mRNA_M-pyrifera_M_contig125001.5074.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: A0A3M2GYT4_ACTSX (1-deoxy-D-xylulose-5-phosphate synthase (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GYT4_ACTSX) HSP 1 Score: 291 bits (744), Expect = 1.730e-96 Identity = 138/166 (83.13%), Postives = 151/166 (90.96%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADA 498
YAPAEND +KNMHD G KP SYTAAF+E+++KLGE HPE+V ITAAMPDSTGLLPF ERFPDRCFDVGIAEQHAVTAA GMAMG LRPV AVY+TFLTRA DQVNLD GLHGQPV+FCLDRAG+TGDDGPSHHG+LD+VLL+KVP MT+FAPSSYQELQQML DA
Sbjct: 2 YAPAENDVVKNMHDTGSIKPGSYTAAFSETIVKLGETHPELVTITAAMPDSTGLLPFRERFPDRCFDVGIAEQHAVTAATGMAMGGLRPVVAVYSTFLTRAFDQVNLDCGLHGQPVVFCLDRAGVTGDDGPSHHGLLDMVLLTKVPGMTLFAPSSYQELQQMLVDA 167
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: A0A6I3A4E8_9ACTN (1-deoxy-D-xylulose-5-phosphate synthase n=4 Tax=root TaxID=1 RepID=A0A6I3A4E8_9ACTN) HSP 1 Score: 294 bits (752), Expect = 3.760e-94 Identity = 145/170 (85.29%), Postives = 154/170 (90.59%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADAHTLD 510
YAPAEND IKNMHDL KP SYTAAFTE+L+K+GEEHP +VAITAAMPDSTGLLPF +RFPDRCFDVGIAEQHAVTAAAGMAMG LRPV A+YATFLTRA DQVNLDVGLHGQPV+F LDRAGITGDDG SHHG+LD+VLLSKVP MTIFAPSSYQEL MLADA TLD
Sbjct: 286 YAPAENDSIKNMHDLSELKPGSYTAAFTEALVKMGEEHPNLVAITAAMPDSTGLLPFQDRFPDRCFDVGIAEQHAVTAAAGMAMGGLRPVVALYATFLTRAFDQVNLDVGLHGQPVVFALDRAGITGDDGASHHGLLDMVLLSKVPGMTIFAPSSYQELHVMLADALTLD 455
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: A0A2E8LFL2_9ACTN (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LFL2_9ACTN) HSP 1 Score: 286 bits (731), Expect = 4.590e-91 Identity = 139/166 (83.73%), Postives = 149/166 (89.76%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADA 498
Y PAE DPIK+MHD G KP SYT AFTE+L+K E PE+VAITAAMPDSTGLLPF ERFPDRCFDVGIAEQHAVT+AAGMAMG LRPV AVY+TFLTRA+DQVNLDV LHGQPV+FCLDRAGITGDDGPSHHG+LDLVLLSKVP MT+FAPSSYQELQQML DA
Sbjct: 284 YEPAERDPIKHMHDTSGIKPGSYTEAFTEALVKAAESRPELVAITAAMPDSTGLLPFRERFPDRCFDVGIAEQHAVTSAAGMAMGGLRPVVAVYSTFLTRAIDQVNLDVALHGQPVLFCLDRAGITGDDGPSHHGLLDLVLLSKVPGMTVFAPSSYQELQQMLEDA 449
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: A0A6B1H7K0_9ACTN (1-deoxy-D-xylulose-5-phosphate synthase n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1H7K0_9ACTN) HSP 1 Score: 285 bits (730), Expect = 8.470e-91 Identity = 135/166 (81.33%), Postives = 151/166 (90.96%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADA 498
YAPAENDP+KNMHD+ KP SYT AFTE++IK E PE+VAITAAMPDSTGLLPF ERFP+RCFDVGIAEQHAVTAAAGMAMG LRPV A+Y+TFLTRA+DQVNLDVGLHGQPV+FCLDRAGITGDDGPSHHG+LD+VLL+K+P MT+ APSSYQE+QQML DA
Sbjct: 288 YAPAENDPVKNMHDMSKAKPGSYTEAFTEAMIKEAEARPEMVAITAAMPDSTGLLPFAERFPERCFDVGIAEQHAVTAAAGMAMGGLRPVVAIYSTFLTRAIDQVNLDVGLHGQPVVFCLDRAGITGDDGPSHHGVLDMVLLTKIPGMTVLAPSSYQEIQQMLHDA 453
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: UPI001E2CBD68 (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E2CBD68) HSP 1 Score: 285 bits (730), Expect = 9.560e-91 Identity = 137/166 (82.53%), Postives = 150/166 (90.36%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADA 498
Y PAENDPIK MHD+G PKP SYTAAFTE+LI E HPE+VAITAAMPDSTGLLPF +RFPDRCFDVGIAEQHAVT+AAGMAMG LRPV A+Y+TFLTRA+DQVNLDVGLH QPV+FCLDRAGITGDDGPSHHGILD+VLL+KVP MT+FAP+SYQEL QM DA
Sbjct: 285 YGPAENDPIKRMHDIGAPKPGSYTAAFTEALITEAEIHPEIVAITAAMPDSTGLLPFADRFPDRCFDVGIAEQHAVTSAAGMAMGGLRPVVALYSTFLTRAIDQVNLDVGLHRQPVVFCLDRAGITGDDGPSHHGILDMVLLTKVPGMTVFAPASYQELGQMFHDA 450
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: UPI001AA059F9 (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA059F9) HSP 1 Score: 284 bits (726), Expect = 3.780e-90 Identity = 136/166 (81.93%), Postives = 151/166 (90.96%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADA 498
YAPAENDPIK +HD+GG KP SYTAAFTE+L+K EEHPE+VAITAAMPDSTGLLPF ER+PDR FDVGIAEQHAVTAAAGMAMG LRPV A+Y+TFLTRA DQ+NLDVGLH QPV+FC+DRAGITGDDG SHHG+LD+VLL+KVP MT+FAPSSYQELQ ML DA
Sbjct: 286 YAPAENDPIKRLHDIGGAKPGSYTAAFTEALLKEAEEHPEIVAITAAMPDSTGLLPFAERYPDRFFDVGIAEQHAVTAAAGMAMGGLRPVVAIYSTFLTRAFDQINLDVGLHHQPVVFCIDRAGITGDDGASHHGLLDMVLLTKVPGMTMFAPSSYQELQVMLHDA 451
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: A0A3D5K5F5_9ACTN (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K5F5_9ACTN) HSP 1 Score: 283 bits (725), Expect = 4.840e-90 Identity = 136/165 (82.42%), Postives = 147/165 (89.09%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLAD 495
+APAE DPIK+MHD GG KP SYT AFTESL+K E HPEVVAITAAMPDSTGLLPF +RFPDRCFDVGIAEQHAVTAAAGMAMG LRPV A+YATFL+RA DQ NLDVGLHG PV+FCLDRAGITGDDGPSHHG+LD+VLLS+VP MT+ APSSYQELQQM D
Sbjct: 289 HAPAEQDPIKHMHDTGGVKPGSYTEAFTESLLKAAESHPEVVAITAAMPDSTGLLPFRDRFPDRCFDVGIAEQHAVTAAAGMAMGGLRPVIALYATFLSRAFDQTNLDVGLHGLPVVFCLDRAGITGDDGPSHHGVLDMVLLSRVPGMTVLAPSSYQELQQMFED 453
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: A0A7Y2DQR5_9ACTN (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DQR5_9ACTN) HSP 1 Score: 281 bits (718), Expect = 4.540e-89 Identity = 136/170 (80.00%), Postives = 153/170 (90.00%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADAHTLD 510
YAPAENDPIKNMHD KP SYT AF++++++LGE H +VVAITAAMPDSTGLLPF++RFPDR FDVGIAEQHAVT AAG+AMG LRP+ AVY+TFLTRA+DQVNLDVGLH QPVIFCLDRAGITGDDGPSHHG+LDLVL+SKVPNMTI PSSYQEL+QML DA+ LD
Sbjct: 289 YAPAENDPIKNMHDTSELKPGSYTDAFSKAVVELGETHDDVVAITAAMPDSTGLLPFLDRFPDRTFDVGIAEQHAVTFAAGLAMGGLRPIVAVYSTFLTRAIDQVNLDVGLHEQPVIFCLDRAGITGDDGPSHHGVLDLVLMSKVPNMTILCPSSYQELRQMLFDAYDLD 458
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: A0A2E7X8K3_9ACTN (1-deoxy-D-xylulose-5-phosphate synthase n=4 Tax=root TaxID=1 RepID=A0A2E7X8K3_9ACTN) HSP 1 Score: 280 bits (717), Expect = 5.670e-89 Identity = 137/166 (82.53%), Postives = 148/166 (89.16%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADA 498
Y PAE DPIK+MHD G KP SYT AFTE+L+K+ E P +VAITAAMPDSTGLLPF ERFPDRCFDVGIAEQHAVT+AAGMAMG LRPV AVY+T LTRA+DQVNLDV LHGQPV+FCLDRAGITGDDGPSHHG+LDLVLLSKVP MTIFAPSSYQE+QQML DA
Sbjct: 284 YEPAELDPIKHMHDTSGIKPGSYTEAFTEALVKVAESRPXLVAITAAMPDSTGLLPFRERFPDRCFDVGIAEQHAVTSAAGMAMGGLRPVLAVYSTXLTRAIDQVNLDVALHGQPVVFCLDRAGITGDDGPSHHGLLDLVLLSKVPGMTIFAPSSYQEVQQMLEDA 449
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Match: A0A7C7W473_9ACTN (1-deoxy-D-xylulose-5-phosphate synthase n=6 Tax=root TaxID=1 RepID=A0A7C7W473_9ACTN) HSP 1 Score: 280 bits (717), Expect = 6.250e-89 Identity = 136/166 (81.93%), Postives = 147/166 (88.55%), Query Frame = 1
Query: 1 YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDSTGLLPFMERFPDRCFDVGIAEQHAVTAAAGMAMGALRPVFAVYATFLTRAMDQVNLDVGLHGQPVIFCLDRAGITGDDGPSHHGILDLVLLSKVPNMTIFAPSSYQELQQMLADA 498
+APAE DPIK+MHD GG K SYTAAFTES++K E PEVVAITAAMPDSTGLLPF +RFPDRCFDVGIAEQHAVTAAAGMAMG LRPV A+YATFL+RA DQ NLDVGLHG PV+FCLDRAGITGDDGPSHHG+LD+VLLSK+P MTI APSSYQELQQM DA
Sbjct: 284 HAPAEQDPIKHMHDTGGVKVGSYTAAFTESILKAAESRPEVVAITAAMPDSTGLLPFRDRFPDRCFDVGIAEQHAVTAAAGMAMGGLRPVVALYATFLSRAFDQANLDVGLHGLPVVFCLDRAGITGDDGPSHHGVLDMVLLSKIPGMTILAPSSYQELQQMFEDA 449 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125001.5074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125001.5074.1 >prot_M-pyrifera_M_contig125001.5074.1 ID=prot_M-pyrifera_M_contig125001.5074.1|Name=mRNA_M-pyrifera_M_contig125001.5074.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp YAPAENDPIKNMHDLGGPKPESYTAAFTESLIKLGEEHPEVVAITAAMPDback to top mRNA from alignment at M-pyrifera_M_contig125001:6..515- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125001.5074.1 ID=mRNA_M-pyrifera_M_contig125001.5074.1|Name=mRNA_M-pyrifera_M_contig125001.5074.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig125001:6..515- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125001:6..515- >mRNA_M-pyrifera_M_contig125001.5074.1 ID=mRNA_M-pyrifera_M_contig125001.5074.1|Name=mRNA_M-pyrifera_M_contig125001.5074.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig125001:6..515- (Macrocystis pyrifera P11B4 male)back to top |