prot_M-pyrifera_M_contig124607.5000.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124607.5000.1
Unique Nameprot_M-pyrifera_M_contig124607.5000.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124607.5000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 83..116
e-value: 0.1
score: 21.7
coord: 117..150
e-value: 0.0029
score: 26.8
IPR019734Tetratricopeptide repeatPFAMPF13176TPR_7coord: 119..152
e-value: 9.6E-5
score: 22.2
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 83..114
e-value: 0.2
score: 12.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 117..150
score: 8.85
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 83..116
score: 8.467
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 39..167
e-value: 5.6E-16
score: 60.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 70..163
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 83..150
score: 14.819

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124607contigM-pyrifera_M_contig124607:13..513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124607.5000.1mRNA_M-pyrifera_M_contig124607.5000.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124607 1..513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124607.5000.1 ID=prot_M-pyrifera_M_contig124607.5000.1|Name=mRNA_M-pyrifera_M_contig124607.5000.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
MLDYAGTPLVASEFGDQENIARHTHPVADYAERWRTRYDEPERATLGREL
LDELGADLVTAMGYDFDAATALLAAAGQAAGSADALTGKGEACFAAGDLE
AAERLFLDAVNVDPGFSLAHNNLGVLCAAREDHKRAIECFIAALTIHPAE
RDAIVNLIECAAAANRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom