prot_M-pyrifera_M_contig124677.5022.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124677.5022.1
Unique Nameprot_M-pyrifera_M_contig124677.5022.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length172
Homology
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A3D5DBN7_9GAMM (DNA topoisomerase 4 subunit A n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBN7_9GAMM)

HSP 1 Score: 285 bits (730), Expect = 1.580e-89
Identity = 140/172 (81.40%), Postives = 154/172 (89.53%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            KL  Y+++LL+ELDQGTT+W PNFDGT+DEP LLP+RLPNLLLNGTTGIAVGMATDIPPHNL EVA ACVHL+E PKATVADLCA I+GPD+PT AEIITP  EIR+AYETGHGS+KMRA YEIEK  +AI ALPYQTSG+KIIEQIA QMQAKKL  LDDIRDESDHETPT
Sbjct:  126 KLTAYSEILLSELDQGTTEWAPNFDGTIDEPLLLPSRLPNLLLNGTTGIAVGMATDIPPHNLGEVATACVHLLEKPKATVADLCAFIHGPDYPTSAEIITPQAEIRKAYETGHGSIKMRAGYEIEKGVVAINALPYQTSGSKIIEQIAHQMQAKKLPMLDDIRDESDHETPT 297          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A523NV03_9PROT (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NV03_9PROT)

HSP 1 Score: 285 bits (728), Expect = 2.930e-89
Identity = 139/172 (80.81%), Postives = 154/172 (89.53%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            KL  Y++LLL EL QGT DW PNFDGTL+EP LLPARLPN+LLNGTTGIAVGMATDIPPHNLREVAAAC+HL++NPKATVA LC H+ GPDFP+ AEI+TP  EIRQAYETGHGSVK+RAR+EIEK +I IT LPYQTSG+KIIEQIAQQM+AKKL  LDDIRDESDHETPT
Sbjct:  126 KLTAYSELLLGELAQGTADWAPNFDGTLEEPVLLPARLPNVLLNGTTGIAVGMATDIPPHNLREVAAACIHLLQNPKATVAQLCEHVLGPDFPSGAEIVTPPHEIRQAYETGHGSVKLRARFEIEKGSIVITTLPYQTSGSKIIEQIAQQMRAKKLPMLDDIRDESDHETPT 297          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A7C5XQJ0_9GAMM (DNA topoisomerase 4 subunit A n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XQJ0_9GAMM)

HSP 1 Score: 270 bits (690), Expect = 1.770e-83
Identity = 131/172 (76.16%), Postives = 151/172 (87.79%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            +LAPYA++LLAELDQGT DW PNFDGTL EP +LPARLPN+LLNG TGIAVGMATDIPPHNLREVAAACVHL+E+PKATVA+LC HI GPDFPTEAEIITP +EI + YETG GS++MRARYE E  A+ +TALPYQ SG +++EQIA QMQAKKL  + D+RDESDHE+PT
Sbjct:  142 RLAPYAEVLLAELDQGTVDWVPNFDGTLREPAVLPARLPNVLLNGATGIAVGMATDIPPHNLREVAAACVHLLEHPKATVAELCGHILGPDFPTEAEIITPREEIVRIYETGTGSIRMRARYEREDGAVVVTALPYQVSGARVLEQIAAQMQAKKLPLVADLRDESDHESPT 313          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A7C1YFY4_9GAMM (DNA topoisomerase 4 subunit A n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1YFY4_9GAMM)

HSP 1 Score: 267 bits (683), Expect = 1.450e-82
Identity = 130/172 (75.58%), Postives = 151/172 (87.79%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            +LAPYA+LLL+EL QGT DW PNFDGTL+EP LLPARLPNLLLNGTTGIAVGMATDIPPHN+REVAAA V L+E PKATVA+LC H+ GPDFPTEAEIITP +E+ +AYETG+GSV+MRAR+E+E+  I ITALPYQ  G K++EQIAQQM AKKL  ++D+RDESDHE PT
Sbjct:  130 RLAPYAELLLSELGQGTVDWVPNFDGTLEEPPLLPARLPNLLLNGTTGIAVGMATDIPPHNMREVAAAAVRLLEQPKATVAELCEHLLGPDFPTEAEIITPREELIKAYETGNGSVRMRARWEMEQGDIVITALPYQVPGGKVLEQIAQQMNAKKLPMVEDLRDESDHENPT 301          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A7C1GY99_9GAMM (DNA topoisomerase 4 subunit A n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1GY99_9GAMM)

HSP 1 Score: 267 bits (682), Expect = 2.120e-82
Identity = 126/172 (73.26%), Postives = 153/172 (88.95%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            +LAPYA++LL EL QGT DW PNFDGTLDEP +LPARLPN+LLNG+TGIAVGM+TDIPPHNLREVAAAC+HL+++PKATVA+LC HI GPDFPT+AE+ITP  +I++ YETG+GS++MRARYE E+  I +TALPYQ SG K++EQIAQQMQAKKL  ++D+RDESDHE PT
Sbjct:  131 RLAPYAEVLLRELGQGTVDWVPNFDGTLDEPAVLPARLPNVLLNGSTGIAVGMSTDIPPHNLREVAAACIHLLDSPKATVAELCEHIQGPDFPTDAELITPRADIQRMYETGNGSLRMRARYEREEGDIVVTALPYQVSGAKVLEQIAQQMQAKKLPMVEDLRDESDHEHPT 302          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: B8GTV5_THISH (DNA topoisomerase 4 subunit A n=4 Tax=Thioalkalivibrio TaxID=106633 RepID=B8GTV5_THISH)

HSP 1 Score: 263 bits (671), Expect = 8.600e-81
Identity = 126/172 (73.26%), Postives = 150/172 (87.21%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            +L+PYA LLL+EL QGT DW PNFDGTL+EP++LPARLPN+LLNG TGIAVGMATDIPPHNLREVA+ACVHL++NP+A+VADLC HI GPDFPTEAEIITP  E+R+ YE+G+G ++MRARYE E   I ITALPYQ SG+K++EQIA QM AKKL  ++D+RDESDHE PT
Sbjct:  130 RLSPYAQLLLSELGQGTVDWVPNFDGTLEEPKVLPARLPNVLLNGGTGIAVGMATDIPPHNLREVASACVHLLDNPRASVADLCEHIQGPDFPTEAEIITPRAELRKMYESGNGGLRMRARYEREGTDIIITALPYQVSGSKVLEQIAAQMNAKKLPMVEDLRDESDHEHPT 301          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A3M1UML5_9GAMM (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1UML5_9GAMM)

HSP 1 Score: 262 bits (669), Expect = 1.480e-80
Identity = 126/172 (73.26%), Postives = 148/172 (86.05%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            +L+ Y +LLLAEL QGT DW PNFDGTL+EP +LPARLPN+LLNGTTGIAVGMATDIPPHNLREVAAACV L+E+PKA VA LC HI GPDFPT AEI+TP  E+R+ YETG GS++ RARYEIE+  I ITALPYQ SG++++EQIAQQMQA+KL  ++D+RDESDHE PT
Sbjct:  121 RLSRYTELLLAELGQGTVDWVPNFDGTLEEPAVLPARLPNVLLNGTTGIAVGMATDIPPHNLREVAAACVRLLEDPKADVAALCEHIQGPDFPTAAEIVTPRAELRRIYETGQGSIRARARYEIEQGDIVITALPYQVSGSRVLEQIAQQMQARKLPMIEDLRDESDHENPT 292          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A2D7WD14_9GAMM (DNA topoisomerase 4 subunit A n=2 Tax=Spongiibacter TaxID=630749 RepID=A0A2D7WD14_9GAMM)

HSP 1 Score: 261 bits (668), Expect = 2.550e-80
Identity = 123/172 (71.51%), Postives = 150/172 (87.21%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            KL  YA+++L+EL QGT DW PNFDG LDEP +LPAR+PN+LLNGTTGIAVGMATDIPPHNLREV +AC+HL++ PKATVA+LC H+ GPDFPT+AE+ITP+DEIR+ YETG GS++MRA ++ E D I ITALP+QTSG+K++EQIAQQMQAKKL  + D+RDESDHE PT
Sbjct:  131 KLTRYAEVMLSELGQGTVDWVPNFDGALDEPAMLPARVPNILLNGTTGIAVGMATDIPPHNLREVVSACIHLLDAPKATVAELCEHVKGPDFPTDAELITPADEIRKIYETGRGSLRMRAVWQEEHDDIVITALPHQTSGSKVLEQIAQQMQAKKLPMVVDLRDESDHENPT 302          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A6N1DN43_9GAMM (DNA topoisomerase 4 subunit A n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DN43_9GAMM)

HSP 1 Score: 261 bits (666), Expect = 4.490e-80
Identity = 125/172 (72.67%), Postives = 149/172 (86.63%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            +LA + DLLL+EL QGT DW PNFDGTL+EP +LPAR+P++LLNGTTGIAVGMATDIPPHNLREV AACVHL+ENPKATVA+LCAHI GPD+PTEAE+ITP  ++ + YETG GS++MRARYE E   I ITALP+QTSG +++EQIAQQM AKKL  ++D+RDESDHE PT
Sbjct:  130 RLASFTDLLLSELGQGTVDWIPNFDGTLEEPAMLPARVPHVLLNGTTGIAVGMATDIPPHNLREVVAACVHLLENPKATVAELCAHIQGPDYPTEAEVITPRADLIRMYETGTGSIRMRARYEREDGDIIITALPHQTSGARVLEQIAQQMNAKKLPLVEDLRDESDHENPT 301          
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Match: A0A316FU70_9GAMM (DNA topoisomerase 4 subunit A n=1 Tax=Pleionea mediterranea TaxID=523701 RepID=A0A316FU70_9GAMM)

HSP 1 Score: 261 bits (666), Expect = 4.570e-80
Identity = 125/172 (72.67%), Postives = 149/172 (86.63%), Query Frame = 0
Query:    1 KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIAVGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIITPSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQMQAKKLATLDDIRDESDHETPT 172
            KL+ Y+++LL+EL  GT DW PNFDGT++EP++LPARLPNLLLNGTTGIAVGMATDIPPHNLREVA ACVHL++NPKA+VADL  +I GPD+PT+AE+ITP D++ + YETG GSVKMRARY  E   I ITALP+Q SGNKI+EQ+AQQMQAKKL  + D+RDESDHETPT
Sbjct:  127 KLSKYSEVLLSELGHGTVDWIPNFDGTMNEPKILPARLPNLLLNGTTGIAVGMATDIPPHNLREVADACVHLLDNPKASVADLHQYIKGPDYPTDAEVITPKDDLLKIYETGRGSVKMRARYHTEDGEIVITALPHQVSGNKIMEQVAQQMQAKKLPMVSDLRDESDHETPT 298          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124677.5022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DBN7_9GAMM1.580e-8981.40DNA topoisomerase 4 subunit A n=1 Tax=Gammaproteob... [more]
A0A523NV03_9PROT2.930e-8980.81DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A7C5XQJ0_9GAMM1.770e-8376.16DNA topoisomerase 4 subunit A n=1 Tax=Chromatiales... [more]
A0A7C1YFY4_9GAMM1.450e-8275.58DNA topoisomerase 4 subunit A n=1 Tax=Thiotrichale... [more]
A0A7C1GY99_9GAMM2.120e-8273.26DNA topoisomerase 4 subunit A n=1 Tax=Thioalkalivi... [more]
B8GTV5_THISH8.600e-8173.26DNA topoisomerase 4 subunit A n=4 Tax=Thioalkalivi... [more]
A0A3M1UML5_9GAMM1.480e-8073.26DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A2D7WD14_9GAMM2.550e-8071.51DNA topoisomerase 4 subunit A n=2 Tax=Spongiibacte... [more]
A0A6N1DN43_9GAMM4.490e-8072.67DNA topoisomerase 4 subunit A n=1 Tax=Ectothiorhod... [more]
A0A316FU70_9GAMM4.570e-8072.67DNA topoisomerase 4 subunit A n=1 Tax=Pleionea med... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002205DNA topoisomerase, type IIA, subunit A/C-terminalSMARTSM00434topIV4coord: 1..172
e-value: 4.7E-9
score: -104.6
IPR002205DNA topoisomerase, type IIA, subunit A/C-terminalPFAMPF00521DNA_topoisoIVcoord: 1..168
e-value: 5.0E-52
score: 177.2
NoneNo IPR availableGENE3D3.30.1360.40coord: 36..172
e-value: 3.3E-59
score: 201.3
NoneNo IPR availablePANTHERPTHR43493:SF1DNA TOPOISOMERASE 4 SUBUNIT Acoord: 1..172
NoneNo IPR availablePANTHERPTHR43493FAMILY NOT NAMEDcoord: 1..172
IPR013758DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-betaGENE3D3.90.199.10coord: 1..35
e-value: 6.8E-5
score: 25.2
IPR013760DNA topoisomerase, type IIA-like domain superfamilySUPERFAMILY56719Type II DNA topoisomerasecoord: 1..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124677contigM-pyrifera_M_contig124677:1..516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124677.5022.1mRNA_M-pyrifera_M_contig124677.5022.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124677 1..516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124677.5022.1 ID=prot_M-pyrifera_M_contig124677.5022.1|Name=mRNA_M-pyrifera_M_contig124677.5022.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp
KLAPYADLLLAELDQGTTDWKPNFDGTLDEPELLPARLPNLLLNGTTGIA
VGMATDIPPHNLREVAAACVHLIENPKATVADLCAHINGPDFPTEAEIIT
PSDEIRQAYETGHGSVKMRARYEIEKDAIAITALPYQTSGNKIIEQIAQQ
MQAKKLATLDDIRDESDHETPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002205Topo_IIA_A/C
IPR013758Topo_IIA_A/C_ab
IPR013760Topo_IIA-like_dom_sf