mRNA_M-pyrifera_M_contig126668.5370.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: UPI0006D214BA (SO_0444 family Cu/Zn efflux transporter n=1 Tax=Desulfovibrio brasiliensis TaxID=221711 RepID=UPI0006D214BA) HSP 1 Score: 119 bits (299), Expect = 9.610e-30 Identity = 73/139 (52.52%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 4 SFFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVRLVLSK 420
SFF + V G + +L+M+AVG PLY+CATASTPIAA+LV KGLSPGAALVFLL GPATN TL + K++G+RA YL I + ++A G+ T+ LY ALDLD+ +++ A P + VA A +LL L+VR L +
Sbjct: 207 SFFREYVGQGFMPLLIMLAVGLPLYVCATASTPIAASLVLKGLSPGAALVFLLAGPATNGATLTVMFKVLGQRAAVAYLVAIAVCSVALGWLTDRLYAALDLDITAVLSGAEEALPE-WVGVASALVLLALIVRTFLVR 344
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: A0A3B8KPR9_9BACT (Uncharacterized protein n=2 Tax=Synergistales TaxID=649776 RepID=A0A3B8KPR9_9BACT) HSP 1 Score: 119 bits (298), Expect = 1.420e-29 Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 1 ASFFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLV 399
A +T+ GL+ ML +AV TPLY+CATASTPI A+L KGLSPGAALVFLL GPATN T+L VT+++GK+A AIYL I++ +L G A N LY L LD +A+A+ EP F+ + L LLL+
Sbjct: 207 ADLIPETLGTGLLSMLAALAVSTPLYVCATASTPIVASLALKGLSPGAALVFLLAGPATNVTSLTVVTRILGKKASAIYLSTIIVSSLLLGLAVNMLYNTLGLDTSKWLAKAIEDEPGLFSLTSAIVLSLLLL 339
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: W4LBX4_9BACT (Protein HflK n=1 Tax=Candidatus Entotheonella factor TaxID=1429438 RepID=W4LBX4_9BACT) HSP 1 Score: 119 bits (298), Expect = 2.170e-28 Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 1
Query: 4 SFFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVRLVLSKIGP 429
+FFT VP G LLM+ +GTP+YICA A+TP+A L+AKGL PGAALV LLVGPATNATT+L + +L+GKR + ++L G+ AL G +A+Y L +DL T+ AE + S A VA A L++LLV + ++ P
Sbjct: 232 NFFTLYVPAGWAAYLLMLVIGTPIYICAAAATPVAVALIAKGLDPGAALVLLLVGPATNATTMLVIGRLLGKRILVVHLIGVTGCALILGAILDAIYPLLGIDLSTIAAEVVHRGLSPVAVVAAAILIVLLVRSAIRIRLMP 373
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: A0A6J4XLP6_9DELT (Uncharacterized membrane protein, YraQ family n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XLP6_9DELT) HSP 1 Score: 115 bits (288), Expect = 2.180e-28 Identity = 73/144 (50.69%), Postives = 95/144 (65.97%), Query Frame = 1
Query: 1 ASFFTDTVPD---------GLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVR 405
A F T +PD GL MLLM+A+G PLYICATASTPIAA L+ KG+SPGAALVFLLVGPATN +L VT ++GKRA AIYLG I + A+ G A + +Y ++ + + +V +A P + Q GA L+L+L V+
Sbjct: 128 AGFITVLIPDDIFSTYLGSGLSAMLLMLAIGIPLYICATASTPIAAALILKGVSPGAALVFLLVGPATNVASLTVVTGILGKRATAIYLGAIAVSAVFFGLAVDQVYTSMGISAQAMVGQASEVMP-LWVQWVGALLVLILSVK 270
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: A0A7C8HXG6_9DELT (Putative two-component membrane permease complex subunit n=1 Tax=Halodesulfovibrio sp. MK-HDV TaxID=2599925 RepID=A0A7C8HXG6_9DELT) HSP 1 Score: 116 bits (290), Expect = 2.720e-28 Identity = 67/147 (45.58%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 4 SFFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVRLVLSKIGPAAHDH 444
+FF + V DGL+ M+LM+ +G P+Y+CATASTPIAA L KGLSPG ALVFLL GPATNA T+ V + +GKR IY+G I + ++ G A N LY L L + + + + AH+ + G A ++L+V + IG H H
Sbjct: 216 TFFQEYVGDGLLSMILMVVIGVPMYVCATASTPIAAALALKGLSPGGALVFLLAGPATNAATITVVAQTLGKRVAFIYVGSIAVTSVILGLAVNWLYAKLGLSVFSWINDVEAHQHG----IVGYASAIILLVLVGKQFIGRRGHQH 358
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: W4LK81_9BACT (Protein HflK n=2 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4LK81_9BACT) HSP 1 Score: 118 bits (296), Expect = 4.050e-28 Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 4 SFFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVRLVLSKIGP 429
+FFT VP G LLM+ +GTP+YICA A+TP+A L+AKGL PGAALV LLVGPATNATT+L + +L+GKR +A++L G+ AL G + LY AL +DL T AE + S A A A L+ LV + ++ P
Sbjct: 234 NFFTLYVPRGWAAYLLMLVIGTPIYICAAAATPVAVALIAKGLDPGAALVLLLVGPATNATTMLVIARLLGKRILAVHLIGVTGCALLLGAILDELYPALGIDLSTAAAEVVHRGLSPIAAAAAAILIFFLVRSAIRIRLMP 375
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: B3EE98_CHLL2 (Permease n=2 Tax=Chlorobium limicola TaxID=1092 RepID=B3EE98_CHLL2) HSP 1 Score: 115 bits (288), Expect = 5.150e-28 Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 1
Query: 43 MLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVRLVLSKIGPAAHDH 444
MLLM+A+ PLY+CATASTPIAA L KG+SPGAALVFLL GPATNA + + KLIG+RA +Y+ IV ++ AG A NALY AL +D+ +A A AHE + + A L++LV R ++ + AH H
Sbjct: 233 MLLMLAISVPLYVCATASTPIAAALALKGISPGAALVFLLAGPATNAAAITVIAKLIGRRATVVYVAVIVAMSFLAGIAVNALYGALGIDITGWLA-ASAHEEGSLVAMLSAVALIVLVARAMM--LPAKAHAH 363
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: M5Q3A3_DESAF (Putative permease n=1 Tax=Desulfocurvibacter africanus PCS TaxID=1262666 RepID=M5Q3A3_DESAF) HSP 1 Score: 110 bits (276), Expect = 6.090e-28 Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 1
Query: 1 ASFFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVRLVL 414
A F + G+V ML+M+ VG P+++CAT+STP+ A L AKGLSPGAALVFLL GP TNA T+ + +++G+R A+YL I +V+L G A + LY +L LD+ V EA E A +A A +LL+LV+R VL
Sbjct: 32 AGFIEQHLGSGIVPMLIMLGVGMPIFVCATSSTPVVAALAAKGLSPGAALVFLLAGPVTNAATVTVLGRILGRRITAVYLATIAVVSLGMGLAVDWLYVSLALDISGWVREAGVEEGGPVA-LASAVILLILVLRAVL 168
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: A0A1T4WL26_9DELT (Uncharacterized protein n=2 Tax=Paradesulfovibrio TaxID=2910986 RepID=A0A1T4WL26_9DELT) HSP 1 Score: 115 bits (288), Expect = 6.180e-28 Identity = 68/138 (49.28%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 7 FFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVRLVLSK 420
FFT+ + +L+M+ G PLY+CATASTPIAA+L KGLSPGAALVFLL GPATNA T+ V++++GK+AV+IYLG I + +L G+ TN +Y +L +D+ + V E E + F+ V +LL LV R + K
Sbjct: 236 FFTEMLGGEWTSLLVMLVFGVPLYVCATASTPIAASLALKGLSPGAALVFLLAGPATNAATIAVVSRVLGKKAVSIYLGSIAICSLGLGWLTNKIYASLGMDITSWVRETHIDEVTPFSIVC-VVVLLALVFRSLRKK 372
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Match: Q317G3_OLEA2 (Uncharacterized protein n=2 Tax=Oleidesulfovibrio alaskensis TaxID=58180 RepID=Q317G3_OLEA2) HSP 1 Score: 115 bits (289), Expect = 6.460e-28 Identity = 72/150 (48.00%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 4 SFFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALVFLLVGPATNATTLLDVTKLIGKRAVAIYLGGIVLVALAAGYATNALYQALDLDLRTLVAEAMAHEPSTFAQVAGAALLLLLVVRLVLSKI---GPAAHDH 444
+FF + DGL+ ML+M+ VG PLY+CATASTP+AA + KGLSPGAALVFLL GPATNA T V +L+G++ A+YL I + ++A G A N LY L L + + V A A +A A +LL LV L I G AH H
Sbjct: 246 TFFASYLGDGLMSMLVMLVVGMPLYVCATASTPVAAAMAVKGLSPGAALVFLLAGPATNAATFTVVARLMGRKVAAVYLASIAVCSIALGLAVNWLYAYLGLSITSWVGAAQEESHGVIA-IASAVVLLGLVAYRTLPGIIRRGHNAHGH 394 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126668.5370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126668.5370.1 >prot_M-pyrifera_M_contig126668.5370.1 ID=prot_M-pyrifera_M_contig126668.5370.1|Name=mRNA_M-pyrifera_M_contig126668.5370.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp ASFFTDTVPDGLVGMLLMIAVGTPLYICATASTPIAATLVAKGLSPGAALback to top mRNA from alignment at M-pyrifera_M_contig126668:61..507- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126668.5370.1 ID=mRNA_M-pyrifera_M_contig126668.5370.1|Name=mRNA_M-pyrifera_M_contig126668.5370.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig126668:61..507- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126668:61..507- >mRNA_M-pyrifera_M_contig126668.5370.1 ID=mRNA_M-pyrifera_M_contig126668.5370.1|Name=mRNA_M-pyrifera_M_contig126668.5370.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig126668:61..507- (Macrocystis pyrifera P11B4 male)back to top |