mRNA_M-pyrifera_M_contig12665.5365.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12665.5365.1
Unique NamemRNA_M-pyrifera_M_contig12665.5365.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 4.040e-148
Identity = 386/738 (52.30%), Postives = 437/738 (59.21%), Query Frame = 1 
Query:    1 VELESVGEEVLSDAVYLLLSLLRQSVPIKPLVSAVAHVLTLVAALTGG-VAGGARNLERHPALGSLLRALFIRVSNRSVRRAACAVLFRASYWQALGRDASATAVGSGGDDEAVMGAAGVXXXXXXXXXXXXTAAKSVRRAP----ARSNELANVLLGSLKADLARVKTTPSARGGXXXXXXXXGPCIEGLSPVRRPRAGAARTTDKDSGGGSIGGVGNGGGRGIGEGLVPVIVPRLHLVEVTEFVAGLVHVMLESARATATAGTAGAGRQLPPGGSGXXXXXXXXXXXXXXXXXXXXXXXPGSRVGATAARAPVLPVIASRDKETGLS-----VPGGIAPGARSVGGGGGVEGTGDSAGCRNKESSAAAAEWLLEEAARRLAAHEFTETFKSDASDRLLVSLLHALTVAVAGSGRRKRLAETLFSNLALA----------SSPXXXXXXXXXXKPTSSALLPRSGLIRFLYEGCLFPPACEQEPAGEQAGSAPANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAESSLGPRCKKRESRRAAFALLSALCRGEEGHLRRAFVLLGGRDLMTRSFLESDVGDDGGESWRVATAAEAS----AGGHLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALDDMSGAG--SGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPLQEEDDVLLQLQV 2136
            V+LESVG  VLSD V+LL+SLLRQS P+KPLVSAVAHVLTLV +L+GG +AGGAR LERHPALGSLLRAL IR+   SVRR+AC+VL RAS WQALGR+ S  + G  G      GA G              A+ + R        R+NELA VLL SL+ADLARV+  P AR          G     LSPVRR R G    TD               G G+G G  P++VPRLHLVEVT FVAGLVHVMLE+A  ++    A   RQ  P                                    AR  VLP  A RD ETG S     +   +A  A  V  G         +    +E ++ AAEWLLEEAARRLAAHEFTETF+SDA D +L++LLHALTVAV+GS RRKRLAETLFS L+ +           S             T  A +PR GLIRFLYE CLFPPA  +EP            XXXXXXXXXXXXXXXXXXXXXXXXXXXX  VAESSLGPRCKKRESRRAAFALLSALCRG E HLR+AFVLLGGRDL+T+ FL+SD+ D G       +A+++S    A G  G                                      VA D   GAG  SGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHV  FSL+LLGL PDRR  G    +PLQE+D+VLLQLQV
Sbjct: 2071 VDLESVGGSVLSDVVHLLISLLRQSTPVKPLVSAVAHVLTLVGSLSGGGLAGGARALERHPALGSLLRALCIRIPESSVRRSACSVLHRASAWQALGREPSCCSGGGVGAGAGAAGAVGRVVASRNGGGEVAAASSTARLGKDGPETRNNELARVLLASLRADLARVQAVPFARSAGPGAAVRVG-----LSPVRRAR-GDVTATD---------------GCGVG-GSAPIVVPRLHLVEVTAFVAGLVHVMLENASLSSFPPPAVPPRQPRPAAG------LPQQQELSTNRQTARHPQXXXXXXXLPARPSVLP--ADRD-ETGTSNDAARLVASVATAAGGVSRGADTASVNGESNEGERERASTAAEWLLEEAARRLAAHEFTETFESDAPDHVLITLLHALTVAVSGSPRRKRLAETLFSRLSSSXXXXXXXXXXGSCSSWAAAGVAASATGVAHVPRPGLIRFLYERCLFPPA-SREPXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKRESRRAAFALLSALCRGNEAHLRQAFVLLGGRDLVTKGFLDSDM-DSGNLGSEDGSASDSSVVAVADGSRGESHG----------------------------------VATDASGGAGVRSGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVQDFSLQLLGLVPDRRAGGGESNHPLQEQDEVLLQLQV 2734
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BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE)

HSP 1 Score: 479 bits (1232), Expect = 6.200e-145
Identity = 401/734 (54.63%), Postives = 452/734 (61.58%), Query Frame = 1 
Query:    1 VELESVGEEVLSDAVYLLLSLLRQ---SVPIKPLVSAVAHVLTLVAALTGG-VAGGARNLERHPALGSLLRALFIRVSNRSVRRAACAVLFRASYWQALGRDASATAVGSGGDDEAVMGAAGVXXXXXXXXXXXXTAAKSVRRAPARSNELANVLLGSLKADLARVKTTPSARGGXXXXXXXXGPCIEGLSPVRRPRAGAARTTDKDSGGGSIGGVGNGGGRGIGEGLVPVIVPRLHLVEVTEFVAGLVHVMLESARATATAGTAGAGRQLPPGGSGXXXXXXXXXXXXXXXXXXXXXXXPGSRVGATAARAPVLPVIASRDKETGLS--VPGGIAPGARSVGGGGGVEGTGDSAGCR--------NKESSAAAAEWLLEEAARRLAAHEFTETFKSDASDRLLVSLLHALTVAVAGSGRRKRLAETLFSNLALASSPXXXXXXXXXX----KPTSSALLPRSGLIRFLYEGCLFPPACEQEPAGEQAGSAPANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAESSLGPRCKKRESRRAAFALLSALCRGEEGHLRRAFVLLGGRDLMTRSFLESDVGDDGGESWRVATAAEASAGGHL-GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALDDMSGAG---SGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPLQEEDDVLLQLQV 2136
            V LESVG  VLSD V+LL+SLLRQ     P+KPLVSAVAHVLTLV +L+GG +AGGAR LERHPALGSLLRAL IR+ + SVRR+AC+VL RAS WQALGRD S  +    G       ++              TA      A  R+NELA VLL SL+ DLARV+  P AR           P   GLSPVRR R G A   +  + G  +GG              P++VPRLHLVEVT FVAGLVHVMLE+A  ++    A   RQ  P                      XXXXX         AR  VLP  A RD ETG S    G +A  A + GG   V    D+A            +E ++ AAEWLLEEAARRLAAHEFTETF+SDA D +L++LLHALTVAVAGS RRKRLAETLFS L+ +   XXXXXXXXXX      T  A +PR GLIRFLYE CLFPPA  +EP                    XXXXXXXXXXXXXXXXXXXX  VAESSLGPRCKKRESRRAAFALLSALCRG E HLR+AFVLLGGRDL+T+ FL+SD+ D G       +A+++S      GS                     XXXXXXXXXXX       L+D SG     SGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHV  FSL+LLGL PDRR  G    +PLQEED+VLLQLQV
Sbjct: 1073 VNLESVGGSVLSDVVHLLISLLRQVHRGTPVKPLVSAVAHVLTLVGSLSGGGLAGGARALERHPALGSLLRALCIRIPDSSVRRSACSVLHRASAWQALGRDPSCCSEARNGXXXXXXXSS--------------TAKLGKDGAEKRNNELARVLLTSLRTDLARVQAVPFARSAGPGA-----PVRVGLSPVRRAR-GDATAAETAAIGSGVGGS------------APIVVPRLHLVEVTAFVAGLVHVMLENASLSSFPPPAVPPRQPRPAAGLPQQQELSTNRQAPRHPQQXXXXXXXXXXXXXXARPSVLP--ADRD-ETGTSKDAAGLVASVAAAAGG---VSRGADTASVNVNGERDEGERELASTAAEWLLEEAARRLAAHEFTETFESDAPDHVLITLLHALTVAVAGSPRRKRLAETLFSRLSSSXXXXXXXXXXXXXXXXXSATGVARVPRPGLIRFLYERCLFPPA-SREPXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKRESRRAAFALLSALCRGNEAHLRQAFVLLGGRDLVTKGFLDSDM-DSGNLGSEDGSASDSSVIAVADGSRGASHGVATVAGDGAEEATAAXXXXXXXXXXXPSTPAATLEDASGGAGVRSGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVQDFSLQLLGLVPDRRAGGGESSDPLQEEDEVLLQLQV 1751
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BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S3MAA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAA4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.890e-10
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 1 
Query: 1915 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDR-KKNPLQEEDD----VLLQLQV 2136
            W+YDP ++LKE   +VGL NQG TCYMNS +QQL+H+P+F   LL +    +   D    N L+E+ D    +L QLQV
Sbjct:    5 WNYDPDTLLKEPDAYVGLCNQGGTCYMNSFIQQLFHIPAFKTGLLRINAAAKTAKDATSNNSLEEKPDPNVELLFQLQV 83
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BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S4ITW2_9EUKA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ITW2_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 6.530e-7
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 1 
Query: 1909 EPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPD 2064
            + W+Y P++++K    +VGLQN GATCYMNSLLQQLY +P+F   +L L  D
Sbjct:   53 QSWNYYPSTLVKSPCGYVGLQNLGATCYMNSLLQQLYMIPNFRCGILSLPHD 104
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BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S3KWE0_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KWE0_EUPCR)

HSP 1 Score: 56.2 bits (134), Expect = 4.820e-6
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 1 
Query: 1915 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLL----GLAPD 2064
            W Y P+   ++ G++ G++N G  CYMNS+LQQLYHVPSF  +LL    G AP+
Sbjct:   14 WMYTPSGSTRK-GKYSGIRNLGCICYMNSMLQQLYHVPSFRYQLLQADDGAAPE 66
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BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S3Q4J1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q4J1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.000e-6
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1 
Query: 1915 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLL 2049
            W +DP+ V +     VGL+NQGATCYMNSLLQQL+H+P+F   +L
Sbjct: 1600 WGFDPSMVARSVTGLVGLRNQGATCYMNSLLQQLFHIPAFRKGIL 1644
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BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S4RXU1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RXU1_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.380e-5
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 1 
Query: 1915 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPLQEEDDVLLQLQV 2136
            W +DP S  K    +VG++NQGATCY+NSLLQQ + +P F   +L   P    +   +   +   D +L QLQ+
Sbjct: 1504 WSFDPLSRQKSLTGYVGMKNQGATCYLNSLLQQFFLIPPFRQGVLSCNPYLSAENTPELKEMDINDSLLYQLQL 1577
[Close]
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A446S390_TRITD (USP domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446S390_TRITD)

HSP 1 Score: 55.1 bits (131), Expect = 1.590e-5
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1 
Query: 1915 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSF 2034
            W YD     KE+G +VGL+NQGATCYMNSLLQ LYH+P F
Sbjct:    5 WTYDSK---KETG-YVGLKNQGATCYMNSLLQTLYHIPYF 40
[Close]
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S3KIB0_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KIB0_EUPCR)

HSP 1 Score: 55.1 bits (131), Expect = 1.710e-5
Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 1 
Query: 1915 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPLQEEDDVLLQLQ 2133
            W   P +  K    +VG++N G  CYM S+LQQLY +PSF   +L +        D KK+ + +ED++L QLQ
Sbjct:   27 WTISPHTDEKSQTGYVGIKNLGCICYMISMLQQLYMIPSFRENILAVE-------DPKKDEIPKEDNLLFQLQ 92
[Close]
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A1I7WZ09_HETBA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Heterorhabditis bacteriophora TaxID=37862 RepID=A0A1I7WZ09_HETBA)

HSP 1 Score: 58.9 bits (141), Expect = 2.870e-5
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 1 
Query: 1915 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVP 2028
            WDY P   L+E G +VGL+N GATCYMNS+LQQ++ +P
Sbjct:  248 WDYQPDHSLREHGNYVGLKNGGATCYMNSMLQQMFMIP 285
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU88_ECTSI4.040e-14852.30Ubiquitin domain-containing protein (Partial) (Fra... [more]
A0A6H5KTV6_9PHAE6.200e-14554.63USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3MAA4_9STRA8.890e-1046.84Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A7S4ITW2_9EUKA6.530e-753.85Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A7S3KWE0_EUPCR4.820e-650.00Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]
A0A7S3Q4J1_9STRA8.000e-657.78Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4RXU1_9STRA1.380e-539.19Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A446S390_TRITD1.590e-567.50USP domain-containing protein n=2 Tax=Triticum tur... [more]
A0A7S3KIB0_EUPCR1.710e-539.73Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]
A0A1I7WZ09_HETBA2.870e-560.53Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hete... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12665contigM-pyrifera_M_contig12665:847..4407 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score497.7
Seed ortholog evalue9.2e-138
Seed eggNOG ortholog2880.D8LU88
KEGG koko:K11840,ko:K11869
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsCOG5077@1,KOG1866@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons5
Model size2136
Cds size2136
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12665.5365.1prot_M-pyrifera_M_contig12665.5365.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12665 847..4407 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815780.6874845-CDS-M-pyrifera_M_contig12665:846..10051622815780.6874845-CDS-M-pyrifera_M_contig12665:846..1005Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 847..1005 -
1692277566.181234-CDS-M-pyrifera_M_contig12665:846..10051692277566.181234-CDS-M-pyrifera_M_contig12665:846..1005Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 847..1005 -
1622815780.7003498-CDS-M-pyrifera_M_contig12665:1390..22221622815780.7003498-CDS-M-pyrifera_M_contig12665:1390..2222Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 1391..2222 -
1692277566.1927357-CDS-M-pyrifera_M_contig12665:1390..22221692277566.1927357-CDS-M-pyrifera_M_contig12665:1390..2222Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 1391..2222 -
1622815780.7127151-CDS-M-pyrifera_M_contig12665:2676..28851622815780.7127151-CDS-M-pyrifera_M_contig12665:2676..2885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 2677..2885 -
1692277566.2002573-CDS-M-pyrifera_M_contig12665:2676..28851692277566.2002573-CDS-M-pyrifera_M_contig12665:2676..2885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 2677..2885 -
1622815780.7242308-CDS-M-pyrifera_M_contig12665:2969..38331622815780.7242308-CDS-M-pyrifera_M_contig12665:2969..3833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 2970..3833 -
1692277566.2079175-CDS-M-pyrifera_M_contig12665:2969..38331692277566.2079175-CDS-M-pyrifera_M_contig12665:2969..3833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 2970..3833 -
1622815780.7356212-CDS-M-pyrifera_M_contig12665:4335..44071622815780.7356212-CDS-M-pyrifera_M_contig12665:4335..4407Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 4336..4407 -
1692277566.2174501-CDS-M-pyrifera_M_contig12665:4335..44071692277566.2174501-CDS-M-pyrifera_M_contig12665:4335..4407Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12665 4336..4407 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12665.5365.1

>prot_M-pyrifera_M_contig12665.5365.1 ID=prot_M-pyrifera_M_contig12665.5365.1|Name=mRNA_M-pyrifera_M_contig12665.5365.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=712bp
VELESVGEEVLSDAVYLLLSLLRQSVPIKPLVSAVAHVLTLVAALTGGVA
GGARNLERHPALGSLLRALFIRVSNRSVRRAACAVLFRASYWQALGRDAS
ATAVGSGGDDEAVMGAAGVEAVVAGGAVVAATAAKSVRRAPARSNELANV
LLGSLKADLARVKTTPSARGGGGGGGHGHGPCIEGLSPVRRPRAGAARTT
DKDSGGGSIGGVGNGGGRGIGEGLVPVIVPRLHLVEVTEFVAGLVHVMLE
SARATATAGTAGAGRQLPPGGSGGDPEEVCTSAAALPLPQQQQQQPPGSR
VGATAARAPVLPVIASRDKETGLSVPGGIAPGARSVGGGGGVEGTGDSAG
CRNKESSAAAAEWLLEEAARRLAAHEFTETFKSDASDRLLVSLLHALTVA
VAGSGRRKRLAETLFSNLALASSPPPASSYSSSSKPTSSALLPRSGLIRF
LYEGCLFPPACEQEPAGEQAGSAPANGAAVAVSSGAAGSLTAGSPAATAL
PAAAAAAVAESSLGPRCKKRESRRAAFALLSALCRGEEGHLRRAFVLLGG
RDLMTRSFLESDVGDDGGESWRVATAAEASAGGHLGSGRGGGGGGGGGEG
GGGAEAVAAAAASVAATATAIAEAVALDDMSGAGSGEPWDYDPTSVLKES
GQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPL
QEEDDVLLQLQV
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mRNA from alignment at M-pyrifera_M_contig12665:847..4407-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12665.5365.1 ID=mRNA_M-pyrifera_M_contig12665.5365.1|Name=mRNA_M-pyrifera_M_contig12665.5365.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3561bp|location=Sequence derived from alignment at M-pyrifera_M_contig12665:847..4407- (Macrocystis pyrifera P11B4 male)
GTGGAGCTGGAGTCTGTCGGGGAAGAGGTTCTCTCCGATGCGGTGTACCT
CCTGCTGTCGCTCCTCCGTCAGGTATGGCCGACGGAAAAGTGGGTTGTTT
TTTGGAGGAACGGTTGAATCTGGGTGGTTGTGATTGGGTGGGAGTTGGAC
GAATGGTCGGTTGGATGAGTTGGATGCATGATTTTTTCGGAGTGGATTGA
TCGCTTGGAGGGAAGTGAGTGGTTAGGTGGTTCGTTTTTGCTTCTCTTCT
TGTGCCCCTCATCACTCTCCACGCTCCCTCCGCATCGTGCCCCACCAGTG
TGACCAGTGTGACCAGTGTGACCAGTGTGATACAGGAAGGGGTTGGGATA
TGCGAAAAGTGTGTATTTACTAAACGGAAAAAAACGTAGTGAGCGCCCAA
ATGTTGGAGGTGTGTATTAGCAGTAGGAACGGTGCTTCTCCGTCTAGAAA
GAAATGCGTGTTCAATGATCAGATGACTACGGCAGGCAACAAATGAGTAC
CCCCCCCTTTCTCTCTCCCGCCCCTCCCGCTCCTCCTCCCCCTTCCCCCC
CGCCCGGTCCCAATTTCCGCGCAGAGCGTCCCGATCAAGCCGTTGGTGTC
CGCCGTCGCGCACGTCCTCACCCTCGTCGCGGCGCTGACCGGCGGGGTGG
CCGGGGGCGCGCGGAACCTCGAGCGACACCCCGCGCTTGGGAGCCTCCTG
CGCGCCCTGTTCATCCGGGTTTCAAACCGATCTGTGCGCCGTGCCGCCTG
CGCGGTGCTGTTTCGCGCCTCCTACTGGCAGGCTCTCGGGCGCGACGCTA
GCGCGACTGCTGTGGGGAGCGGCGGGGACGACGAAGCAGTGATGGGGGCG
GCGGGGGTGGAAGCTGTGGTAGCGGGAGGGGCGGTCGTGGCAGCGACGGC
GGCCAAGTCTGTCAGGCGCGCGCCGGCAAGGAGCAACGAACTGGCTAACG
TCCTGCTGGGCTCCCTGAAGGCTGACCTGGCGAGGGTGAAGACGACGCCC
TCCGCGCGCGGTGGGGGTGGCGGCGGCGGCCACGGCCACGGCCCGTGCAT
CGAGGGCTTGTCTCCGGTGCGCCGGCCAAGAGCGGGCGCGGCGCGGACGA
CTGACAAGGACAGCGGCGGCGGCAGCATAGGCGGTGTAGGCAATGGCGGT
GGACGCGGGATCGGGGAAGGGCTCGTGCCGGTTATCGTGCCGCGCCTGCA
CCTGGTAGAGGTGACCGAGTTCGTTGCGGGGCTCGTGCACGTCATGCTGG
AGAGCGCTCGCGCTACCGCGACCGCTGGTACCGCTGGTGCGGGGCGGCAG
CTTCCGCCGGGCGGTAGTGGTGGCGACCCTGAAGAAGTGTGCACCTCGGC
TGCCGCACTTCCGCTGCCGCAACAGCAGCAACAGCAGCCTCCCGGGAGTC
GTGTCGGCGCCACCGCCGCCCGAGCGCCGGTGCTACCGGTGCTGCCGCCT
CGCCCGTTGCAGCTCGCACCGTCGGGTACCACCGCCGCCGCGGCTGCGGC
CGTCGCAGACGGCGGGAGGGAGGTCATTGCCAGCCGCGACAAGGAGACAG
GCTTGAGCGTCCCTGGCGGAATAGCTCCTGGTGCTAGGAGCGTGGGAGGA
GGTGGAGGAGTAGAAGGAACTGGGGACAGTGCGGGCTGTCGTAACAAGGA
ATCGTCCGCCGCGGCTGCTGAATGGCTCTTGGAAGAGGCGGCGAGACGCC
TGGCCGCTCACGAGTTCACCGAGACGTTCAAGTGAGAAGGGGCATGGCGC
GCGCGGCGGCGGTGGCGGCGGCAGTGCCTGGGGGCGTACCTTCGGCCGCG
TCGCACACAAACGGGTTCCGCGGCTTGACTTGGCTTTGGTTGGCTTGGAG
CGAACCATTTTGTACGCTGGTACCTGTTTTTTTAATTGCAGGCAGGCAGG
CAGGCCGCTGGCAGCGACTTCCAGGGCAATCGATGGCTTGGTCAGAACGC
CTTTTTGCTTGTTTTTTGGGGGTGCGCTGCAAACGATTGGCCGTTGGGAC
GCTCGGCCTTCGACACGATCGCTGGCGGTCCACTCGCCCGTACCCTCGCC
ACTATTACGCACCCGCCCCGGTCCTGATCTATGTCATCCTCCTTAGTTAC
TTCTACCTCCCTGCCCCACATATCTCTCTCTCTCTCGTTCGTTGTGTTCT
CTCTCTTCCCTCCCCTATTCCTCTCCTTCCCTCAGGTCGGACGCCTCGGA
CCGCCTCCTCGTGAGCCTCTTGCACGCGCTGACTGTGGCGGTGGCGGGCT
CCGGCCGCCGAAAACGCCTCGCGGAAACCCTCTTCTCGAACCTGGCTTTG
GCGTCCTCCCCCCCGCCCGCCTCCTCCTACTCCTCCTCCTCCAAACCCAC
CTCTTCCGCGCTGCTGCCGCGCTCCGGGCTGATCCGCTTCTTGTACGAGG
GGTGCCTGTTCCCTCCCGCCTGCGAGCAAGAACCGGCCGGGGAGCAGGCA
GGCTCCGCCCCGGCCAATGGTGCAGCCGTAGCTGTTTCGTCGGGGGCGGC
CGGGTCGCTAACGGCGGGGTCGCCTGCGGCGACAGCACTGCCCGCGGCTG
CGGCGGCCGCCGTGGCGGAGAGCTCCCTGGGGCCCCGGTGCAAGAAACGG
GAGTCCAGGCGGGCGGCATTCGCCCTGCTGTCGGCCCTGTGCCGGGGAGA
GGAGGGCCACCTCCGGCGCGCGTTCGTCCTGCTTGGCGGGCGCGACCTCA
TGACGAGGAGCTTTTTAGAGTCGGACGTCGGCGATGACGGCGGCGAGAGT
TGGCGGGTCGCAACAGCAGCGGAGGCTTCGGCAGGTGGGCACCTCGGGAG
TGGGCGTGGTGGTGGTGGTGGTGGTGGTGGTGGGGAGGGGGGGGGCGGCG
CGGAGGCGGTGGCGGCCGCGGCGGCGTCGGTGGCGGCGACAGCGACGGCG
ATAGCGGAGGCGGTGGCTTTGGACGACATGTCCGGCGCGGGGTCTGGAGA
GCCGTGGGACTACGACCCCACGAGCGTGCTGAAGGAGTCCGGGCAGCATG
TTGGTCTGCAGAACCAGGTTCGAAGTCGGGGGGCGGGGTGGGGGGTGGGG
GAGGTTGGCGCGTGGTGCCCTTGTGGTTTAGCTTTGCCTCTGTTATTGTC
TCCGCTGTTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTACTGGTGTTGG
TTCGTCAGGGATTGCCGATGTGGGAGGCACTCGGTCGGTTACGTGTTCGG
TTCCTTCGTTTTGAATTGGTTTTCGATGTTCGGTACTTGCAAACGGGGAC
GCGATGTGTGAGTCGACCCCCCCCCCCCCCCCCCGCTTGCCCATCTTACC
CTATTCCGCTCCGCTACACCCCGCCCCGCTCCACCCTACCCCAACCACCC
ACCCAACCACACCCAACGCCACCCGACTCCCTTCGTCCTCCGCGGTTTTC
AGGGAGCGACTTGCTACATGAACTCCTTGCTCCAGCAGCTGTACCACGTG
CCGAGCTTCTCGCTGCGGCTGCTCGGCCTGGCGCCGGATCGACGAGTGGA
CGGGGACAGAAAAAAAAATCCCCTTCAGGAAGAAGACGACGTGCTCCTAC
AACTCCAGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12665:847..4407-

>mRNA_M-pyrifera_M_contig12665.5365.1 ID=mRNA_M-pyrifera_M_contig12665.5365.1|Name=mRNA_M-pyrifera_M_contig12665.5365.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4272bp|location=Sequence derived from alignment at M-pyrifera_M_contig12665:847..4407- (Macrocystis pyrifera P11B4 male)
GTGGAGCTGGAGTCTGTCGGGGAAGAGGTTCTCTCCGATGCGGTGTACCT
CCTGCTGTCGCTCCTCCGTCAGGTGGAGCTGGAGTCTGTCGGGGAAGAGG
TTCTCTCCGATGCGGTGTACCTCCTGCTGTCGCTCCTCCGTCAGAGCGTC
CCGATCAAGCCGTTGGTGTCCGCCGTCGCGCACGTCCTCACCCTCGTCGC
GGCGCTGACCGGCGGGGTGGCCGGGGGCGCGCGGAACCTCGAGCGACACC
CCGCGCTTGGGAGCCTCCTGCGCGCCCTGTTCATCCGGGTTTCAAACCGA
TCTGTGCGCCGTGCCGCCTGCGCGGTGCTGTTTCGCGCCTCCTACTGGCA
GGCTCTCGGGCGCGACGCTAGCGCGACTGCTGTGGGGAGCGGCGGGGACG
ACGAAGCAGTGATGGGGGCGGCGGGGGTGGAAGCTGTGGTAGCGGGAGGG
GCGGTCGTGGCAGCGACGGCGGCCAAGTCTGTCAGGCGCGCGCCGGCAAG
GAGCAACGAACTGGCTAACGTCCTGCTGGGCTCCCTGAAGGCTGACCTGG
CGAGGGTGAAGACGACGCCCTCCGCGCGCGGTGGGGGTGGCGGCGGCGGC
CACGGCCACGGCCCGTGCATCGAGGGCTTGTCTCCGGTGCGCCGGCCAAG
AGCGGGCGCGGCGCGGACGACTGACAAGGACAGCGGCGGCGGCAGCATAG
GCGGTGTAGGCAATGGCGGTGGACGCGGGATCGGGGAAGGGCTCGTGCCG
GTTATCGTGCCGCGCCTGCACCTGGTAGAGGTGACCGAGTTCGTTGCGGG
GCTCGTGCACGTCATGCTGGAGAGCGCTCGCGCTACCGCGACCGCTGGTA
CCGCTGGTGCGGGGCGGCAGCTTCCGCCGGGCGGTAGTGGTGGCGACCCT
GAAGAAGTGTGCACCTCGGCTGCCGCACTTCCGCTGCCGCAACAGCAGCA
ACAGCAGCCTCCCGGGAGTCGTGTCGGCGCCACCGCCGCCCGAGCGCCGG
TGCTACCGAGCGTCCCGATCAAGCCGTTGGTGTCCGCCGTCGCGCACGTC
CTCACCCTCGTCGCGGCGCTGACCGGCGGGGTGGCCGGGGGCGCGCGGAA
CCTCGAGCGACACCCCGCGCTTGGGAGCCTCCTGCGCGCCCTGTTCATCC
GGGTTTCAAACCGATCTGTGCGCCGTGCCGCCTGCGCGGTGCTGTTTCGC
GCCTCCTACTGGCAGGCTCTCGGGCGCGACGCTAGCGCGACTGCTGTGGG
GAGCGGCGGGGACGACGAAGCAGTGATGGGGGCGGCGGGGGTGGAAGCTG
TGGTAGCGGGAGGGGCGGTCGTGGCAGCGACGGCGGCCAAGTCTGTCAGG
CGCGCGCCGGCAAGGAGCAACGAACTGGCTAACGTCCTGCTGGGCTCCCT
GAAGGCTGACCTGGCGAGGGTGAAGACGACGCCCTCCGCGCGCGGTGGGG
GTGGCGGCGGCGGCCACGGCCACGGCCCGTGCATCGAGGGCTTGTCTCCG
GTGCGCCGGCCAAGAGCGGGCGCGGCGCGGACGACTGACAAGGACAGCGG
CGGCGGCAGCATAGGCGGTGTAGGCAATGGCGGTGGACGCGGGATCGGGG
AAGGGCTCGTGCCGGTTATCGTGCCGCGCCTGCACCTGGTAGAGGTGACC
GAGTTCGTTGCGGGGCTCGTGCACGTCATGCTGGAGAGCGCTCGCGCTAC
CGCGACCGCTGGTACCGCTGGTGCGGGGCGGCAGCTTCCGCCGGGCGGTA
GTGGTGGCGACCCTGAAGAAGTGTGCACCTCGGCTGCCGCACTTCCGCTG
CCGCAACAGCAGCAACAGCAGCCTCCCGGGAGTCGTGTCGGCGCCACCGC
CGCCCGAGCGCCGGTGCTACCGGTCATTGCCAGCCGCGACAAGGAGACAG
GCTTGAGCGTCCCTGGCGGAATAGCTCCTGGTGCTAGGAGCGTGGGAGGA
GGTGGAGGAGTAGAAGGAACTGGGGACAGTGCGGGCTGTCGTAACAAGGA
ATCGTCCGCCGCGGCTGCTGAATGGCTCTTGGAAGAGGCGGCGAGACGCC
TGGCCGCTCACGAGTTCACCGAGACGTTCAAGTCATTGCCAGCCGCGACA
AGGAGACAGGCTTGAGCGTCCCTGGCGGAATAGCTCCTGGTGCTAGGAGC
GTGGGAGGAGGTGGAGGAGTAGAAGGAACTGGGGACAGTGCGGGCTGTCG
TAACAAGGAATCGTCCGCCGCGGCTGCTGAATGGCTCTTGGAAGAGGCGG
CGAGACGCCTGGCCGCTCACGAGTTCACCGAGACGTTCAAGTCGGACGCC
TCGGACCGCCTCCTCGTGAGCCTCTTGCACGCGCTGACTGTGGCGGTGGC
GGGCTCCGGCCGCCGAAAACGCCTCGCGGAAACCCTCTTCTCGAACCTGG
CTTTGGCGTCCTCCCCCCCGCCCGCCTCCTCCTACTCCTCCTCCTCCAAA
CCCACCTCTTCCGCGCTGCTGCCGCGCTCCGGGCTGATCCGCTTCTTGTA
CGAGGGGTGCCTGTTCCCTCCCGCCTGCGAGCAAGAACCGGCCGGGGAGC
AGGCAGGCTCCGCCCCGGCCAATGGTGCAGCCGTAGCTGTTTCGTCGGGG
GCGGCCGGGTCGCTAACGGCGGGGTCGCCTGCGGCGACAGCACTGCCCGC
GGCTGCGGCGGCCGCCGTGGCGGAGAGCTCCCTGGGGCCCCGGTGCAAGA
AACGGGAGTCCAGGCGGGCGGCATTCGCCCTGCTGTCGGCCCTGTGCCGG
GGAGAGGAGGGCCACCTCCGGCGCGCGTTCGTCCTGCTTGGCGGGCGCGA
CCTCATGACGAGGAGCTTTTTAGAGTCGGACGTCGGCGATGACGGCGGCG
AGAGTTGGCGGGTCGCAACAGCAGCGGAGGCTTCGGCAGGTGGGCACCTC
GGGAGTGGGCGTGGTGGTGGTGGTGGTGGTGGTGGTGGGGAGGGGGGGGG
CGGCGCGGAGGCGGTGGCGGCCGCGGCGGCGTCGGTGGCGGCGACAGCGA
CGGCGATAGCGGAGGCGGTGGCTTTGGACGACATGTCCGGCGCGGGGTCT
GGAGAGCCGTGGGACTACGACCCCACGAGCGTGCTGAAGGAGTCCGGGCA
GCATGTTGGTCTGCAGAACCAGGTCGGACGCCTCGGACCGCCTCCTCGTG
AGCCTCTTGCACGCGCTGACTGTGGCGGTGGCGGGCTCCGGCCGCCGAAA
ACGCCTCGCGGAAACCCTCTTCTCGAACCTGGCTTTGGCGTCCTCCCCCC
CGCCCGCCTCCTCCTACTCCTCCTCCTCCAAACCCACCTCTTCCGCGCTG
CTGCCGCGCTCCGGGCTGATCCGCTTCTTGTACGAGGGGTGCCTGTTCCC
TCCCGCCTGCGAGCAAGAACCGGCCGGGGAGCAGGCAGGCTCCGCCCCGG
CCAATGGTGCAGCCGTAGCTGTTTCGTCGGGGGCGGCCGGGTCGCTAACG
GCGGGGTCGCCTGCGGCGACAGCACTGCCCGCGGCTGCGGCGGCCGCCGT
GGCGGAGAGCTCCCTGGGGCCCCGGTGCAAGAAACGGGAGTCCAGGCGGG
CGGCATTCGCCCTGCTGTCGGCCCTGTGCCGGGGAGAGGAGGGCCACCTC
CGGCGCGCGTTCGTCCTGCTTGGCGGGCGCGACCTCATGACGAGGAGCTT
TTTAGAGTCGGACGTCGGCGATGACGGCGGCGAGAGTTGGCGGGTCGCAA
CAGCAGCGGAGGCTTCGGCAGGTGGGCACCTCGGGAGTGGGCGTGGTGGT
GGTGGTGGTGGTGGTGGTGGGGAGGGGGGGGGCGGCGCGGAGGCGGTGGC
GGCCGCGGCGGCGTCGGTGGCGGCGACAGCGACGGCGATAGCGGAGGCGG
TGGCTTTGGACGACATGTCCGGCGCGGGGTCTGGAGAGCCGTGGGACTAC
GACCCCACGAGCGTGCTGAAGGAGTCCGGGCAGCATGTTGGTCTGCAGAA
CCAGGGAGCGACTTGCTACATGAACTCCTTGCTCCAGCAGCTGTACCACG
TGCCGAGCTTCTCGCTGCGGCTGCTCGGCCTGGCGCCGGATCGACGAGTG
GACGGGGACAGAAAAAAAAATCCCCTTCAGGAAGAAGACGACGTGCTCCT
ACAACTCCAGGTGGGAGCGACTTGCTACATGAACTCCTTGCTCCAGCAGC
TGTACCACGTGCCGAGCTTCTCGCTGCGGCTGCTCGGCCTGGCGCCGGAT
CGACGAGTGGACGGGGACAGAAAAAAAAATCCCCTTCAGGAAGAAGACGA
CGTGCTCCTACAACTCCAGGTG
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