prot_M-pyrifera_M_contig12996.5812.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12996.5812.1
Unique Nameprot_M-pyrifera_M_contig12996.5812.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length312
Homology
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 8.330e-67
Identity = 124/217 (57.14%), Postives = 157/217 (72.35%), Query Frame = 0 
Query:   23 KTQFFGLEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISGTLPSEWLDVNGTTTTTSNSYPLVHANETSAWLPELRTLDLRDNNIAMTVYTALQSVIGLSSLQVLDLSSNALSGNLAGSFDLHY 239
            + Q  GLEALY AT G+ W +STGW D +LGVC WYGV CDS G NVTG+SL+ N L G++S+A +   V+SLE++DLSDN+L GPV L LG+M N+  LDLS NELS FPA+WGS AS L+HLSL++N ISG+ P+ WL+V     T S+SYPLVH   +S WLPELR+L L  NN+  T Y ALQ+V    SLQ LDLS NAL+G++  +  L+Y
Sbjct:   36 EVQIAGLEALYYATNGQDWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMETLDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNV-----TDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYY 247
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: D7FVL7_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL7_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.740e-58
Identity = 133/300 (44.33%), Postives = 150/300 (50.00%), Query Frame = 0 
Query:   13 GGVGVWASYSKTQFFGLEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISGTLPSEWLDVNGTTTTTSNSYPLVHANETSAWLPELRTLDLRDNNIAMTVYTALQSVIGLSSLQVLDLSSNALSGNLAGSFDLHYCDEGGSSLSGACDTAASKTRASLLAIVLLASNSISGGLEADSLPRSMSVLTLSDNLLHGPVPEDYSQLSVFFA 312
            G  GV +SY +TQ  GLEALYNATGGE+W SS+GWRDA LGVC+WYGV CDS G NVTGL+LAGNGLAGNLS+A E F V+SL  +DLSDNELVGPVALG GLM +L  LDLSRN+LS FP SWG+EASSL+HLSL+ N ISG                                                                                                                     I G LE  S PRS+S LT+SDNLL GPVPED +QLSVF A
Sbjct:   22 GAGGVSSSYLETQQVGLEALYNATGGEQWASSSGWRDATLGVCDWYGVVCDSDGRNVTGLALAGNGLAGNLSEAVELFDVLSLISIDLSDNELVGPVALGFGLMPDLEVLDLSRNDLSYFPTSWGTEASSLRHLSLQQNEISG---------------------------------------------------------------------------------------------------------------------IEGELETHSFPRSLSALTVSDNLLTGPVPEDCAQLSVFLA 204
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A357KQ35_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A357KQ35_9GAMM)

HSP 1 Score: 67.8 bits (164), Expect = 7.210e-9
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 0 
Query:   29 LEALYNATGGERWTSSTGWRDA----ALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRN 127
            L  ++ AT G  W+++ GW  A     +G   W GVACD++G+ VTGL L    L G L D   F  + +L  +DL  N L G +   +G +++L  +++ +N
Sbjct:   40 LLEIFTATNGNTWSTNNGWGSANSICGVGTSGWVGVACDTTGDTVTGLDLGNRNLVGELPDGV-FAGLPTLNQLDLRSNHLTGALPGSIGGLASLSSIEIQQN 141
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A7S2LAZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAZ7_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.680e-8
Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 0 
Query:   19 ASYSKTQFFGLEALYNATGGERWTSSTGWR-DAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQ-VVSLEDVDLS 101
            ++Y   Q+  L++LYN +GG  W  S GW  DA    C WYGV C+   E + GL+L  N L G+LS+  +  + + +LE++DLS
Sbjct:   81 SAYIDLQYASLKSLYNVSGGVNWERSEGWENDAVQTSCAWYGVTCNFRSE-IIGLNLGSNNLVGDLSELVDALKNLPTLEEIDLS 164
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A448YZ34_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZ34_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.980e-7
Identity = 37/102 (36.27%), Postives = 49/102 (48.04%), Query Frame = 0 
Query:   29 LEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELS 130
            L  LY  T G  WT+ST W D+ L  CEW+GV CD            GN                 + ++DLSDN + GP+   LG +S+L  L++S N LS
Sbjct:  268 LCVLYYTTNGTFWTNSTDWMDSDLSECEWHGVVCD------------GNSF---------------IREIDLSDNNITGPIPYELGSLSSLKFLNMSFNLLS 342
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A6B0XT25_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B0XT25_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 5.880e-7
Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 0 
Query:    4 LLATTAPGGGGVGVWASYSK-----------TQFFGLEALYNATGGERWTSSTGW-RDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDN 103
            L+   APG   + V AS +            ++ F L ALYNATGG RWT S  W  DA  G  +W+GV  D+ G  VTGL L+G GL G L +  EF  + +L  ++LS N
Sbjct:  189 LVTAVAPGSVVISVQASSAALTATARIVVNVSERFALVALYNATGGSRWTRSGNWLTDAPTG--QWHGVTADAEGR-VTGLDLSGIGLEGRLPE--EFAHLTNLRRLNLSYN 295
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A7S4AVN8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AVN8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.110e-6
Identity = 35/103 (33.98%), Postives = 47/103 (45.63%), Query Frame = 0 
Query:   29 LEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSS 131
            L   + AT G  W  S  W DA    CEWYGVACD                             + +E++DLSDN + GP+   +G +S+L  L++S N LSS
Sbjct:  266 LCVFHYATSGNFWNKSNNWMDAERSECEWYGVACDDKN--------------------------LIIEEIDLSDNNITGPLPDEIGSLSSLKLLNMSFNLLSS 342
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A7S0BY13_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY13_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.230e-6
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 0 
Query:   55 CEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISGTLPSE 160
            C W+G+ CD+SG  VT + LA N LAG     +E + + SLE +    N  +    +G+    NL  L +   +++S  A  G  ASSL H++LR N +SG LP E
Sbjct:    8 CTWHGIECDNSGHFVTSIDLAANNLAGKRCPPSEIYVLSSLEKLAFYSNP-ISFTFIGIENALNLKTLLVDSTKITSL-AGIG-RASSLTHVNLRFNRLSGALPDE 110
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A7S3LAB8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAB8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.870e-6
Identity = 33/75 (44.00%), Postives = 43/75 (57.33%), Query Frame = 0 
Query:   24 TQFFGLEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDV 98
            T  F L   + +TGGE WT+ TGW  AA   CEW+GV+CD     VTGL L  N L+G L   +E   + SL ++
Sbjct:  298 TDRFALVTFFYSTGGESWTTRTGWLSAAP-ECEWHGVSCDDDDGRVTGLYLEQNNLSGPL--PSEMAVLASLREI 369
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BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: UPI001C889FC9 (T9SS type A sorting domain-containing protein n=1 Tax=Dyadobacter sp. NIV53 TaxID=2861765 RepID=UPI001C889FC9)

HSP 1 Score: 59.3 bits (142), Expect = 4.030e-6
Identity = 35/91 (38.46%), Postives = 45/91 (49.45%), Query Frame = 0 
Query:   29 LEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNL 119
            L  LYN T G +W +   W +     C WYG+ C      VT + LAGN LAG +    E F    L  ++L DN L G +   LG +SNL
Sbjct:   28 LVKLYNGTNGPQWKNQNNW-NTTTSPCGWYGITCSDG--RVTEIRLAGNNLAGTIPIEKEDF--TELRWLELPDNHLTGNIPAELGSLSNL 113
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FVL6_ECTSI8.330e-6757.14Hypothetical leucine rich repeat and GCG domain-co... [more]
D7FVL7_ECTSI1.740e-5844.33Hypothetical leucine rich repeat and GCG domain-co... [more]
A0A357KQ35_9GAMM7.210e-933.98Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A7S2LAZ7_9STRA6.680e-840.00Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A448YZ34_9STRA4.980e-736.27Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6B0XT25_9BACT5.880e-741.07Uncharacterized protein n=1 Tax=Gemmatimonadales b... [more]
A0A7S4AVN8_9STRA2.110e-633.98Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S0BY13_9STRA2.230e-637.74Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S3LAB8_9STRA2.870e-644.00Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
UPI001C889FC94.030e-638.46T9SS type A sorting domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 119..132
score: 51.0
coord: 214..227
score: 56.76
NoneNo IPR availablePANTHERPTHR45974:SF109coord: 81..308
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 46..163
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 81..308
NoneNo IPR availablePANTHERPTHR45974:SF109coord: 46..163
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 42..306
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 116..139
e-value: 5.8
score: 15.2
coord: 214..237
e-value: 7.2
score: 14.5
coord: 187..210
e-value: 31.0
score: 9.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 172..310
e-value: 5.2E-14
score: 53.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 32..171
e-value: 8.9E-28
score: 98.9
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 215..229
e-value: 1.8
score: 8.9
coord: 190..200
e-value: 1.7
score: 8.9
coord: 141..155
e-value: 0.76
score: 10.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12996contigM-pyrifera_M_contig12996:466..2101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12996.5812.1mRNA_M-pyrifera_M_contig12996.5812.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12996 466..2101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12996.5812.1 ID=prot_M-pyrifera_M_contig12996.5812.1|Name=mRNA_M-pyrifera_M_contig12996.5812.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=312bp
SSSLLATTAPGGGGVGVWASYSKTQFFGLEALYNATGGERWTSSTGWRDA
ALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDL
SDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRS
NNISGTLPSEWLDVNGTTTTTSNSYPLVHANETSAWLPELRTLDLRDNNI
AMTVYTALQSVIGLSSLQVLDLSSNALSGNLAGSFDLHYCDEGGSSLSGA
CDTAASKTRASLLAIVLLASNSISGGLEADSLPRSMSVLTLSDNLLHGPV
PEDYSQLSVFFA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt