mRNA_M-pyrifera_M_contig10250.537.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10250.537.1 vs. uniprot
Match: D7FYM2_ECTSI (FkbM family methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYM2_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 3.550e-177 Identity = 437/960 (45.52%), Postives = 561/960 (58.44%), Query Frame = 1
Query: 91 DDSSISFASEALTPIKRHHAPPSTRQDLATSSPPAWRPAEWSRSIDVGNDYHLNKSFPTG-GGRE-EDVTARLYSSASGTDSSADEAERRYQSTIRARRHNS--HGRMGVASYKHSGRDQRRA-----------ELDEAARRLRSQLAAARSQLEQKEIVTRSLQRQLDERGEIEQQTQARAEEDLVAALAKASGLKEELARTSQLLVDGALERQHLEQRCSVLTQDLHKSVERRDDLEGQVSESRAELVRVSGALHARRGTDVVDAEMAFGEELQRVQESAMREARSLRQETGELRASLAQTKDRLRKACGERDAWREEAEVRANEVNSLRETVSALRQYSENDTIDQLLGQASEAPISRWKRRAENLEQLQR-ASSPEGPSCFGSVSDMETSPSGGSVQRSFPVAEQPETGEVLRAVDPATMPPVQRSEELGEVSLEGLQDENKALRQELLEAKKSLLVLKEEVAAAMLAAREHASKRMASEVRVKSLEGEAEASARAARENMVARRAAKAKAYAELKATIREDMGAEAGRLRCLFEEHRQDEKS-QGAGEAPPCKCFGGSTPQPPGVDKSCQAGDASASAEMERAGDAQLVSL-------CAPLACEGGCANSATNESSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AATWAKTFFSARQLILAALLSLFEHTTTLL--DAEGNSKHALVEMLSKRLEAAGSLDPDAQESNAMVPWAPGETNTEASTALEVLREGVKSTIEGIRSALAEHATRTVP------------QATA-----ASTAVQH---------------ATTASPTEKEGEIVELQKGVESGQEVCTRRCTVEVEVGEPDERSSERSVGAGGADAAPAWEGGRSGRASFRRESDGDRERRRQLPDDAMVEEFRRKSDVLSEALQRAETEKEDLKRSLTQRFERQQAIELERQQAGYELEVSELHAYTMAIVQE 2790
D S +SF SE TP K H+ P S R D +++ WRP WSR +D + + G GGRE DVT R+YSS+S S A E +ST R RH H R ++ H R R E L ++L RSQ+EQK++V RSLQRQLD+RGE+E QTQARAEEDLVAALAKASGLKEEL RTSQLLVDGAL RQHLEQRCSVLT++L K+ R +LE +V+ SRAE+VR+SGALHARR TDVVDAE AFGEELQRVQESA RE R+L QE LR L QTK +LR ACGERD+WREEA+ ++E +LRETV ALRQYSENDTIDQLLGQ +SRWKRRAE LE LQR ASSPE + GS S+ E S SV+ P E G L A T + EE +V +G + E +LRQEL EAKKSL++ EEVAAA+L AR+ A+ R A+E V+ L+ +AEA+ARAARE++VARRAAKA+ A LK I++DM E +L+C + RQ+E+ G + +C G + +P G+DK+CQ+ + AS + +V A AC A+S + SS+ A WA F +AR+L AL+SL E L DA+GN + ALV LS + +L +A S+AMVPWAP E +A+ A+EVLR+ V+S++E RSALA+H RT P Q TA ++TAV AT+ S T++ G IVEL+ +R V V+ G +E + GAGG APAWEGG R S + DGDR R + D A +EE K+ LS ALQRAE EK +L+RSLT+RF+R++A++L++Q+ YE ++ LH TMA++Q+
Sbjct: 33 DASLVSFGSEEPTPTKHHYVPRSPRDDAYSNTARPWRPVGWSRVVDTSVPTAVVDNPEAGLGGREVADVTTRIYSSSS---SCATE-----RSTERVARHQGKRHHRHTDSAADHERRTDRXXXXXXXXXXXXXETASTVALLTNELVIVRSQIEQKDVVVRSLQRQLDQRGELEAQTQARAEEDLVAALAKASGLKEELTRTSQLLVDGALARQHLEQRCSVLTEELQKTATRTTELENEVAVSRAEVVRISGALHARRSTDVVDAERAFGEELQRVQESAARETRTLGQEASGLRTLLEQTKSKLRNACGERDSWREEADSFSSEAATLRETVQALRQYSENDTIDQLLGQ-----VSRWKRRAEELENLQRVASSPERSAFDGSSSETEPSRCTESVEP-LPSPTM-EGGPPLAAEAIPTTVFQEEKEEHEKVLGDGHEAEIHSLRQELSEAKKSLVMKGEEVAAAVLEARQQAAMRAAAESCVEGLQRKAEANARAAREHVVARRAAKARDMANLKIAIQQDMVDELHKLQCEVRKQRQEEQQLHGTTDTGLSECSGERSREPVGLDKACQSDNTIASIASSSTEEGVVVESNILNKVGAACPACGVDLADSGADGSSIVASPKVTVVLEDEAERRVSAALASAAVAQVGATAWASAFSAARRLFHTALVSLCEQADCLFGADAKGNGRQALV--LSPLVGLTTALRNEA--SSAMVPWAPSEAEADAAAAMEVLRDDVESSMERFRSALADHLVRTAPLSLTLTMATVGSQTTAEPPTDSTTAVSRTXXXXXXXXXXXLPRATSGSQTDEVG-IVELK---------VDQRHNVGVQAGNLGGWRTETAPGAGGRGGAPAWEGGMDSRCSEGEKYDGDRSWRPKSEDHARMEELELKAGALSAALQRAEKEKSNLERSLTRRFKREKAMQLKKQRDKYEADIGALHVSTMALLQD 963
BLAST of mRNA_M-pyrifera_M_contig10250.537.1 vs. uniprot
Match: A0A6H5JZ16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ16_9PHAE) HSP 1 Score: 360 bits (924), Expect = 1.910e-112 Identity = 231/385 (60.00%), Postives = 270/385 (70.13%), Query Frame = 1
Query: 1 MEALSRKTEKEKVEELEEMLADATLSGDVTDDSS-ISFASEALTPIKRHHAPPSTRQDLATSSPPAWRPAEWSRSIDVGNDYHL-NKSFPTG-GGRE-EDVTARLYSSASG--TDSSADEAERRYQSTIRARRHNSHGRMGVASYKHSGRDQRRAELDEAARR----------LRSQLAAARSQLEQKEIVTRSLQRQLDERGEIEQQTQARAEEDLVAALAKASGLKEELARTSQLLVDGALERQHLEQRCSVLTQDLHKSVERRDDLEGQVSESRAELVRVSGALHARRGTDVVDAEMAFGEELQRVQESAMREARSLRQETGELRASLAQTKDRLRKACGERDAWREEAEVRANEVNSLRETVSALRQYSENDTIDQLLGQA 1107
MEALSRKTEKEK+ +LE MLADAT SGDVTDD+S +SF SE TP K H+ P S R D A+++ WRP WSR +D + N G GGRE DVT R+YSS+S T+ S + R R RH A+ D+RR + R L ++L RSQ+EQK++V RSLQRQL++RGEIE QTQARAEEDLVAALAKASGLKEEL RTSQLLVDGAL RQHLEQRCSVLT++L KS R +LE +V+ SRAE+VR+SGALHARR TDVVDAE AFGEELQRVQESA RE R+L+QE LR L QTK +LR ACGERD+WREEA+ ++E +LRETV ALRQYSENDTIDQLLGQA
Sbjct: 1 MEALSRKTEKEKLADLEAMLADATCSGDVTDDASLVSFGSEEPTPTKHHYVPRSPRDDAASNTAGPWRPVGWSRVVDTSVPTVVDNPVLEAGVGGREVADVTTRIYSSSSSCTTERSTERVVPRRHQGKRPHRH-------TAADHERRTDRRRRQRHPTPERDHETAATVALLTNELVIVRSQIEQKDVVVRSLQRQLEQRGEIEAQTQARAEEDLVAALAKASGLKEELTRTSQLLVDGALARQHLEQRCSVLTEELQKSATRTAELENEVAVSRAEVVRISGALHARRSTDVVDAERAFGEELQRVQESAARETRTLKQEASGLRTLLEQTKSKLRNACGERDSWREEADSFSSEAATLRETVQALRQYSENDTIDQLLGQA 378
BLAST of mRNA_M-pyrifera_M_contig10250.537.1 vs. uniprot
Match: A0A6H5K4I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I8_9PHAE) HSP 1 Score: 208 bits (529), Expect = 2.600e-54 Identity = 194/514 (37.74%), Postives = 269/514 (52.33%), Query Frame = 1
Query: 1381 ALRQELLEAKKSLLVLKEEVAAAMLAAREHASKRMASEVRVKSLEG----EAEASARAARENMVARRAAKAKAYAELKATIREDMGAEAGRLRCLFEEHRQDEKS-QGAGEAPPCKCFGGSTPQPPGVDKSCQAGDASASAEMERAGDAQLVSL----CAPLACEGGCANSATNESSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AATWAKTFFSARQLILAALLSLFEHTTTLL--DAEGNSKHALVEMLSKRLEAAGSLDPDAQESNAMVPWAPGETNTEASTALEVLREGVKSTIEGIRSALAEHATRTVPQATAASTAV--QHATTASPTEK-----------------------------EGEIVELQKGVESGQEVCTRRCTVEVEVGEPDERSSERSVGAGGADAAPAWEGGRSGRASFRRESDGDRERRRQLPDDAMVEEFRRKSDVLSEALQRAETEKEDLKRSLTQRFERQQAIELERQQAGYELEVSELHAYTMAIVQE 2790
+LRQEL EAKKSL + EEVAAA+L AR+ A+ R +E V+ L+ +AEA+ARAARE++VARRAAKA+ A LK I++DM E +L+C + RQ+EK G + KC G + +P GVDK+CQ+ D AS+ E + L A AC +S + SS+ A WA F +AR L AAL SL E L DA+GN + ALV LS + +L +A S+AMVPWAP E +A+ A+EVLR+ V+S+++ I+SALA+H+ RT + A + A T SPT+ E I+EL+ G +R V V+ G R E + GAGG APAWEGG R DGDR R + D A ++E K+ LS ALQR+E EK L+RSLT+RF+R++A++L++Q+ YE ++ LHA TMA++Q+
Sbjct: 35 SLRQELSEAKKSLAMKGEEVAAAVLEARQQAAMRAVAESCVEGLQATLGRKAEANARAAREHVVARRAAKARDMANLKIAIQQDMVNELHKLQCEVRKQRQEEKKLHGTKDTELSKCSGERSREPVGVDKACQSDDTIASSSKEEGVMMESDILNRVGAACSACGVDLTDSGADGSSIVASPKVTVVLEDEAEKRVSAALASAAMAQVGATAWASAFSAARCLFHAALASLCEQADCLFGADAKGNGRQALV--LSPLVGLTTALRDEA--SSAMVPWAPSEAEADAAAAMEVLRDDVESSVKRIQSALADHSERTAALSLALTMATVGSQTTAESPTDSAITVSXXXXXXXXXXXXXXXXXXXXSQTDEVGIMELKVG---------QRHNVGVQTGYLGGRRPETAPGAGGRGGAPAWEGGMESRCREGETYDGDRLWRPKSEDHARMDELELKAGALSAALQRSEKEKSSLERSLTRRFKREKAMQLKKQRDKYEADIGALHASTMALLQD 535 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10250.537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10250.537.1 >prot_M-pyrifera_M_contig10250.537.1 ID=prot_M-pyrifera_M_contig10250.537.1|Name=mRNA_M-pyrifera_M_contig10250.537.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=930bp MEALSRKTEKEKVEELEEMLADATLSGDVTDDSSISFASEALTPIKRHHAback to top mRNA from alignment at M-pyrifera_M_contig10250:711..7225+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10250.537.1 ID=mRNA_M-pyrifera_M_contig10250.537.1|Name=mRNA_M-pyrifera_M_contig10250.537.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6515bp|location=Sequence derived from alignment at M-pyrifera_M_contig10250:711..7225+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10250:711..7225+ >mRNA_M-pyrifera_M_contig10250.537.1 ID=mRNA_M-pyrifera_M_contig10250.537.1|Name=mRNA_M-pyrifera_M_contig10250.537.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5580bp|location=Sequence derived from alignment at M-pyrifera_M_contig10250:711..7225+ (Macrocystis pyrifera P11B4 male)back to top |