prot_M-pyrifera_M_contig97710.22503.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig97710.22503.1
Unique Nameprot_M-pyrifera_M_contig97710.22503.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length141
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97710.22503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..127
e-value: 3.5E-18
score: 67.2
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 1..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97710contigM-pyrifera_M_contig97710:280..702 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97710.22503.1mRNA_M-pyrifera_M_contig97710.22503.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig97710 280..702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig97710.22503.1 ID=prot_M-pyrifera_M_contig97710.22503.1|Name=mRNA_M-pyrifera_M_contig97710.22503.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp
LSRCGNVQQLEAWMGRLPSLKELDLSESGVVDLSALNDMAHGSLPFLEIL
SLKGCRSVQKLEAWIARLPSLSAFDLSSSGVVDLCALNGMAPGSLSQLQT
LNLSDCRMLEHLPWRLCELDLDEFVVSGSDGILHYDFLLRS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf