mRNA_M-pyrifera_M_contig127913.5623.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127913.5623.1
Unique NamemRNA_M-pyrifera_M_contig127913.5623.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: UPI0009E5CA6C (UDP-glucose:glycoprotein glucosyltransferase 1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5CA6C)

HSP 1 Score: 172 bits (437), Expect = 5.530e-51
Identity = 78/110 (70.91%), Postives = 93/110 (84.55%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREARDVE 330
            SA+YV+DLD+FR+  AGD +R  YQGL+QDPNSL+NLDQDLPN M  QVPI SLPQEWLWCETWC+D++K+ AKAIDLCNNPLTK PKL +AVRIV+EW  LD E R ++
Sbjct:  193 SAIYVVDLDRFRRLAAGDRLRGQYQGLSQDPNSLSNLDQDLPNNMIHQVPIRSLPQEWLWCETWCDDESKSGAKAIDLCNNPLTKEPKLQSAVRIVKEWTDLDNEVRSLQ 302
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: A0A7S0DBW0_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DBW0_MICPS)

HSP 1 Score: 173 bits (438), Expect = 1.640e-49
Identity = 76/107 (71.03%), Postives = 91/107 (85.05%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREAR 321
            SALYV+DL +FR++ AGD +R +Y+ L+QDPNSLANLDQDLPNY Q QVPIHSLPQ WLWCE+WC ++TKA+AK IDLCNNP+TK PKL  A RIV EWP+LD+E R
Sbjct:  352 SALYVVDLARFRRTAAGDQLRVIYEQLSQDPNSLANLDQDLPNYAQHQVPIHSLPQPWLWCESWCGNETKAAAKTIDLCNNPMTKEPKLLGAARIVHEWPSLDKEVR 458
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: A0A7S4K6U5_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4K6U5_9EUKA)

HSP 1 Score: 172 bits (437), Expect = 5.640e-49
Identity = 79/107 (73.83%), Postives = 91/107 (85.05%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREAR 321
            SALYV+DL +FR   AGD +R  Y GL+QD NSLANLDQDLPNYMQ Q+ I SLPQEWLWCETWC+D++K SAK IDLCNNPLTK+PKL+NAVRIV+EW +LD EAR
Sbjct:  443 SALYVVDLARFRNLAAGDRLRTTYNGLSQDKNSLANLDQDLPNYMQHQLKIFSLPQEWLWCETWCSDESKNSAKTIDLCNNPLTKTPKLENAVRIVDEWTSLDEEAR 549
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: L8H1D6_ACACA (UDPglucose:Glycoprotein Glucosyltransferase containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1D6_ACACA)

HSP 1 Score: 176 bits (446), Expect = 7.600e-49
Identity = 80/110 (72.73%), Postives = 95/110 (86.36%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREARDVE 330
            SALYVIDL +FR+  AGD++RA YQ L+QD NSLANLDQDLPN++Q +VPI SLPQEWLWCETWC+D++KA AK IDLCNNPLTK+PKL+NAVRI+ EW  LD EAR +E
Sbjct: 1436 SALYVIDLKRFREMAAGDVIRATYQQLSQDENSLANLDQDLPNFLQNRVPIFSLPQEWLWCETWCDDESKARAKTIDLCNNPLTKTPKLENAVRIIPEWRDLDEEARSIE 1545
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: A0A7S0HHP0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHP0_9CRYP)

HSP 1 Score: 160 bits (406), Expect = 9.490e-49
Identity = 73/110 (66.36%), Postives = 86/110 (78.18%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREARDVE 330
            SALYV+DL++FR  GAGD +R VY  L++DPNSLANLDQDLPNY Q  VPI SLPQEWLWCETWC++ +K  AK IDLCNNP+TK PKLD A RI+ EW  LD+    +E
Sbjct:   25 SALYVVDLNRFRAIGAGDELRVVYSQLSRDPNSLANLDQDLPNYAQHSVPIFSLPQEWLWCETWCSNSSKVKAKTIDLCNNPMTKEPKLDQARRIIGEWEELDKTISSLE 134
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: A0A6G0IET6_LARCR (UDP-glucose:glycoprotein glucosyltransferase 1 n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0IET6_LARCR)

HSP 1 Score: 163 bits (413), Expect = 1.280e-48
Identity = 76/107 (71.03%), Postives = 86/107 (80.37%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREAR 321
            SALYV+DL +FRK  AGD +R  YQGL+QDPNSL+NLDQDLPN M  QVPI SLPQEWLWCETWC+D +K SAK IDLCNNP+TK PKL  AVRIV EW   D+E +
Sbjct:   92 SALYVVDLKKFRKIAAGDRLRGQYQGLSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDSSKRSAKTIDLCNNPMTKEPKLQAAVRIVAEWTDYDQEIK 198
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: A0A383VF36_TETOB (Glyco_transf_24 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VF36_TETOB)

HSP 1 Score: 164 bits (416), Expect = 1.770e-48
Identity = 75/108 (69.44%), Postives = 85/108 (78.70%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREARD 324
            SALY+IDL +FR+ GAGD  R VY  L++DPNSLANLDQDLPNY Q  +PIHSLPQEWLWCE+WC D+TK  A+ IDLCNNP TK PKL  A RIV EWP LD+E  D
Sbjct:  107 SALYLIDLVRFRQLGAGDHYRVVYDNLSKDPNSLANLDQDLPNYAQHTIPIHSLPQEWLWCESWCGDETKPKARTIDLCNNPKTKEPKLQAARRIVAEWPGLDQEQAD 214
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: A0A368GDU5_ANCCA (Glyco_transf_24 domain-containing protein n=2 Tax=Strongylida TaxID=6308 RepID=A0A368GDU5_ANCCA)

HSP 1 Score: 160 bits (405), Expect = 2.290e-48
Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREARDV 327
            SALYVIDL +FR+  AGD +R  YQGL+ DPNSL+NLDQDLPN M  QV I SLPQEWLWCETWC+D +K+ AK IDLCNNP+TK PKLD+A+RI+ EW   D E ++V
Sbjct:   24 SALYVIDLQKFRQIAAGDRLRGQYQGLSSDPNSLSNLDQDLPNNMIHQVKIKSLPQEWLWCETWCDDASKSKAKTIDLCNNPMTKEPKLDSAIRIIPEWRDYDNEIKEV 132
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: A0A3S4ZQ39_9PLAT (Hypothetical protein n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S4ZQ39_9PLAT)

HSP 1 Score: 162 bits (410), Expect = 3.350e-48
Identity = 74/107 (69.16%), Postives = 85/107 (79.44%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREAR 321
            SALYV+DL +FR+  AGD +R  Y GL+QDPNSLANLDQDLPN M  QVPI SLPQEWLWCETWC+DD+K+ AK ID+CNNPLTK PKL  A+RI EEW   D E +
Sbjct:   58 SALYVVDLVRFRQMAAGDRLRGQYHGLSQDPNSLANLDQDLPNNMMHQVPIKSLPQEWLWCETWCSDDSKSRAKTIDMCNNPLTKEPKLSAAMRIAEEWVPTDNEIK 164
[Close]
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Match: A0A7S3E500_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E500_9CHLO)

HSP 1 Score: 165 bits (418), Expect = 3.390e-48
Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 1 
Query:    1 SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVPIHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWPALDREARD 324
            SALY++DL QFR  GAGD +R +Y GLA+DPNSLANLDQDLPNY Q  VPI SLPQEWL+CETWC   TKA AK IDLCNNP+TK PK++ A RIV EW +LDRE +D
Sbjct:  174 SALYLVDLKQFRMKGAGDELRILYNGLARDPNSLANLDQDLPNYAQDIVPIFSLPQEWLYCETWCGTKTKAKAKTIDLCNNPMTKEPKIEGAKRIVSEWTSLDREQQD 281
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127913.5623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0009E5CA6C5.530e-5170.91UDP-glucose:glycoprotein glucosyltransferase 1-lik... [more]
A0A7S0DBW0_MICPS1.640e-4971.03Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S4K6U5_9EUKA5.640e-4973.83Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
L8H1D6_ACACA7.600e-4972.73UDPglucose:Glycoprotein Glucosyltransferase contai... [more]
A0A7S0HHP0_9CRYP9.490e-4966.36Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A6G0IET6_LARCR1.280e-4871.03UDP-glucose:glycoprotein glucosyltransferase 1 n=1... [more]
A0A383VF36_TETOB1.770e-4869.44Glyco_transf_24 domain-containing protein n=1 Tax=... [more]
A0A368GDU5_ANCCA2.290e-4866.97Glyco_transf_24 domain-containing protein n=2 Tax=... [more]
A0A3S4ZQ39_9PLAT3.350e-4869.16Hypothetical protein n=1 Tax=Protopolystoma xenopo... [more]
A0A7S3E500_9CHLO3.390e-4870.37Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127913contigM-pyrifera_M_contig127913:1..348 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.9
Seed ortholog evalue2.2e-41
Seed eggNOG ortholog5786.XP_003291934.1
Preferred nameUGGT1
KEGG koko:K11718
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003980,GO:0005488,GO:0005509,GO:0005515,GO:0005537,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005788,GO:0005791,GO:0005793,GO:0006011,GO:0006139,GO:0006457,GO:0006458,GO:0006464,GO:0006486,GO:0006487,GO:0006491,GO:0006508,GO:0006515,GO:0006517,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008194,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0023052,GO:0030163,GO:0030246,GO:0030968,GO:0031967,GO:0031974,GO:0031975,GO:0032991,GO:0033554,GO:0034620,GO:0034641,GO:0034645,GO:0034976,GO:0035251,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0042221,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045995,GO:0046483,GO:0046527,GO:0046872,GO:0048029,GO:0048580,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051239,GO:0051603,GO:0051716,GO:0051787,GO:0051788,GO:0055086,GO:0061062,GO:0065007,GO:0070013,GO:0070085,GO:0070887,GO:0071218,GO:0071310,GO:0071704,GO:0071712,GO:0097359,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1904380,GO:2000026
EggNOG free text desc.UDP-glucose glycoprotein glucosyltransferase
EggNOG OGs3X8EA@554915,KOG1879@1,KOG1879@2759
COG Functional cat.G
CAZyGT24
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons1
Model size348
Cds size348
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815793.2654274-CDS-M-pyrifera_M_contig127913:0..3481622815793.2654274-CDS-M-pyrifera_M_contig127913:0..348Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127913 1..348 +
1692277572.2318509-CDS-M-pyrifera_M_contig127913:0..3481692277572.2318509-CDS-M-pyrifera_M_contig127913:0..348Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127913 1..348 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127913.5623.1prot_M-pyrifera_M_contig127913.5623.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127913 1..348 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127913.5623.1

>prot_M-pyrifera_M_contig127913.5623.1 ID=prot_M-pyrifera_M_contig127913.5623.1|Name=mRNA_M-pyrifera_M_contig127913.5623.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
SALYVIDLDQFRKSGAGDMVRAVYQGLAQDPNSLANLDQDLPNYMQAQVP
IHSLPQEWLWCETWCNDDTKASAKAIDLCNNPLTKSPKLDNAVRIVEEWP
ALDREARDVEAAHAEA
back to top

mRNA from alignment at M-pyrifera_M_contig127913:1..348+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127913.5623.1 ID=mRNA_M-pyrifera_M_contig127913.5623.1|Name=mRNA_M-pyrifera_M_contig127913.5623.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig127913:1..348+ (Macrocystis pyrifera P11B4 male)
AGCGCCCTCTACGTGATAGACCTCGACCAGTTCCGCAAGTCGGGCGCGGG
AGACATGGTGCGCGCTGTCTACCAGGGCCTTGCCCAGGACCCCAATAGCC
TCGCCAACCTCGACCAGGACCTGCCCAACTACATGCAGGCCCAGGTGCCC
ATTCACTCGCTGCCCCAGGAGTGGCTCTGGTGCGAGACGTGGTGCAACGA
CGACACCAAGGCCTCGGCCAAGGCGATCGACCTCTGCAACAACCCGCTCA
CCAAGTCGCCCAAGCTGGACAACGCCGTCCGCATCGTGGAGGAGTGGCCT
GCCCTGGACCGCGAGGCCCGCGACGTGGAGGCCGCGCACGCAGAAGCC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig127913:1..348+

>mRNA_M-pyrifera_M_contig127913.5623.1 ID=mRNA_M-pyrifera_M_contig127913.5623.1|Name=mRNA_M-pyrifera_M_contig127913.5623.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig127913:1..348+ (Macrocystis pyrifera P11B4 male)
AGCGCCCTCTACGTGATAGACCTCGACCAGTTCCGCAAGTCGGGCGCGGG
AGACATGGTGCGCGCTGTCTACCAGGGCCTTGCCCAGGACCCCAATAGCC
TCGCCAACCTCGACCAGGACCTGCCCAACTACATGCAGGCCCAGGTGCCC
ATTCACTCGCTGCCCCAGGAGTGGCTCTGGTGCGAGACGTGGTGCAACGA
CGACACCAAGGCCTCGGCCAAGGCGATCGACCTCTGCAACAACCCGCTCA
CCAAGTCGCCCAAGCTGGACAACGCCGTCCGCATCGTGGAGGAGTGGCCT
GCCCTGGACCGCGAGGCCCGCGACGTGGAGGCCGCGCACGCAGAAGCCAG
CGCCCTCTACGTGATAGACCTCGACCAGTTCCGCAAGTCGGGCGCGGGAG
ACATGGTGCGCGCTGTCTACCAGGGCCTTGCCCAGGACCCCAATAGCCTC
GCCAACCTCGACCAGGACCTGCCCAACTACATGCAGGCCCAGGTGCCCAT
TCACTCGCTGCCCCAGGAGTGGCTCTGGTGCGAGACGTGGTGCAACGACG
ACACCAAGGCCTCGGCCAAGGCGATCGACCTCTGCAACAACCCGCTCACC
AAGTCGCCCAAGCTGGACAACGCCGTCCGCATCGTGGAGGAGTGGCCTGC
CCTGGACCGCGAGGCCCGCGACGTGGAGGCCGCGCACGCAGAAGCC
back to top