prot_M-pyrifera_M_contig99978.22989.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99978.22989.1
Unique Nameprot_M-pyrifera_M_contig99978.22989.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
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BLAST of mRNA_M-pyrifera_M_contig99978.22989.1 vs. uniprot
Match: A0A812KHN9_9DINO (Gpr137b protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KHN9_9DINO)

HSP 1 Score: 55.1 bits (131), Expect = 2.060e-6
Identity = 33/105 (31.43%), Postives = 56/105 (53.33%), Query Frame = 0 
Query:    1 SALIFLALAVTFMFQAWYLSRMSTEEARRLGIFQPRSLVVTCSCLVVIFVTRVAWDIAAAAGRSFASVALDAHSPSKVARLLVAYIWWEDVPVWILIFVIAGAKV 105
            S +IF  LA  F +  +++  +  ++  R+ + +P S+      L V+FV+R  +D+  AAG    S    A S   VA  + AY+WWE +P+ +L+  IA  +V
Sbjct:  148 SGIIFGFLASAFAWVTYHVLHLEPQQYSRMFMMRPTSVAAVVVVLFVVFVSRAVFDVVTAAGAVTISTGGQA-STEDVAIFVSAYLWWEVLPIVLLLATIAAGRV 251
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99978.22989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A812KHN9_9DINO2.060e-631.43Gpr137b protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..81
NoneNo IPR availableTMHMMTMhelixcoord: 2..19
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99978contigM-pyrifera_M_contig99978:125..469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99978.22989.1mRNA_M-pyrifera_M_contig99978.22989.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99978 125..469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99978.22989.1 ID=prot_M-pyrifera_M_contig99978.22989.1|Name=mRNA_M-pyrifera_M_contig99978.22989.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
SALIFLALAVTFMFQAWYLSRMSTEEARRLGIFQPRSLVVTCSCLVVIFV
TRVAWDIAAAAGRSFASVALDAHSPSKVARLLVAYIWWEDVPVWILIFVI
AGAKVGDGVRRSGWA
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