mRNA_M-pyrifera_M_contig128544.5731.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A7Y2D8X9_9ACTN (NADH-quinone oxidoreductase subunit A n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D8X9_9ACTN) HSP 1 Score: 176 bits (446), Expect = 7.370e-54 Identity = 93/140 (66.43%), Postives = 111/140 (79.29%), Query Frame = 1
Query: 1 FVASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQVNTRQHEMRSSTRTTTTTIRRVGLEGRFDEVRVPARAEEVA 420
FVASKL+APRR +K APYECGIIPG+E P+RFPVRF+LVAM+FI+FDIEIIF +PWA+ HR + V GLVA+++FS LVFESFVYLI+ GALDWGPL+ + R S+ RT TTIRRVGLEGR + V A AEE A
Sbjct: 23 FVASKLFAPRRMNDKKAAPYECGIIPGKEKPERFPVRFFLVAMIFIVFDIEIIFFFPWAISHRAIGVFGLVAVLIFSALVFESFVYLISNGALDWGPLKKSRRLSPAVSADRTARTTIRRVGLEGRPEPVGAAAHAEEPA 162
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A7Y2DK86_9ACTN (NADH-quinone oxidoreductase subunit n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DK86_9ACTN) HSP 1 Score: 170 bits (430), Expect = 2.180e-51 Identity = 89/131 (67.94%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 1 FVASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQVNTRQHEMRSST-----RTTTTTIRRVGLEGR 378
FVAS+L AP R T EK APYECGIIPGREPPQRFPVRFYLVAM+F+IFDIEIIFLYP+A+ H L GL+A+++FS LVFESFVYLI+KGA+DWGPLQ N+ + T RT T+T+RRVG EGR
Sbjct: 22 FVASRLLAPSRTTQEKLAPYECGIIPGREPPQRFPVRFYLVAMMFVIFDIEIIFLYPYAVTHEALGRFGLIAIVIFSALVFESFVYLISKGAIDWGPLQYNSPVRTSAAETAVDPSRTVTSTVRRVGTEGR 152
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A7W0LTA4_9ACTN (NADH-quinone oxidoreductase subunit A n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0LTA4_9ACTN) HSP 1 Score: 169 bits (427), Expect = 3.330e-51 Identity = 85/126 (67.46%), Postives = 102/126 (80.95%), Query Frame = 1
Query: 1 FVASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQVNTRQHEMRSSTRTTTTTIRRVGLEGR 378
F AS+L APRRPT K APYECGI+P +EPP+RFPVRFYL+AM+FI+FDIEIIFLYP+A++HREL GLV M+VF++ VF SFV+LIA GALDWGP + R S+TRT TT+RRVGLEGR
Sbjct: 22 FFASRLLAPRRPTAAKSAPYECGIVPSQEPPERFPVRFYLIAMIFIVFDIEIIFLYPYAVIHRELGGFGLVEMVVFAVAVFASFVFLIANGALDWGPAKRGRRVDPRVSTTRTAATTVRRVGLEGR 147
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A7Y2IIF5_9ACTN (NADH-quinone oxidoreductase subunit n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IIF5_9ACTN) HSP 1 Score: 165 bits (417), Expect = 2.880e-49 Identity = 88/135 (65.19%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 4 VASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQVNTRQHEMRSST---------RTTTTTIRRVGLEGRF 381
+ASKL APRR T EK APYECGIIPGREPPQRFPVRFYLVAM+F+IFDIEIIFLYP+A+ H+ L GL+A+++FS LVFESFVYLI+KGALDWGPL + S T RT+ +T+RRVG EGR
Sbjct: 23 MASKLLAPRRATQEKIAPYECGIIPGREPPQRFPVRFYLVAMMFVIFDIEIIFLYPYAVTHQALGRFGLIAILIFSALVFESFVYLISKGALDWGPLNAHAPLSTSASETAGVGMSDPRRTSASTVRRVGAEGRL 157
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A6N7FQD4_9ACTN (NADH-quinone oxidoreductase subunit n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FQD4_9ACTN) HSP 1 Score: 162 bits (411), Expect = 9.010e-49 Identity = 86/138 (62.32%), Postives = 108/138 (78.26%), Query Frame = 1
Query: 4 VASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQVNTRQHEMRSSTRTTTTTIRRVGLEGRF--DEVRVPARAE 411
+ASKL PRR T+ K PYE GI+PGREPPQRF VRFYLVAM+FI+FDIEIIFLYPWAM+H EL + GL+A+ +F+ VFESF+YL++KGAL+WGP + +HEM + RT +TT+RRVG GR+ DE+ V A AE
Sbjct: 1 MASKLLGPRRVTLAKLGPYESGIVPGREPPQRFSVRFYLVAMIFIVFDIEIIFLYPWAMIHDELGLFGLLAIAMFAASVFESFLYLLSKGALEWGPRR-RVARHEMVAPERTASTTVRRVGTTGRYRPDELEVLAAAE 137
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A538DEW6_9ACTN (NADH-quinone oxidoreductase subunit A n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DEW6_9ACTN) HSP 1 Score: 162 bits (409), Expect = 1.650e-48 Identity = 82/126 (65.08%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 1 FVASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQVNTRQHEMRSSTRTTTTTIRRVGLEGR 378
F+AS L APR P K APYECGIIP +E P+RFPVRF+LVAM+FI+FDIEIIF YPWA+ H+E + GLVA++VF++ VFESFVYLI GALDWGP++ M S+ RT+ TTIRRVGLEGR
Sbjct: 22 FIASGLLAPRSPNDRKSAPYECGIIPAKETPERFPVRFFLVAMIFIVFDIEIIFFYPWAVAHKEAGLFGLVAILVFTVAVFESFVYLIGNGALDWGPVKQLRSMRSMVSAERTSATTIRRVGLEGR 147
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A6I3A6H2_9ACTN (NADH-quinone oxidoreductase subunit A n=2 Tax=root TaxID=1 RepID=A0A6I3A6H2_9ACTN) HSP 1 Score: 162 bits (409), Expect = 2.400e-48 Identity = 84/132 (63.64%), Postives = 103/132 (78.03%), Query Frame = 1
Query: 1 FVASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQ------VNTRQHEMRSSTRTTTTTIRRVGLEGR 378
FVAS L APR P K APYECGIIP +E P+RFPVRF+L+AM+FI+FDIEIIF YPWA+ H+E+ GLVA+++FS VFESFVYLIA GAL+WGP++ R +MRS+ RT+T+TIRRVGLEGR
Sbjct: 28 FVASGLLAPRSPNDRKRAPYECGIIPAKETPERFPVRFFLIAMIFIVFDIEIIFFYPWAIAHKEVGWFGLVAVLIFSFAVFESFVYLIANGALEWGPVKRLRDVSATMRLTDMRSAERTSTSTIRRVGLEGR 159
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A351KBC6_9ACTN (NADH-quinone oxidoreductase subunit A n=3 Tax=Acidimicrobiia TaxID=84992 RepID=A0A351KBC6_9ACTN) HSP 1 Score: 161 bits (408), Expect = 2.830e-48 Identity = 87/133 (65.41%), Postives = 103/133 (77.44%), Query Frame = 1
Query: 1 FVASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQVNTRQHEMRSSTRTTTTTIRRVG-----LEGRFD 384
FVAS+L APR P K APYECGIIPGRE P+RFPVRF+LVAM+FI+FDIEIIF YPWA+ HR L + GLVA+++FS VFESFVYLI GAL+WGP++ R S+TRTT++TIRRVG LEGR D
Sbjct: 23 FVASRLLAPRSPNDRKAAPYECGIIPGRETPERFPVRFFLVAMIFIVFDIEIIFFYPWAIAHRGLGLSGLVAVLLFSAAVFESFVYLIGNGALEWGPVK-RVRHDAAVSATRTTSSTIRRVGVRVVGLEGRDD 154
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A538JUI9_9ACTN (NADH-quinone oxidoreductase subunit A n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JUI9_9ACTN) HSP 1 Score: 160 bits (406), Expect = 4.580e-48 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 1 FVASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQ--VNTRQHEMRSSTRTTTTTIRRVGLEGR 378
F+AS L APRRPT K APYECGI+P REPP+RFPVRFYLVAM+F+IFDIEIIFLYPWA++ R+LA GL M+VF+ VF SFVYLI G LDWGP + +T H +S+RTT TT+RRVG GR
Sbjct: 22 FLASGLLAPRRPTAAKEAPYECGIVPDREPPERFPVRFYLVAMIFVIFDIEIIFLYPWAVIFRQLAAFGLWEMLVFAAAVFISFVYLIGNGVLDWGPAKRIASTLDHGAFASSRTTETTVRRVGTTGR 149
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Match: A0A7W0LSB3_9ACTN (NADH-quinone oxidoreductase subunit n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0LSB3_9ACTN) HSP 1 Score: 159 bits (402), Expect = 2.100e-47 Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 1
Query: 10 SKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIEIIFLYPWAMVHRELAVPGLVAMIVFSLLVFESFVYLIAKGALDWGPLQVNTRQHEMRSSTRTTTTTIRRVGLEGR 378
SKL AP RPTV K APYE GIIP REPP+RFPVRFYLVAM+FIIFDIEIIFLYPWA+++REL GLV M++F+ VF SF+YLI++GALDWGP++ RTTT+T+RRVGL+GR
Sbjct: 16 SKLLAPGRPTVAKSAPYESGIIPSREPPERFPVRFYLVAMIFIIFDIEIIFLYPWAVIYRELGTFGLVEMLLFAAAVFVSFLYLISRGALDWGPVRRRRPPEGAVDPARTTTSTVRRVGLDGR 138 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128544.5731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128544.5731.1 >prot_M-pyrifera_M_contig128544.5731.1 ID=prot_M-pyrifera_M_contig128544.5731.1|Name=mRNA_M-pyrifera_M_contig128544.5731.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp FVASKLWAPRRPTVEKYAPYECGIIPGREPPQRFPVRFYLVAMLFIIFDIback to top mRNA from alignment at M-pyrifera_M_contig128544:77..499- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128544.5731.1 ID=mRNA_M-pyrifera_M_contig128544.5731.1|Name=mRNA_M-pyrifera_M_contig128544.5731.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=423bp|location=Sequence derived from alignment at M-pyrifera_M_contig128544:77..499- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128544:77..499- >mRNA_M-pyrifera_M_contig128544.5731.1 ID=mRNA_M-pyrifera_M_contig128544.5731.1|Name=mRNA_M-pyrifera_M_contig128544.5731.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig128544:77..499- (Macrocystis pyrifera P11B4 male)back to top |