTCCCAAGGTTCACTAATGCGAAATATATTTCCACGGAGGGGTAATCCTC
CCCCTCCGATATCTTTGTGTTTATTCGTTTCGTTCGCTTGTGTGTTCGTT
TGTTTATTCGTGTGTGTGTTTGTTTTTCGTTGGTCTGTTTTGTATTTGTC
GAAGGACGCTTGTCCCGAGGCCTTCAGAGAAGCTGGAAGCAGACATATTA
CGGAACGAGTTCTTCGTCATCACCAGGTCAGTCAGTCAGGCAGTAGTGTC
GCTTTTGTTTTCCTGGGCCCCTTTTTTTCCATTTTATCCGTGACCTGAAC
TACTTCTCGTCTTCCGCCGTAGAAGACGCGTCGACCGCTGCCTGCGCCCT
CCGGCCCCCTATTCGCTGTGCCGCGGTTGCGGCTGGTGGCGGAGTTCGGC
CGAGAGCTGCCGCCGCCGCCGCCGCGCGTGCACTGGCTGCTGCGCCGACG
CCTTGGCTCGAGCCTCGCCATTGATGTTTTGCCTTGTCTGCCGTGTTGCT
GCTGCTCTGCCGGAAGGTCTTTGTAGCCCAAGGGCTGCTGTTTTTTTTTT
TCCGGCGTTTCTTGTTGTTTTTGTTATTCTTGCTTGGAAATGCGGAAGGG
AGGCAGTTCTAACAAGGCCCACTGCTGTTTTTTTATGTTGGTGTTGGTGT
TGTTGGTGTTGTTGGTGGTGGTGGTGTCGGTGTTGGTGTTGGTGTTGGTG
TTGGTGTTGGTGTTGGTGTTGGTGTTGGTGTTGGTGTCGGTGTTGGTGTT
GGTGTTGGTGTTGATGTTGCTGCTGTTGCTGCTGTTGCTGCTGTTGGTGT
TGGTGTTGCTTTTGCTGTCGTTGCTGCCGTGCCGTGTCGTACCCTGTCTC
GTTATCCGCCTCGTTATCACCTTTCAACTTGAGAAATCAAGGATGTATCC
CCCGCTTTCGGTGGCATCCGCTGTTTTTCCCGATATCGTTGGTGTTGGTG
TTGACGGTGGCCGTGGCCGATAGGGACAACGCGGTGCTCGGCGTGGCGTT
TTTCAAGAGGTACGGGCAGGACCACGCGGAGGTGGGGTGCCTTGCGATTC
ACCACGACTACCGGAAGGTGAGAGCAGGGTTACACAAGAGAGGCTGAAGC
GGACTAAAAACTGGCCAGACAGATATACTGACAGACAGGTGGACCGGCAA
ACAGGTAGATCGTCAGGCAGATATATGGACAGTCAGCAGACAAATAGTTT
GGTTGACCGATGGATCTACAGAAAGATAGACTGACTGGCAGACAGACAAG
ACAGAAGCGTAGACGGGAAGACCTACAGACAGCTATGCAAAACAAGCAAA
CAAGCGGACAAAAATGTGGGCACATATAGAGGCAGAGGGATGGGTAGGTA
GGTAAGTAGGTAGGTAGGTAGTGAGGCCTATGACTAACCACACACGCATA
CAGACGGAGAAACCGGCAGACAGGCACGCAAGAAAGACAAGACAGGTAAG
CATGCCAGCAGACAGACACGCAAGACAGGCAGACCGACGGGCGTATAAAC
GACAAGAGCGGCAGAAATATCACACACGGAGAGAGACCGACAAGAGAGAC
ACGCAGAGGGAGAGAAACATGGTTTTGTTGCGTCTTTACTTTCGTGACGT
GGCTAATAGCAGCGCTTCGGTGAATGCGCGCGCCCGCCTGTGTCTTTCTT
ATTTATTGATATTGATGCCCCCTCCCATCTGGCTTTGTTGCCGTACCCTA
CCGTACCGTGCACGAACGAGAATCACCGGCGAAAATATCTCGAGCGCCCC
TTTTGCTCAACACCATCCCTCCCCCTCCCCTCCTCTCTCCCCTGCCCCCC
CTCCCCTCCCCTCCCCTCTTCCCTGCCCCCTCCCCCCGTCACTGTTCACA
CCTTTCAGCGGGGCTGGGGCGAGGCGTTGCTCAGCTACTTGGAGCGCGTG
GCGATCGCGTCGTCGGTAAAGCACTTGTTCGTGCTGTCCACGTCTACCAT
GCAGTGGTTTGTCGAGCGAGGGTTCGAGCAGTCCAGCGTGTCCGACCTTC
CTCCTGAGCGGAGAAAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13007:676..5845-

>mRNA_M-pyrifera_M_contig13007.5820.1 ID=mRNA_M-pyrifera_M_contig13007.5820.1|Name=mRNA_M-pyrifera_M_contig13007.5820.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig13007:676..5845- (Macrocystis pyrifera P11B4 male)
ATGAGCCTCCGTCTCTCGGAGGCGAGACAGTTGGTGTCGCGCTATCAGCA
GAAGAAGAATAGGGACAAAGCCGTCGCCGCCGCTGCTGCCGAGACGGCCC
CTCCGCCAACCCCAACGGGGAGCGTGGGCGCGAGGAGGGGGAGGGTGGAG
GAGCAAGCGCACGGTGGAACCGAGGCAGGGCTGATGAAGCTCATGGACAG
AGTGGTCATGTCGCTGAACAAGATGAGCCTCCGTCTCTCGGAGGCGAGAC
AGTTGGTGTCGCGCTATCAGCAGAAGAAGAATAGGGACAAAGCCGTCGCC
GCCGCTGCTGCCGAGACGGCCCCTCCGCCAACCCCAACGGGGAGCGTGGG
CGCGAGGAGGGGGAGGGTGGAGGAGCAAGCGCACGGTGGAACCGAGGCAG
GGCTGATGAAGCTCATGGACAGAGTGGTCATGTCGCTGAACAAGGGCGTG
TCTAGGGCGCACATCCTTCCTCCCGTTTCCGGGGCGCTTCTCCAGGAGCT
CTACACGCGGGATGGGGCCGGTTTGCTCATTTCGAGAGACATGGCGTGTC
TAGGGCGCACATCCTTCCTCCCGTTTCCGGGGCGCTTCTCCAGGAGCTCT
ACACGCGGGATGGGGCCGGTTTGCTCATTTCGAGAGACATCTACGATGGC
ATTCGGCTAGCTAATCCCAGGGACGTTCCCGGAATCACGGACATCATCGC
CCCCCTTGAGAAGAAAGGCTACGATGGCATTCGGCTAGCTAATCCCAGGG
ACGTTCCCGGAATCACGGACATCATCGCCCCCCTTGAGAAGAAAGGGACG
CTTGTCCCGAGGCCTTCAGAGAAGCTGGAAGCAGACATATTACGGAACGA
GTTCTTCGTCATCACCAGGACGCTTGTCCCGAGGCCTTCAGAGAAGCTGG
AAGCAGACATATTACGGAACGAGTTCTTCGTCATCACCAGGGACAACGCG
GTGCTCGGCGTGGCGTTTTTCAAGAGGTACGGGCAGGACCACGCGGAGGT
GGGGTGCCTTGCGATTCACCACGACTACCGGAAGGGACAACGCGGTGCTC
GGCGTGGCGTTTTTCAAGAGGTACGGGCAGGACCACGCGGAGGTGGGGTG
CCTTGCGATTCACCACGACTACCGGAAGCGGGGCTGGGGCGAGGCGTTGC
TCAGCTACTTGGAGCGCGTGGCGATCGCGTCGTCGGTAAAGCACTTGTTC
GTGCTGTCCACGTCTACCATGCAGTGGTTTGTCGAGCGAGGGTTCGAGCA
GTCCAGCGTGTCCGACCTTCCTCCTGAGCGGAGAAAGTGACGGGGCTGGG
GCGAGGCGTTGCTCAGCTACTTGGAGCGCGTGGCGATCGCGTCGTCGGTA
AAGCACTTGTTCGTGCTGTCCACGTCTACCATGCAGTGGTTTGTCGAGCG
AGGGTTCGAGCAGTCCAGCGTGTCCGACCTTCCTCCTGAGCGGAGAAAGT
GA
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