prot_M-pyrifera_M_contig97543.22471.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig97543.22471.1
Unique Nameprot_M-pyrifera_M_contig97543.22471.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length75
Homology
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BLAST of mRNA_M-pyrifera_M_contig97543.22471.1 vs. uniprot
Match: A0A6A4ZZJ8_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZJ8_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 6.670e-7
Identity = 34/75 (45.33%), Postives = 42/75 (56.00%), Query Frame = 0 
Query:    1 LHTHPLITRGSLQLQELASALPALAIQHHLLHNPFPLSPWCAIDTCAAPGNKTVQLCEAVHTLQPNPKDSKIQGV 75
            LH HPLI +G L +Q+LAS LP   +      + F      AIDTCAAPGNKT QL  A       PK+ ++Q V
Sbjct:  195 LHGHPLIKKGCLFVQDLASCLPVACLAPQASAHDF------AIDTCAAPGNKTTQL--AAKLALGKPKNRRVQVV 261
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BLAST of mRNA_M-pyrifera_M_contig97543.22471.1 vs. uniprot
Match: A0A024U9Q2_9STRA (SAM_MT_RSMB_NOP domain-containing protein (Fragment) n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9Q2_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 9.140e-7
Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 0 
Query:    1 LHTHPLITRGSLQLQELASALPALAIQHHLLHNPFPLSPWCAIDTCAAPGNKTVQLCEAVHTLQPNPKDSKIQGV 75
            LH HPLI +G L +Q+LAS LP   +    + +        AIDTCAAPGNKT QL  A       PK  ++Q V
Sbjct:  195 LHGHPLIKKGCLFVQDLASCLPVACVAAQAMDHDV------AIDTCAAPGNKTTQL--AARLALGKPKSRRVQVV 261
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97543.22471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6A4ZZJ8_9STRA6.670e-745.33SAM_MT_RSMB_NOP domain-containing protein n=6 Tax=... [more]
A0A024U9Q2_9STRA9.140e-744.00SAM_MT_RSMB_NOP domain-containing protein (Fragmen... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 1..74
e-value: 1.5E-10
score: 42.6
IPR001678SAM-dependent methyltransferase RsmB/NOP2-typePROSITEPS51686SAM_MT_RSMB_NOPcoord: 1..75
score: 11.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97543contigM-pyrifera_M_contig97543:52..276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97543.22471.1mRNA_M-pyrifera_M_contig97543.22471.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig97543 52..276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig97543.22471.1 ID=prot_M-pyrifera_M_contig97543.22471.1|Name=mRNA_M-pyrifera_M_contig97543.22471.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
LHTHPLITRGSLQLQELASALPALAIQHHLLHNPFPLSPWCAIDTCAAPG
NKTVQLCEAVHTLQPNPKDSKIQGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001678MeTrfase_RsmB/NOP2