prot_M-pyrifera_M_contig9780.22519.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9780.22519.1
Unique Nameprot_M-pyrifera_M_contig9780.22519.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length318
Homology
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BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: D7G1I2_ECTSI (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I2_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 2.140e-43
Identity = 164/267 (61.42%), Postives = 184/267 (68.91%), Query Frame = 0 
Query:    1 VHGKLGQHEEAIDCYRRSIAVRPAAPAYVAWALVVARMADRAEKEASSLTVGNAFHDGSPSTVAEIQLXXXXXXXXXXXXXXXXXXXXXSTPTESCNFAIDAEEADDGSDGRLTGAKGGELASHDEARRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGRYPKNTQLLLGAALAETKMSNTDQGRD 267
            VHGKLG++EEAI+CYRRSIA+ PAAPAYVAWALVVA++A+RAE+ ASS         G  +    ++                      S  T   N   D     +G   R    +G    S++EARRLFELGI ADP HGPLYNAYG+MEAK GNVEHAR+VYKRGIAARC+G   VWQG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RYP  +QLLLGA LA  KM   D  R+
Sbjct:  452 VHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGPKYGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGTADEN---DGXXXXEGGVSRTEEEEG--PPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARNVYKRGIAARCSGAVHVWQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERYPSGSQLLLGAGLAIAKMGEPDNARE 713
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BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: A0A6H5L0Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y9_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 2.270e-41
Identity = 113/280 (40.36%), Postives = 131/280 (46.79%), Query Frame = 0 
Query:    1 VHGKLGQHEEAIDCYRRSIAVRPAAPAYVAWALVVARMADRAEKEASSL-TVGNAFHD---GSPSTVAEIQLXXXXXXXXXXXXXXXXXXXXXSTPTESCNF-----AIDAEEADDGSDGRLTGAKGGELASHDEARRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GIGRYPKNTQLLLGAALAETKMSNTDQGRD 267
            VHGKLG++EEAI+CYRRSIA+ PAAPAYVAWALVVA++A+RAE+ ASS  T      D   G P  V E                         T  E          +   E ++G              S++EARRLFELGI ADP HGPLYNAYG+MEAK GNVEHAR VYKRGIAARC+G   VWQG                                                           G+ RYP  +QLLLGA LA  KM   D  R+
Sbjct:  531 VHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKETAAGQEQDVVAGDP--VVEYVGDASDDGTILGEASDAVAGGSGGTAAEXXXXXXXXXGVSRTEEEEGP------------PSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKARPTIFARGIRESSEDVSFLCHSLGSLELAADRLGEARAVFLAGVERYPNGSQLLLGAGLAIAKMGEPDNARE 796
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BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: A0A835Z4V8_9STRA (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.870e-31
Identity = 139/286 (48.60%), Postives = 165/286 (57.69%), Query Frame = 0 
Query:   15 YRRSIAVRPAAPAYVAWALVVARMADRAEKEASSLTVGNAFHDGSPSTVAEIQLXXXXXXXXXXXXXXXXXXXXXSTPTESCNFAIDAEEADDGSDGRLTGAKGGELASHD--------EARRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIG--RYPKNTQLLLGAALAETKMSNTDQGRDFFRRAVQADPSHAHAWQAWGVME 290
            YR S  +RP APA+VAWAL+  ++A  AE+ A++    +                                     TP+ +     DA +A   S G+  G +    A  D         ARRLFELGI ADP HGPLYNAYG  EA+ G+V+ AR V++RG+AA C  MASVW GLXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXX     R P N+ LLLGAALAE ++    + R+FFRRAV AD  HAHAWQAWGV+E
Sbjct:  363 YRASTQIRPTAPAFVAWALLEDKLA--AERAAAAXXATDL------------------------------------TPSPNSKEDDDATDAILTSTGKRLGLERARSAEADADVERCRANARRLFELGIRADPKHGPLYNAYGATEARWGDVDAARAVFRRGVAAHCTDMASVWHGLXXXXXXXXXXXXXXXXXXXXMSEAGATEDVSFLSXXXXXXXXXXXXXXXXXXXXXXXXXRAPTNSPLLLGAALAEVRLGCLAEAREFFRRAVVADRGHAHAWQAWGVLE 610
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BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: A0A7S2K0W9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0W9_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.890e-18
Identity = 74/172 (43.02%), Postives = 90/172 (52.33%), Query Frame = 0 
Query:  128 RRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------GIGRYPKNTQLLLGAALAETKMSNTDQGRDFFRRAVQADPSHAHAWQAWGVM 289
            R LFE  +  +P HGP YNAYG ME K G +  +R++++RGIAA C   AS++   XXXXXXXXXXXXXXXXX                                               GI R+  ++QLLLGAALAE ++ N D  R  F  +V AD  HAHAWQAWGVM
Sbjct:   72 RSLFEEALLVNPRHGPAYNAYGVMELKHGGLNKSREIFQRGIAANCADPASLYHXXXXXXXXXXXXXXXXXXXKTGLNEIIKTDSIATAQHERSVFLHHTLGMLELNSHRVSDAKSVFQEGIKRHGNSSQLLLGAALAEVRLGNEDAARLLFESSVNADRKHAHAWQAWGVM 243
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BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: A0A1E7ERC4_9STRA (TPR-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERC4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.640e-16
Identity = 75/176 (42.61%), Postives = 91/176 (51.70%), Query Frame = 0 
Query:  128 RRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------GIGRYPKNTQLLLGAALAETKMSNTDQGRDFFRRAVQADPSHAHAWQAWGVME 290
            R LFE  +  DP +GP YNAYG  E +RGN++ AR +++RG A  C+  AS+    XXXXXXXXXXXXXXXXXXX                                                G+ R   ++QLLLGAAL E +M   +  R FF R+V AD  HAHAWQAWGVME
Sbjct:  363 RGLFEEALMLDPRNGPAYNAYGNAELRRGNLQEARIIFERGTAMNCSDSASLXXXXXXXXXXXXXXXXXXXXXXXGLDTVRRNEDNVSSDTPNRDRAAFLSHTLGMLELNSNRPLDAFGIFMDGLDRCGNSSQLLLGAALCEMRMGKDEGARGFFERSVVADNKHAHAWQAWGVME 538
[Close]
BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: A0A7S2DH37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH37_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.740e-16
Identity = 41/58 (70.69%), Postives = 46/58 (79.31%), Query Frame = 0 
Query:  126 EARRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGL 183
            EARRLFELGI ADP+HGPLYNAYG MEA+  N + AR V +RGIAA+C  MA VW GL
Sbjct:  322 EARRLFELGIKADPSHGPLYNAYGAMEARHRNFQEARLVLERGIAAKCTDMAHVWHGL 379
[Close]
BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: A0A7S1XN54_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XN54_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.020e-15
Identity = 83/183 (45.36%), Postives = 100/183 (54.64%), Query Frame = 0 
Query:  127 ARRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------GIGRYPKNTQLLLGAALAETKMSNTDQGRDFFRRAVQADPSHAHAWQAW 286
            ARRLF+ G+T DP HG LYNAY TMEA+ GNV  AR +Y  G+A+   G++     LXXXXXXXXXXXXXXXXXXXXXXXX                                                     G+ RYP ++QLLLGAALAE K +N D+ R+FFR++  A+  HA AWQAW
Sbjct:  602 ARRLFQEGLTQDPNHGALYNAYATMEARYGNVTGARAIYSAGLAS---GVSECQVSLXXXXXXXXXXXXXXXXXXXXXXXXISVLRKARGMESAEFCYHSLGMSYLSANHQLQAAPNAEYVAPNATAAALVFAEGLQRYPASSQLLLGAALAEVKRNNLDRAREFFRKSAAANKRHAQAWQAW 781
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BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: R7Q4Y4_CHOCR (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y4_CHOCR)

HSP 1 Score: 87.8 bits (216), Expect = 1.750e-15
Identity = 63/174 (36.21%), Postives = 82/174 (47.13%), Query Frame = 0 
Query:  123 SHDEARRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-IGRYPKNTQLLLGAALAETK-----MSNTDQGRDFFRRAVQADPSHAHAWQAWGVME 290
            +++EA RLFE  +T DP HG  YNA             AR VY RG+ A  +  +SVW G                                 XXXXXX                  + RYP+N+++L+GAALAE       +++ +  RDFF+RAV ADP+HAHAWQAWGV E
Sbjct:  455 NYEEANRLFEECLTIDPLHGAAYNAXXXXXXXXXXXXKARSVYGRGLKACAS--SSVWHGYGQLELKLGGDPARARELFRKGTEKTRGDTSFIXXXXXXLELTEKRVIEARQLFKNALKRYPRNSRVLVGAALAEAASCPQYIADKNSARDFFKRAVAADPTHAHAWQAWGVFE 626
[Close]
BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: A0A7S1TKT4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKT4_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 2.790e-15
Identity = 52/176 (29.55%), Postives = 72/176 (40.91%), Query Frame = 0 
Query:  127 ARRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGRYPKNTQLLLGAALAET------------KMSNTDQGRDFFRRAVQADPSHAHAWQAWGVME 290
            AR+ F+  I  DP HGP YNAY  ME + GNV  A +VY+  ++  C G  SV+QG                                                        + RYP N+++L+ A LA               +S+ ++ R++FRRAV ADP  A AWQ WG+ E
Sbjct:    4 ARQYFKRAIEVDPRHGPAYNAYAMMEVRLGNVVRACEVYEECVSL-CVGTVSVYQGYAQLMMQRGENDCARDLLRAGVQLTREETVFLWHSWIMLEVRLKNVQEAERVMRSALRRYPNNSRILVSAGLASACSGAVPVKAEDGVLSHFERAREYFRRAVLADPKQAQAWQTWGLFE 178
[Close]
BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Match: B8CBP7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBP7_THAPS)

HSP 1 Score: 84.7 bits (208), Expect = 1.770e-14
Identity = 50/174 (28.74%), Postives = 73/174 (41.95%), Query Frame = 0 
Query:  128 RRLFELGITADPAHGPLYNAYGTMEAKRGNVEHARDVYKRGIAARCNGMASVWQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------GIGRYPKNTQLLLGAALAETKMSNTDQGRDFFRRAVQADPSHAHAWQAWGVM 289
            RRLF+  +  DP HGP YNA+G +E ++GN+  A+ +Y+ G+ A C   +SV+ GL                                                                  G+     ++ LLLG AL E+++ N    RD F +A++ADP HA AWQA+GVM
Sbjct:  280 RRLFQEALLIDPKHGPAYNAFGNLERRQGNIAVAKQLYEDGVNANCTDASSVYHGLAKLHISLGEIEDARNVLQRGLSLFRPKGNSNFVQRNENVAFLAHTLAMIELNCNNNAKAAKEILNQGLWHRRSSSPLLLGKALVESRLGNEYGARDMFEQAIKADPDHAQAWQAFGVM 453
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9780.22519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7G1I2_ECTSI2.140e-4361.42PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
A0A6H5L0Y9_9PHAE2.270e-4140.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4V8_9STRA1.870e-3148.60PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
A0A7S2K0W9_9STRA3.890e-1843.02Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1E7ERC4_9STRA3.640e-1642.61TPR-like protein n=1 Tax=Fragilariopsis cylindrus ... [more]
A0A7S2DH37_9STRA6.740e-1670.69Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XN54_9STRA1.020e-1545.36Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
R7Q4Y4_CHOCR1.750e-1536.21TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S1TKT4_9RHOD2.790e-1529.55Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
B8CBP7_THAPS1.770e-1428.74Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 1..25
e-value: 280.0
score: 2.2
coord: 177..210
e-value: 180.0
score: 4.0
coord: 212..245
e-value: 160.0
score: 4.3
coord: 280..313
e-value: 87.0
score: 6.7
coord: 246..279
e-value: 15.0
score: 13.3
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 2..23
e-value: 0.032
score: 14.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1..25
score: 6.372
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 177..210
score: 6.166
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 280..313
score: 7.169
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 212..245
score: 6.402
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 246..279
score: 8.024
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 142..175
score: 5.163
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 260..292
e-value: 85.0
score: 8.6
coord: 294..318
e-value: 770.0
score: 1.6
coord: 156..189
e-value: 46.0
score: 10.5
coord: 122..154
e-value: 11.0
score: 15.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 256..318
e-value: 2.1E-10
score: 42.3
coord: 100..255
e-value: 1.4E-19
score: 72.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..58
e-value: 1.9E-5
score: 26.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..311
NoneNo IPR availablePFAMPF13432TPR_16coord: 218..279
e-value: 0.0047
score: 17.6
NoneNo IPR availablePANTHERPTHR44917FAMILY NOT NAMEDcoord: 179..318
coord: 121..202
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..25
score: 9.395
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 120..313
score: 22.398

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9780contigM-pyrifera_M_contig9780:1195..10422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9780.22519.1mRNA_M-pyrifera_M_contig9780.22519.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9780 1195..10422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9780.22519.1 ID=prot_M-pyrifera_M_contig9780.22519.1|Name=mRNA_M-pyrifera_M_contig9780.22519.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=318bp
VHGKLGQHEEAIDCYRRSIAVRPAAPAYVAWALVVARMADRAEKEASSLT
VGNAFHDGSPSTVAEIQLQLESTATATSTPTATPTATAASTPTESCNFAI
DAEEADDGSDGRLTGAKGGELASHDEARRLFELGITADPAHGPLYNAYGT
MEAKRGNVEHARDVYKRGIAARCNGMASVWQGLGALEASVGNRDGARKIF
LRGARESTDDVSFLYHSLGSLELTAMRLEDARAAFVEGIGRYPKNTQLLL
GAALAETKMSNTDQGRDFFRRAVQADPSHAHAWQAWGVMEGRLGNYEVAR
SLWESGLKANPLHGPLWQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom