mRNA_M-pyrifera_M_contig12710.5459.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: D8LLE4_ECTSI (PRLI-interacting factor L-like (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE4_ECTSI) HSP 1 Score: 117 bits (292), Expect = 1.630e-32 Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQDRKYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAPE 252
FN FM EFL ++SA+LFRSKGVLAF +Q+RK+VFQGVHEQI+CEP+ WA+ G +R SKIVFIGL+LDKD ITE K C+ PE
Sbjct: 2 FNKFMAEFLRENSANLFRSKGVLAFKDQERKFVFQGVHEQIDCEPAINGWAE-GEERVSKIVFIGLDLDKDYITESFKACIVPE 84
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: A0A6H5K110_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K110_9PHAE) HSP 1 Score: 123 bits (308), Expect = 3.300e-31 Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQDRKYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAPE 252
FN FMGEFL ++SA+LFRSKGVLAF +Q+RKYVFQGVHEQI+CEP+ WA+ G +RESKIVFIGL+LD D ITE LK C+ PE
Sbjct: 415 FNKFMGEFLRENSANLFRSKGVLAFKDQERKYVFQGVHEQIDCEPAINGWAE-GEERESKIVFIGLDLDNDYITESLKACIVPE 497
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: A0A7S3ZMM3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMM3_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.880e-22 Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQ-DRKYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAP 249
FN FM E L +ADL+RSKGVL+F Q D+K+VFQGVHEQI+ P+ T W K G R SKIVFIG NLD+ +TE++++CL P
Sbjct: 259 FNIFMAELLQTRAADLYRSKGVLSFAGQGDQKFVFQGVHEQIDFGPAQTQWQK-GERRVSKIVFIGRNLDRKFLTEKIESCLVP 341
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: A0A7S4E3I3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3I3_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 9.690e-22 Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQ-DRKYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAP 249
FN FM E L +ADL+RSKGVL+F Q D+K+VFQGVHEQI+ P+ T W K G R SKIVFIG NLD+ +TE++++CL P
Sbjct: 329 FNIFMAELLQTRAADLYRSKGVLSFAGQGDQKFVFQGVHEQIDFGPAQTQWQK-GERRVSKIVFIGRNLDRKFLTEKIESCLVP 411
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: A0A7S2K368_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K368_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.390e-20 Identity = 44/85 (51.76%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQ-DRKYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAPE 252
FN FM + L + +ADL+R+KG+L+F Q + K+VFQGVHEQIN PS W ++G +R ++ VFIG NLD+DE+T+ L CL E
Sbjct: 21 FNMFMMDLLKERAADLYRTKGLLSFQGQGNSKFVFQGVHEQINFGPSKKPW-EEGEERLNRFVFIGKNLDRDELTKGLMECLYKE 104
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: A0A7S2RIA0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIA0_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.680e-20 Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQ-DRKYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAPE 252
FN FM + L + +ADL+R+KG+L+F Q D K+VFQGVHEQIN P+ W K+G +R +K VFIG NL++DE+T+ L CL E
Sbjct: 80 FNMFMMDLLRERAADLYRTKGLLSFHGQGDTKFVFQGVHEQINFGPADKPW-KEGEERINKFVFIGKNLNRDELTKSLMECLYKE 163
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: F0YCQ7_AURAN (CobW C-terminal domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCQ7_AURAN) HSP 1 Score: 90.1 bits (222), Expect = 1.440e-19 Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQD-RKYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAP 249
FN FM E L +ADL+R+KGVL+F Q +K+VFQGVHEQI+ P+ T W KD R SKIVFIG NLD+ + E++++CL P
Sbjct: 264 FNMFMAELLQARAADLYRTKGVLSFAGQGAQKFVFQGVHEQIDFGPAKTEWQKD-EPRWSKIVFIGRNLDRKYLQEKVESCLVP 346
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: A0A7S4AE36_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AE36_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.540e-19 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQDR-KYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAPE 252
FN FM + L +ADL+R+KG+L+F QD K+VFQGVHEQIN P+ W KDG +R +K VFIG NL +DE+T+ L +CL E
Sbjct: 237 FNMFMMDLLRDRAADLYRTKGLLSFHGQDNVKFVFQGVHEQINFGPAKEGW-KDGEERINKFVFIGKNLSRDELTKSLMDCLYKE 320
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: A0A7S4EH83_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EH83_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.920e-19 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQDR-KYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAPE 252
FN FM + L +ADL+R+KG+L+F QD K+VFQGVHEQIN P+ W KDG +R +K VFIG NL +DE+T+ L +CL E
Sbjct: 257 FNMFMMDLLRDRAADLYRTKGLLSFHGQDNVKFVFQGVHEQINFGPAKEGW-KDGEERINKFVFIGKNLSRDELTKSLMDCLYKE 340
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Match: A0A7S0AEA3_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AEA3_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.370e-19 Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 FNAFMGEFLGKHSADLFRSKGVLAFTNQ-DRKYVFQGVHEQINCEPSPTVWAKDGSDRESKIVFIGLNLDKDEITERLKNCLAPE 252
FN FM + L +ADL+R+KG+L+F Q D K+VFQGVHEQIN P+ WA+ G +R +K VFIG NLD+ E+T+ L C+ E
Sbjct: 120 FNMFMMDLLKDRAADLYRTKGLLSFHGQGDTKFVFQGVHEQINFGPAKNPWAE-GEERINKFVFIGKNLDRKELTKSLMECIYKE 203 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12710.5459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12710.5459.1 >prot_M-pyrifera_M_contig12710.5459.1 ID=prot_M-pyrifera_M_contig12710.5459.1|Name=mRNA_M-pyrifera_M_contig12710.5459.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp MGEFLGKHSADLFRSKGVLAFTNQDRKYVFQGVHEQINCEPSPTVWAKDGback to top mRNA from alignment at M-pyrifera_M_contig12710:3327..4377- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12710.5459.1 ID=mRNA_M-pyrifera_M_contig12710.5459.1|Name=mRNA_M-pyrifera_M_contig12710.5459.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1051bp|location=Sequence derived from alignment at M-pyrifera_M_contig12710:3327..4377- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12710:3327..4377- >mRNA_M-pyrifera_M_contig12710.5459.1 ID=mRNA_M-pyrifera_M_contig12710.5459.1|Name=mRNA_M-pyrifera_M_contig12710.5459.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig12710:3327..4377- (Macrocystis pyrifera P11B4 male)back to top |