prot_M-pyrifera_M_contig975.22456.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig975.22456.1
Unique Name	prot_M-pyrifera_M_contig975.22456.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	246

Homology

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BLAST of mRNA_M-pyrifera_M_contig975.22456.1 vs. uniprot
Match: D7FGS9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGS9_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 2.840e-26
Identity = 111/248 (44.76%), Postives = 144/248 (58.06%), Query Frame = 0

Query:    3 WWRRVQQAFVKPSSPSSLKKNASENLSFLQKKYGDLAKDK-GEDLRKSLKTSVSDYGKQAKSAPQDLKARSVELGRQARVRAEKATSGLGKQLGDSARALPSRTVEVATKAAQGAAAAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXAMPKVGAYANETGRRIAYVILGTAFLYGLGSSLPGAVGRYYTEKDRRRGEEAKGRGGDASDGGDSLSSTRVEEARGVS----GGEPTLLGIGKVEQWVRDR 245
            WWR++QQ   KPSS   LKK A  NLSFL+KKYG++A  K  +D+R +++ +V                +S   G+ AR RAE ATS +GKQ  +SAR++PS+                  XXXXXXXXXXXXXXXXXXXXXXXXXX             RRI  ++LGTAFLYG+GS LPGAV RY+TEKDRRR EE + +   A       SS R  +  G +     G+ + L + ++E+W+R R
Sbjct:   26 WWRKIQQTLPKPSS---LKKTARGNLSFLEKKYGEVAAGKDAKDVRNAVRNTVK---------------KSASYGKSARDRAEDATSRVGKQFVESARSIPSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRIVLLLLGTAFLYGVGSGLPGAVARYFTEKDRRRYEEGRRKSLGADGESSPSSSARAMDLDGTAVVEAAGQISSLFVVEIERWLRKR 255

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig975.22456.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig975.22456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FGS9_ECTSI	2.840e-26	44.76	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..41
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 187..245
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 164..186
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..163
None	No IPR available	TMHMM	TMhelix		coord: 164..186

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig975	contig	M-pyrifera_M_contig975:15045..16840 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig975.22456.1	mRNA_M-pyrifera_M_contig975.22456.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig975 15045..16840 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig975.22456.1 ID=prot_M-pyrifera_M_contig975.22456.1|Name=mRNA_M-pyrifera_M_contig975.22456.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
MSWWRRVQQAFVKPSSPSSLKKNASENLSFLQKKYGDLAKDKGEDLRKSL
KTSVSDYGKQAKSAPQDLKARSVELGRQARVRAEKATSGLGKQLGDSARA
LPSRTVEVATKAAQGAAAAGAEAAQSAASAGVKAATDAGRRATSKARDAM
PKVGAYANETGRRIAYVILGTAFLYGLGSSLPGAVGRYYTEKDRRRGEEA
KGRGGDASDGGDSLSSTRVEEARGVSGGEPTLLGIGKVEQWVRDR*