mRNA_M-pyrifera_M_contig124664.5018.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A5A8E9Y4_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E9Y4_CAFRO) HSP 1 Score: 77.4 bits (189), Expect = 1.080e-13 Identity = 56/145 (38.62%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 34 VSLLGFLWSEWDWGSESSILRPE---GDVVTAAETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALLPLPRQFRVELQRVHLLDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
+S L FL DWGS ++P+ DV T V VP LE + G++ + D LLH V L PIRV +++ S + LL L R HL D LR A++ V L+Q + +YH IRG A +KLYV+FNIL++
Sbjct: 99 LSALQFLLGSLDWGS----VQPDEAFSDVPTPVSLVFQ---VPWHLEQCLWLGVVIALDNLLHVVTLLPIRVASTVVSGVVQLLR-GTGLDSRLHRAHLFDALRFATALLGVYTLSQFEVGWMYHTIRGESAPVKLYVLFNILEV 235
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A5A8CCW7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CCW7_CAFRO) HSP 1 Score: 77.4 bits (189), Expect = 1.100e-13 Identity = 56/145 (38.62%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 34 VSLLGFLWSEWDWGSESSILRPE---GDVVTAAETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALLPLPRQFRVELQRVHLLDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
+S L FL DWGS ++P+ DV T V VP LE + G++ + D LLH V L PIRV +++ S + LL L R HL D LR A++ V L+Q + +YH IRG A +KLYV+FNIL++
Sbjct: 37 LSALQFLLGSLDWGS----VQPDEAFSDVPTPVSLVFQ---VPWHLEQCLWLGVVIALDNLLHVVTLLPIRVASTVVSGVVQLLR-GTGLDSRLHRAHLFDALRFATALLGVYTLSQFEVGWMYHTIRGESAPVKLYVLFNILEV 173
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A5A8CNX3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CNX3_CAFRO) HSP 1 Score: 77.4 bits (189), Expect = 1.110e-13 Identity = 56/145 (38.62%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 34 VSLLGFLWSEWDWGSESSILRPE---GDVVTAAETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALLPLPRQFRVELQRVHLLDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
+S L FL DWGS ++P+ DV T V VP LE + G++ + D LLH V L PIRV +++ S + LL L R HL D LR A++ V L+Q + +YH IRG A +KLYV+FNIL++
Sbjct: 99 LSALQFLLGSLDWGS----VQPDEAFSDVPTPVSLVFQ---VPWHLEQCLWLGVVIALDNLLHVVTLLPIRVASTVVSGVVQLLR-GTGLDSRLHRAHLFDALRFATALLGVYTLSQFEVGWMYHTIRGESAPVKLYVLFNILEV 235
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A7S3PFZ7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFZ7_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.510e-13 Identity = 50/123 (40.65%), Postives = 70/123 (56.91%), Query Frame = 1
Query: 109 VVTAAETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFL-ALLPL-----PRQFRVELQRVHLLDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
++ A + + +F+ VP+ LE + G D LL V PIR++ +L LF ALLP R V R L D+LRG +++ L L Q+ MSQ+YH++RG IKLYVMFN+LDI
Sbjct: 161 LLNAKDDMFNFIRVPLHLEQLMFHGFFMCLDSLLFMVTYLPIRIMRALYLLFYTALLPKHVRERSRLLNVRFHRTQLYDLLRGSIIVIAFLALLQVQMSQIYHFVRGQ-TFIKLYVMFNMLDI 282
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A7S2RIS4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RIS4_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 5.450e-13 Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 34 VSLLGFLWSEWDWGSESSILRPEGDVVTAAETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALLP--LPRQFRVELQRVHLLDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
+ FLW D G E + V+ + V +F+ VP+ +E + +G D LL + P+R++ ++ L L + LP +FR R L DVLR + V+ + L Q+ MS++YH++RG A IKLYV+FN+LDI
Sbjct: 356 IGFFDFLWH--DLGCEPEEDKISSKYVSVEDDVFNFIRVPLEVESLLFYGFFMCLDSLLFVIVYLPLRMLRAVLLLVLTVFVPRLPERFRFH--RTQLYDVLRIVMLSVAFVFLLQVHMSRIYHYVRGQ-AFIKLYVIFNMLDI 494
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A267DP20_9PLAT (Uncharacterized protein (Fragment) n=7 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DP20_9PLAT) HSP 1 Score: 72.4 bits (176), Expect = 6.090e-12 Identity = 61/166 (36.75%), Postives = 82/166 (49.40%), Query Frame = 1
Query: 1 GVGGGVGGGRGVSLLG-----FLWSEWDWGSESSILRPEGDVVTAAET--VHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALLPLPRQFRVELQRVHLL-----DVLRGLAAIVSVLLLAQMPMSQV-YHWIRGGGATIKLYVMFNILDI 459
G GGG GG G LL LWS S+ P+ D A V+ F+ +P+A+E F+ FG+LA D LLH L P+R +L LF R HLL D+L GL +V+ L+ Q+ S V YH+IR + IKLY+ FN+L+I
Sbjct: 19 GSGGGNGGHFGAPLLAQPPRRSLWSSLRAEVTSAYGGPDDDEKLRAHRHRVYTFLTIPLAMERFIQFGLLACLDTLLHLCTLLPLRCAYALWRLFYG-------------RAHLLHSQKSDLLHGLLLVVTTCLIVQLTDSSVIYHFIRSQ-SVIKLYIFFNMLEI 170
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A2R5GBA1_9STRA (Transmembrane anterior posterior transformation protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBA1_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 8.890e-12 Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 22 GGRGVSLLGFLWSEWDWGSESSILRPEGDVVTAAETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALLPLPRQF--RVELQRVHLLDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
GG VS ++W + + +E + + + V +F+ VP+ +E + FG D LL + P+RVV +L L L+ +P ++ + R L D+LR ++ +L Q+ MS++YH++RG A IKLYV+FN+LDI
Sbjct: 445 GGSPVSFFDWVWQDLGFETEEDQAFSSKNA-SVEDDVFNFIRVPLEVEKLLIFGFFLCCDSLLFVLVYLPVRVVRALFLLVCTLI-VPSRYGAHFKFHRTQLYDLLRASIIAIAFAVLLQVHMSRIYHYVRGQ-AFIKLYVIFNMLDI 589
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A5E8BXB8_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BXB8_9ASCO) HSP 1 Score: 71.6 bits (174), Expect = 1.220e-11 Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 124 ETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALLPLPRQFRVELQRVHL---LDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
E + +F+ +P LE + FG LA D L+ + P+R ++ LFL R FR++ Q++ L +D+++G+ + + LL Q+ S++YH IRG A IKLYVMFN+L+I
Sbjct: 299 EQLGNFIRLPFYLERVIIFGSLACFDSFLYIFTILPLRFCYAIIHLFL------RMFRLKKQKIPLTRKIDIIKGIVFLAVLYLLMQLDTSKIYHGIRGQSA-IKLYVMFNVLEI 406
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A0E9NCF7_SAICN (Uncharacterized protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NCF7_SAICN) HSP 1 Score: 69.7 bits (169), Expect = 5.510e-11 Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 106 DVVTAAETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALL------PLPRQFRVELQRVHLLDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
D+ E V +F+ +P ALE + FG L D L+ + P+R + +L SLF +LL P+P L+ D+LR L ++S L+ S++YH IRG A+IKLYV+FN+L++
Sbjct: 200 DIAVKQERVSNFLKIPGALEEVMAFGWLVCLDAFLYTFTILPLRFLLALPSLFSSLLSYTPIPPIPSSPPSHLKTSQKHDLLRFLLVLLSTSFLSLFDASKMYHTIRGQ-ASIKLYVIFNLLEV 322
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Match: A0A7S0J7C5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J7C5_9EUKA) HSP 1 Score: 68.6 bits (166), Expect = 1.310e-10 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 106 DVVTAAETVHDFVHVPMALEGFVCFGMLASADILLHHVALFPIRVVTSLGSLFLALLPLPRQFRVELQRVHLLDVLRGLAAIVSVLLLAQMPMSQVYHWIRGGGATIKLYVMFNILDI 459
D+ E +++F +VP LE + FG LA D + PIRVV++L +L P P Q R D+LRG + LL ++ MSQ YH +R +TIKLYV+FNIL+I
Sbjct: 124 DLQRRREGIYNFFYVPRNLERLLLFGYLACFDSFVQQFTFLPIRVVSALTTLLCWHRPTPAQKR---------DLLRGTLIFLVSFLLLRINMSQTYHNVRNQ-STIKLYVVFNILEI 231 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124664.5018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124664.5018.1 >prot_M-pyrifera_M_contig124664.5018.1 ID=prot_M-pyrifera_M_contig124664.5018.1|Name=mRNA_M-pyrifera_M_contig124664.5018.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp GVGGGVGGGRGVSLLGFLWSEWDWGSESSILRPEGDVVTAAETVHDFVHVback to top mRNA from alignment at M-pyrifera_M_contig124664:60..518+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124664.5018.1 ID=mRNA_M-pyrifera_M_contig124664.5018.1|Name=mRNA_M-pyrifera_M_contig124664.5018.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig124664:60..518+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124664:60..518+ >mRNA_M-pyrifera_M_contig124664.5018.1 ID=mRNA_M-pyrifera_M_contig124664.5018.1|Name=mRNA_M-pyrifera_M_contig124664.5018.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig124664:60..518+ (Macrocystis pyrifera P11B4 male)back to top |