prot_M-pyrifera_M_contig126715.5380.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126715.5380.1
Unique Nameprot_M-pyrifera_M_contig126715.5380.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
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BLAST of mRNA_M-pyrifera_M_contig126715.5380.1 vs. uniprot
Match: A0A386C7Q9_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A386C7Q9_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 1.530e-5
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0 
Query:   13 GVGTIGLVSGAVFALKSNRADEDSRAFCVDSVC-QPEGVRLNEEAKSSALLADVQFAAGLAFVGIGGYLLLT 83
            GVG +GL +GAVF +++   + D+   C  + C  P  +  N +A++SA +A+V  A GLA VG+  YL  T
Sbjct:  193 GVGLLGLATGAVFGVRAVVRNRDANRVCPGTDCADPAALDANRDARTSASIANVGIAVGLAGVGVAAYLFAT 264
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126715.5380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A386C7Q9_9BACT1.530e-538.89Uncharacterized protein n=1 Tax=uncultured bacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126715contigM-pyrifera_M_contig126715:19..333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126715.5380.1mRNA_M-pyrifera_M_contig126715.5380.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126715 19..333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126715.5380.1 ID=prot_M-pyrifera_M_contig126715.5380.1|Name=mRNA_M-pyrifera_M_contig126715.5380.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
GNGRRNWGLGFMGVGTIGLVSGAVFALKSNRADEDSRAFCVDSVCQPEGV
RLNEEAKSSALLADVQFAAGLAFVGIGGYLLLTESGSSKRSNKTAAVPSR
PRFLG
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