prot_M-pyrifera_M_contig127038.5437.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127038.5437.1
Unique Nameprot_M-pyrifera_M_contig127038.5437.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length134
Homology
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BLAST of mRNA_M-pyrifera_M_contig127038.5437.1 vs. uniprot
Match: A0A5A8E8P1_CAFRO (Fucosyltransferase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E8P1_CAFRO)

HSP 1 Score: 63.5 bits (153), Expect = 3.680e-9
Identity = 45/125 (36.00%), Postives = 60/125 (48.00%), Query Frame = 0 
Query:    3 KLNWQAEGAYVVKGCDVHCYITH-DQSKVQEADAVVMELVNHYKFFGTDTSLPLPWPERLPGKQR-------ASGLDQHWILFHYEARETCKNFLYDPSIMGHFQLTMTPDQSSDIPVSLICDWG 119
            +L W A+G  V K CD  C   H D +   +ADAVV+E VNH KF G D   P+PWP    G Q+       A GL+       Y+           P +  H   +M+   +S +PVSL+C WG
Sbjct:   19 RLLWAADGVEVNKPCDYPCKFVHGDPAVYHDADAVVVETVNHPKF-GHDGK-PMPWPV---GNQQTHTPLVGAFGLEPVEAYPRYQPTS--------PEMAAHASFSMSYLPTSTLPVSLMCPWG 130
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127038.5437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5A8E8P1_CAFRO3.680e-936.00Fucosyltransferase n=2 Tax=Cafeteria roenbergensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 19..112
e-value: 1.2E-8
score: 35.4
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 12..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127038contigM-pyrifera_M_contig127038:83..484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127038.5437.1mRNA_M-pyrifera_M_contig127038.5437.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127038 83..484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127038.5437.1 ID=prot_M-pyrifera_M_contig127038.5437.1|Name=mRNA_M-pyrifera_M_contig127038.5437.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
TTKLNWQAEGAYVVKGCDVHCYITHDQSKVQEADAVVMELVNHYKFFGTD
TSLPLPWPERLPGKQRASGLDQHWILFHYEARETCKNFLYDPSIMGHFQL
TMTPDQSSDIPVSLICDWGRQREDFLLPPPPRKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031481Glyco_tran_10_N