prot_M-pyrifera_M_contig125551.5164.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125551.5164.1
Unique Nameprot_M-pyrifera_M_contig125551.5164.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length153
Homology
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: UPI0018DA13F6 (exonuclease mut-7 homolog n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018DA13F6)

HSP 1 Score: 62.8 bits (151), Expect = 1.370e-8
Identity = 51/160 (31.87%), Postives = 78/160 (48.75%), Query Frame = 0
Query:    7 RVRLVQVATPEMIYLIDMHVMFRNPTKEEKKKLGEALALALFQPAPTVSNPLLVGFAVSGDVKAL---HPYTSPHMHKLERQRVVVDVKTHPKVTAH-----LKASGRSKKDFTS-----LAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDAW 153
            RV LVQ+AT + +YL+DM  +                  + F    + S  L +GF +SGD K L   +P     +  ++R   +VD++T  K         LK +  S+ D +      L+K+T   +G+ L K   +S+W KRPL P Q +YAALDA+
Sbjct:  406 RVALVQLATVDWVYLLDMITLMATAADR---------ITSFFLRFLSSSQVLKLGFGISGDFKTLTKPYPGLKGPVEAIQR---MVDLETLSKQILEAEPDFLKGAETSETDSSGPSVKGLSKLTLMCFGRALDKKQQLSNWEKRPLRPSQAQYAALDAY 553          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: K7E1H7_MONDO (3'-5' exonuclease domain-containing protein n=1 Tax=Monodelphis domestica TaxID=13616 RepID=K7E1H7_MONDO)

HSP 1 Score: 61.6 bits (148), Expect = 3.510e-8
Identity = 49/153 (32.03%), Postives = 84/153 (54.90%), Query Frame = 0
Query:    7 RVRLVQVATPEMIYLIDMHVMFRNPTKEEKKKLGEALALALFQPAPTVSNPLLVGFAVSGDVKALHPYTSPHMHKLERQR------VVVDVKTHPKVTAHLKASGRSKKDFTSLAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDAW 153
            RV ++Q+AT E +YL+D+ + F    KEEK+K       +LF   P+++    +G+ +SGD+ +L   T P + ++E+Q       + VD +   + ++  K +  ++K    L+ + +   GK L K   +S+W KRPL   QI YAA DA+
Sbjct:  217 RVSVLQIATKEHVYLLDL-LQFSKLDKEEKEKELCHFIWSLFS-EPSITK---LGYGMSGDLCSLST-TYPALREMEKQAQGILDLLQVDKQVRKEPSSKTKRTRHAEK---GLSLLVQNLLGKPLDKREQLSNWEKRPLREEQILYAASDAY 360          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: UPI0018D89DD9 (exonuclease mut-7 homolog isoform X1 n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D89DD9)

HSP 1 Score: 58.9 bits (141), Expect = 3.200e-7
Identity = 53/163 (32.52%), Postives = 77/163 (47.24%), Query Frame = 0
Query:    7 RVRLVQVATPEMIYLIDMHVMFRNPTKEEKKKLGEALALALFQPAPTVSNPLLVGFAVSGDVKAL---HPYTSPHMHKLERQRVVVDVKTHPKV-------------TAHLKASGRSKKDFTSLAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDAW 153
            RV LVQ+AT + +YL+DM  +        +         + F    + S  L +GF +SGD K L   +P     +  ++R   +VD+ T  K              T+   +SG S K  + L  M  CF G+ L K   +S+W KRPL P Q +YAALDA+
Sbjct:  480 RVALVQLATLDWVYLLDMITLMATAADRIR---------SFFLRFLSSSQVLKLGFGISGDFKMLTKSYPGLKGPVAAVQR---MVDLDTLSKQILKAEPDFLKRAETSETDSSGPSVKGLSELTLM--CF-GRALDKKEQLSNWEKRPLRPSQAQYAALDAY 627          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: A0A7S1ALL8_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ALL8_NOCSC)

HSP 1 Score: 58.5 bits (140), Expect = 3.910e-7
Identity = 47/147 (31.97%), Postives = 73/147 (49.66%), Query Frame = 0
Query:   10 LVQVATPEMIYLIDMHVMFRNPTKEEKKKLGEALALALFQPAPTVSNPLLVGFAVSGDVKALHPYTSPHMHKLERQRVVVDVKTHPKVTAHLKASGRSKK---DFTSLAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDAW 153
            L+Q++T E+ +++D+  +  +        L E L    F P+ T      V F  + D+  +    S    KL+R      +  +    A  ++SG S K   D  SL+K+   + G+ L K   MSDWS+RPL  GQ++YAALDAW
Sbjct:  356 LLQISTAEVAFVVDLLALGGSDA------LAEVLDGVFFHPSITK-----VSFEGTTDLSRIAKCYS----KLQRSPQATPL-VNLGQAAFDRSSGTSNKKARDSVSLSKLVNTYLGRPLDKSLQMSDWSRRPLSHGQLQYAALDAW 486          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: R1CUJ0_EMIHU (3'-5' exonuclease domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CUJ0_EMIHU)

HSP 1 Score: 56.2 bits (134), Expect = 2.510e-6
Identity = 41/117 (35.04%), Postives = 55/117 (47.01%), Query Frame = 0
Query:   36 KKKLGEALALALFQPAPTVSNPLLVGFAVSGDVKALHPYTSPHMHKLERQRVVVDVKTHPKVTAHLKASGRSKKDFTSLAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDA 152
            ++ +GE L  AL           ++GFA  GD+  L P     +H     R +VD++        L   GR      SL ++     GK L K    SDW++RPLLP QI YAALDA
Sbjct:  413 RRAVGELLRWALNGDPADDDAVAVLGFAFQGDLSVLRPICGSDLHA----RALVDLQ-------QLARQGREDSQ-PSLRRVCARTLGKALDKAEQCSDWARRPLLPAQIRYAALDA 517          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: R1FEZ3_EMIHU (3'-5' exonuclease domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FEZ3_EMIHU)

HSP 1 Score: 55.8 bits (133), Expect = 3.460e-6
Identity = 41/117 (35.04%), Postives = 55/117 (47.01%), Query Frame = 0
Query:   36 KKKLGEALALALFQPAPTVSNPLLVGFAVSGDVKALHPYTSPHMHKLERQRVVVDVKTHPKVTAHLKASGRSKKDFTSLAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDA 152
            ++ +GE L  AL           ++GFA  GD+  L P     +H     R +VD++        L   GR      SL ++     GK L K    SDW++RPLLP QI YAALDA
Sbjct:  388 RRAVGELLRWALNGDPADDDAVAVLGFAFQGDLSVLRPICGGDLHA----RALVDLQ-------QLARQGREDSQ-PSLRRVCARTLGKALDKAEQCSDWARRPLLPAQIRYAALDA 492          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: G3VE29_SARHA (3'-5' exonuclease domain-containing protein n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3VE29_SARHA)

HSP 1 Score: 55.8 bits (133), Expect = 3.610e-6
Identity = 49/155 (31.61%), Postives = 82/155 (52.90%), Query Frame = 0
Query:    7 RVRLVQVATPEMIYLIDMHVMFRNPTKEEKKKLGEALALALFQPAPTVSNPLLV--GFAVSGDVKALHPYTSPHMHKLERQR------VVVDVKTHPKVTAHLKASGRSKKDFTSLAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDAW 153
            RV ++Q+AT E +YL+D+ + F    +EEK+K        LF      S+P ++  G+ +SGD+ +L   T P + ++E+Q       + VD +     +   K+  +++K    L+ + +   GK L K   +S+W KRPL   QI YAA DA+
Sbjct:  326 RVSVLQIATKEHVYLLDL-LQFSKLDQEEKEKELCHFIWKLF------SDPSIIKLGYGMSGDLCSLST-TYPALREMEKQAQGILDLLQVDKQVRMGPSFITKSPRQAEK---GLSLLVQNLLGKPLDKTEQLSNWEKRPLREEQILYAASDAY 469          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: UPI0004433654 (exonuclease mut-7 homolog n=2 Tax=Didelphinae TaxID=126287 RepID=UPI0004433654)

HSP 1 Score: 53.9 bits (128), Expect = 1.720e-5
Identity = 52/167 (31.14%), Postives = 83/167 (49.70%), Query Frame = 0
Query:    7 RVRLVQVATPEMIYLIDMHVMFRNPTKEEKKKLGEALALALFQPAPTVSNPLLVGFAVSGDVKALHPYTSPHMHKLERQ-RVVVDV--------------KTHPKVTAHLKASGRSKKDFT-----SLAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDAW 153
            RV ++Q+AT E +YL+D+ + F    KEEK+K       +LF   P+++    +G+ +SGD+ +L   T P + ++E+Q + ++D+              K H      L     SK   T      L+ + +   GK L K   +S+W KRPL   QI YAA DA+
Sbjct:  494 RVSVLQIATKEHVYLLDL-LQFSKLDKEEKEKELCHFIWSLFS-EPSITK---LGYGMSGDLCSLST-TYPALREMEKQAQGILDLLQVDKQLQKNSGLWKKHHIPVDSLCQEPSSKTKRTRHAEKGLSLLVQNLLGKPLDKREQLSNWEKRPLREEQILYAASDAY 654          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: UPI001F049C4B (exonuclease mut-7 homolog isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F049C4B)

HSP 1 Score: 53.9 bits (128), Expect = 1.770e-5
Identity = 43/159 (27.04%), Postives = 75/159 (47.17%), Query Frame = 0
Query:    7 RVRLVQVATPEMIYLIDMHVMFRNPTKEEKKKLGEALALALFQPAPTVSNPLLVGFAVSGDVKALHPYTSPHMHK-LERQRVVVDVKTHPKVTAHLKASGRSKKDFTS------------LAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDA 152
            R+ +VQ++  + ++++D+  +     +      G A+           +N L +G+ V  D KAL   T P + K +++ +  VD+ T  +    + A  R   + T             L+ + +   G  L K + +SDW +RPLLP Q+EYAALDA
Sbjct:  731 RLSIVQLSLRDRVFILDVIAIANEVPRNTILSFGNAVFAN--------ANVLKLGYGVESDFKALIA-TLPILEKSIKKMKSFVDLCTFSRKLFQIPAVRRRVDETTKSLTFFGHLSEKGLSLLVQQCLGSPLDKTYQLSDWEQRPLLPKQVEYAALDA 880          
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Match: A0A7S0WGV7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WGV7_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 2.020e-5
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:  114 LAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAALDAW 153
            L+ +T    GK L K   MSDWS+RPLLP QI YAALDAW
Sbjct:  359 LSTLTAVVLGKPLDKAMRMSDWSRRPLLPTQINYAALDAW 398          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125551.5164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
UPI0018DA13F61.370e-831.88exonuclease mut-7 homolog n=1 Tax=Patiria miniata ... [more]
K7E1H7_MONDO3.510e-832.033'-5' exonuclease domain-containing protein n=1 Ta... [more]
UPI0018D89DD93.200e-732.52exonuclease mut-7 homolog isoform X1 n=3 Tax=Patir... [more]
A0A7S1ALL8_NOCSC3.910e-731.97Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
R1CUJ0_EMIHU2.510e-635.043'-5' exonuclease domain-containing protein n=1 Ta... [more]
R1FEZ3_EMIHU3.460e-635.043'-5' exonuclease domain-containing protein n=1 Ta... [more]
G3VE29_SARHA3.610e-631.613'-5' exonuclease domain-containing protein n=1 Ta... [more]
UPI00044336541.720e-531.14exonuclease mut-7 homolog n=2 Tax=Didelphinae TaxI... [more]
UPI001F049C4B1.770e-527.04exonuclease mut-7 homolog isoform X1 n=2 Tax=Xenia... [more]
A0A7S0WGV7_9CHLO2.020e-562.50Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..153
e-value: 2.2E-20
score: 74.7
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 5..153
e-value: 4.2E-8
score: 33.1
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 3..152
NoneNo IPR availablePANTHERPTHR13620:SF42EXONUCLEASE MUT-7 HOMOLOGcoord: 3..152
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 6..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125551contigM-pyrifera_M_contig125551:3..461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125551.5164.1mRNA_M-pyrifera_M_contig125551.5164.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125551 3..461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125551.5164.1 ID=prot_M-pyrifera_M_contig125551.5164.1|Name=mRNA_M-pyrifera_M_contig125551.5164.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp
EGDEEDRVRLVQVATPEMIYLIDMHVMFRNPTKEEKKKLGEALALALFQP
APTVSNPLLVGFAVSGDVKALHPYTSPHMHKLERQRVVVDVKTHPKVTAH
LKASGRSKKDFTSLAKMTECFYGKGLGKLWTMSDWSKRPLLPGQIEYAAL
DAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf