mRNA_M-pyrifera_M_contig125106.5090.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A0F9W592_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9W592_9ZZZZ) HSP 1 Score: 84.7 bits (208), Expect = 8.830e-19 Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 1
Query: 1 WQPGWEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRV 168
W PGW+A V +++DAD FT +DV NLL+RVG QVGIGEGR++SKKS G GWG F++
Sbjct: 163 WSPGWQAKVRVEYDADQFTAEDVGNLLLRVGLQVGIGEGRNDSKKSTGLGWGFFKI 218
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: X0U318_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0U318_9ZZZZ) HSP 1 Score: 80.5 bits (197), Expect = 3.210e-17 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 WQPGWEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRVKEQ 177
W+ GWEA V I+FD D FTL DVANL++R G QVG+GEGR +S+KS G GWG F E+
Sbjct: 151 WKTGWEAIVRIRFDGDQFTLDDVANLMLRAGLQVGVGEGRPDSRKSCGLGWGLFNFVEE 209
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A3C1F2N4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Omnitrophica bacterium TaxID=2035772 RepID=A0A3C1F2N4_9BACT) HSP 1 Score: 78.6 bits (192), Expect = 1.740e-16 Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 13 WEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRVK 171
WEA++ I+FD D F DVANLL RVGEQVGIGEGR +SK S G GWGTF +K
Sbjct: 157 WEANIRIRFDGDQFNFTDVANLLQRVGEQVGIGEGRPDSKNSAGMGWGTFELK 209
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A6M3XT74_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6M3XT74_9ZZZZ) HSP 1 Score: 77.4 bits (189), Expect = 5.390e-16 Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 1
Query: 1 WQPGWEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRV 168
W+ GWEA V +++D D F+L+DV NL++R+G QVG+GEGR +SKKS G GWG F +
Sbjct: 158 WKSGWEAIVRVRYDEDQFSLEDVTNLMMRIGLQVGVGEGRPDSKKSCGMGWGMFEL 213
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A3R8U8A8_STEMA (Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia TaxID=40324 RepID=A0A3R8U8A8_STEMA) HSP 1 Score: 77.0 bits (188), Expect = 7.060e-16 Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 13 WEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRVKEQ 177
W ADV I++DAD F+L DV+NL+ RVG QVG+GEGR +SK S G GWGTFR+ +
Sbjct: 153 WAADVRIRYDADQFSLTDVSNLISRVGSQVGVGEGRPDSKNSAGMGWGTFRLANE 207
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A151FZ83_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium liaoningense TaxID=43992 RepID=A0A151FZ83_9BRAD) HSP 1 Score: 73.9 bits (180), Expect = 2.040e-14 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1 WQPGWEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRV 168
W GW+A + +++DAD F+ DV NLL RVG QVGIGEGR++SK S G GWG F+V
Sbjct: 189 WLEGWQAKLNMRWDADQFSADDVFNLLSRVGMQVGIGEGRYDSKDSAGLGWGCFKV 244
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A3S4AZ56_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A3S4AZ56_9HYPH) HSP 1 Score: 72.0 bits (175), Expect = 5.330e-14 Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 1 WQPGWE---ADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRVK 171
W+P WE A V +++DA F+ QDV NLL RVG QVGIGEGR +SK S G GWG F V+
Sbjct: 146 WRPMWEQWAATVRVRWDASQFSAQDVVNLLARVGAQVGIGEGRPDSKNSAGMGWGLFEVQ 205
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A7C3T8F7_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3T8F7_9BACT) HSP 1 Score: 70.5 bits (171), Expect = 2.010e-13 Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 13 WEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRV 168
W V + FD D F+ DV NLL+RVGEQVGIGEGR +S+ S G GWG FR+
Sbjct: 132 WACTVNVVFDGDQFSFDDVTNLLLRVGEQVGIGEGRPDSRNSAGLGWGLFRI 183
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A2M7ATA4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Shapirobacteria bacterium CG06_land_8_20_14_3_00_40_12 TaxID=1974881 RepID=A0A2M7ATA4_9BACT) HSP 1 Score: 68.9 bits (167), Expect = 8.600e-13 Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 WQPGWEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRV 168
W GWEA++ I+ DADM + D+ NLL R G QVGI EGR +SK S G GWGTF +
Sbjct: 152 WDAGWEANLLIQHDADMLSSADITNLLRRAGLQVGICEGRPDSKDSVGMGWGTFDI 207
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Match: A0A3N5F4G3_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A3N5F4G3_9BACT) HSP 1 Score: 67.4 bits (163), Expect = 1.750e-12 Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 13 WEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGWGTFRV 168
W ADV I++D D FT++D++NLL RVG QVG+ EGR +S S G GWG F V
Sbjct: 111 WSADVKIRWDEDQFTVEDISNLLARVGAQVGLCEGRPDSPNSAGMGWGLFEV 162 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125106.5090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125106.5090.1 >prot_M-pyrifera_M_contig125106.5090.1 ID=prot_M-pyrifera_M_contig125106.5090.1|Name=mRNA_M-pyrifera_M_contig125106.5090.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=61bp WQPGWEADVTIKFDADMFTLQDVANLLVRVGEQVGIGEGRHNSKKSYGCGback to top mRNA from alignment at M-pyrifera_M_contig125106:332..514- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125106.5090.1 ID=mRNA_M-pyrifera_M_contig125106.5090.1|Name=mRNA_M-pyrifera_M_contig125106.5090.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=183bp|location=Sequence derived from alignment at M-pyrifera_M_contig125106:332..514- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125106:332..514- >mRNA_M-pyrifera_M_contig125106.5090.1 ID=mRNA_M-pyrifera_M_contig125106.5090.1|Name=mRNA_M-pyrifera_M_contig125106.5090.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=366bp|location=Sequence derived from alignment at M-pyrifera_M_contig125106:332..514- (Macrocystis pyrifera P11B4 male)back to top |