prot_M-pyrifera_M_contig9698.22336.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9698.22336.1
Unique Nameprot_M-pyrifera_M_contig9698.22336.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length227
Homology
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: D8LGB8_ECTSI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplast n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGB8_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 1.880e-123
Identity = 183/228 (80.26%), Postives = 198/228 (86.84%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGG-NKAEFIEKFKNAMSENFDPD 227
            MSDEFTS I++EFKEN G ITRGDTTF+LA  YGFCWGVERAVAMAFQAR+HFPD+TMHITNELIHNPGVNEKLDEMGVNFVPVS  G KDL++I DGDVVILPAFGASLEEMQTLD+KNVQVVDTTCPWVSKVWNTVDKHTKA+FTSVIHGKWAHEETVAT+SFC+K                  YLVVK MAEAEYVA+Y+ANGG +KAEF+EKFKNAMSE FDPD
Sbjct:   80 MSDEFTSDIISEFKENKGSITRGDTTFKLAEYYGFCWGVERAVAMAFQARKHFPDKTMHITNELIHNPGVNEKLDEMGVNFVPVSDKGGKDLETIDDGDVVILPAFGASLEEMQTLDEKNVQVVDTTCPWVSKVWNTVDKHTKAQFTSVIHGKWAHEETVATASFCDK------------------YLVVKNMAEAEYVAAYIANGGGDKAEFMEKFKNAMSEGFDPD 289          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: A0A835ZE64_9STRA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE64_9STRA)

HSP 1 Score: 304 bits (778), Expect = 6.190e-99
Identity = 146/227 (64.32%), Postives = 175/227 (77.09%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            M +EFTS +V E K N+  + +GD T +LA D+GFCWGVERAVAM+FQAR+HFP   MHITNELIHNPGVNEKLDEM + FVPV+ +G KD  +I+DGDVVILPAFGA+LEEMQ LD K+VQ+VDTTCPWVSKVWNTVDKHTK +FT+V+HGK+AHEET+ATSSF +K                  Y+VVK + EA+YVA Y+ NGGNK EF+ KF  A+S  FDPD
Sbjct:   78 MLEEFTSPMVKELKSNSNVLQKGDVTVKLAQDFGFCWGVERAVAMSFQARKHFPSTKMHITNELIHNPGVNEKLDEMDIEFVPVNENGKKDFSAIQDGDVVILPAFGATLEEMQLLDSKDVQIVDTTCPWVSKVWNTVDKHTKMQFTTVMHGKYAHEETIATSSFADK------------------YIVVKDLKEAQYVADYIVNGGNKEEFLAKFSMALSAGFDPD 286          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: A0A7S3YXS9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YXS9_9EUKA)

HSP 1 Score: 280 bits (715), Expect = 5.520e-89
Identity = 133/227 (58.59%), Postives = 168/227 (74.01%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            M DEF S ++   + N   +  GD TFRLA D+GFCWGVERAV MA +A+ H+ D+T+HITNE+IHNPGVNEK+ +MG+ F+PV  DG+KD   + + DVVILPAFGA+LEEM+ L D+ VQ+VDTTCPWVSKVWN+VD HT+   TS+IHG W+HEET+AT+SF E                   Y++VK MAEAEYV +YM NGG+KAEF+EKFKNA+S+ FDPD
Sbjct:  122 MFDEFQSDLIKSMRTNYYTMQEGDITFRLAKDFGFCWGVERAVQMAIEAQMHYGDKTIHITNEIIHNPGVNEKMADMGIKFIPVV-DGVKDFSQVGNDDVVILPAFGATLEEMRMLTDRGVQIVDTTCPWVSKVWNSVDMHTRQGMTSIIHGTWSHEETIATASFAED------------------YIIVKNMAEAEYVINYMLNGGDKAEFMEKFKNAVSKGFDPD 329          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: L1JFG8_GUITC (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFG8_GUITC)

HSP 1 Score: 276 bits (705), Expect = 3.540e-88
Identity = 132/227 (58.15%), Postives = 163/227 (71.81%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            M +EFTS +V E KENN  I R +   +LA  YGFCWGVERAVAMA++AR  + D  +HITNE+IHNPGVN +L +MG NFVPV+G G+KD   +K+GDVV+LPAFGASLEEMQ LD K  ++VDTTCPWVSKVWN VD H + + TSVIHGKWAHEE++AT+S  +                   Y+++K M EA+YV +Y+ NGGNK EF+ KFKNA S  FDPD
Sbjct:   60 MVEEFTSDMVKELKENNNVIERNNVVIKLAESYGFCWGVERAVAMAYEARSFYKDDKIHITNEIIHNPGVNGRLKDMGYNFVPVNG-GVKDFSDVKEGDVVVLPAFGASLEEMQLLDSKGCRIVDTTCPWVSKVWNAVDTHRRKDMTSVIHGKWAHEESIATASMADT------------------YIIIKDMEEAKYVTNYILNGGNKEEFMAKFKNACSSGFDPD 267          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: W7TLS9_9STRA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLS9_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.310e-86
Identity = 130/227 (57.27%), Postives = 168/227 (74.01%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            M  EFTS+++ E K++     +GD T +LA  +GFCWGVERAVAMA++AR HFP+Q +HITNE+IHNPGVNE+L +M ++F+PV  +G K  + I+  DVVILPAFGA+++EMQ LD K VQ+VDTTCPWV+KVW  V+KH K E TSVIHGKW HEET+AT+SF +                   Y++VK + EAEYV +Y+ NGG+KAEF+EKFKNA+SE FDPD
Sbjct:   97 MVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVD-EGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADV------------------YIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPD 304          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: A0A7S0MIF1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MIF1_9CRYP)

HSP 1 Score: 270 bits (691), Expect = 8.030e-86
Identity = 130/227 (57.27%), Postives = 165/227 (72.69%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            M++EFTS +V + +ENN  + R +   +LA  YGFCWGV+RAVA+A++AR+ + D  +HITNE+IHNP VN +L +M +NF+ +  DG KD   +K GDVVILPAFGASL EMQ LD K V++VDTTCPWVSKVWN VD HT+ + TSVIHGKWAHEE++AT+SF +                   YL+VK + EAEYVA Y+ NGG+KAEF+ KFKNAMSE FDPD
Sbjct:   85 MAEEFTSDLVKQLRENNYVLERNNVVIKLAKSYGFCWGVDRAVALAYEARKFYKDDKIHITNEIIHNPSVNTRLRQMDINFIGLK-DGEKDFSDVKKGDVVILPAFGASLPEMQLLDAKGVKIVDTTCPWVSKVWNAVDAHTRKDMTSVIHGKWAHEESIATASFADT------------------YLIVKDIHEAEYVADYILNGGDKAEFMRKFKNAMSEGFDPD 292          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: UPI0016805B9D (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Anabaena sp. FACHB-1237 TaxID=2692769 RepID=UPI0016805B9D)

HSP 1 Score: 267 bits (683), Expect = 2.800e-85
Identity = 128/227 (56.39%), Postives = 159/227 (70.04%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            +  E+ S ++ E ++ N  +TRGD T RLA  +GFCWGVERAVAMA++ RQHFP Q + ITNE+IHNP VN+++ EMGV F+PV  D  KD   +   DVVILPAFGAS+EEMQ L+DK  Q+VDTTCPWVSKVWNTV+KH K ++TS+IHGK+ HEETVATSSF  K                  YL+V  + EAEYV +Y+ NGGN+ EF+ KF  A S  FDPD
Sbjct:   31 LQSEYQSNLIQEIRDRNYTLTRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPTQNIWITNEIIHNPSVNKRMQEMGVEFIPVM-DNKKDFSVVNQSDVVILPAFGASVEEMQILNDKGCQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYKHEETVATSSFAGK------------------YLIVLNLKEAEYVTNYILNGGNREEFLAKFSKACSSGFDPD 238          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: A0A6U4E9P0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4E9P0_9STRA)

HSP 1 Score: 268 bits (684), Expect = 5.310e-85
Identity = 132/228 (57.89%), Postives = 159/228 (69.74%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGM-KDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            M  EF S ++   + +    T GD T ++A   GFCWGVERAVAMA + R+HFP+  +HITNE+IHNP VNE L   GV  +P  G G  KD   +K+ DVVILPAFGASLEEMQ LDDK V+VVD TCPWVSKVWNTVD+H + + TSVIHGKW HEET+AT+SFCE                   YL++K   EA+YVA+Y+ NGG+KAEF+EKFKNAMSE FDPD
Sbjct:   64 MEGEFKSDMLEGMRTSKYERTVGDVTIKMAEHLGFCWGVERAVAMALETREHFPEDELHITNEIIHNPQVNEMLTTAGVQIIPKEGVGAPKDFSKVKENDVVILPAFGASLEEMQFLDDKGVRVVDATCPWVSKVWNTVDRHQRMDMTSVIHGKWNHEETIATASFCET------------------YLIMKNEDEAKYVANYIVNGGDKAEFLEKFKNAMSEGFDPD 273          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: K9WMB2_9CYAN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=3 Tax=Oscillatoriales TaxID=1150 RepID=K9WMB2_9CYAN)

HSP 1 Score: 264 bits (675), Expect = 4.380e-84
Identity = 128/227 (56.39%), Postives = 161/227 (70.93%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            +  E+ S ++ E + NN R+ RG+ T  LA  +GFCWGVERAVAMA++ARQHFP + + +TNE+IHNP VN++L EM V F+PV G G KD   +  GDVVILPAFGAS++EMQ L+DKN ++VDTTCPWVSKVWNTV+KH K ++TS+IHGK+ HEETVATSSF  K                  YLVV  + EAEYVA Y+ +GGN+ EF+ KF  A S  FDPD
Sbjct:   31 LQSEYQSNLIQEIRSNNYRLQRGEVTILLAEAFGFCWGVERAVAMAYEARQHFPTERIWMTNEIIHNPSVNQRLQEMEVGFIPVQG-GKKDFSVVDSGDVVILPAFGASVQEMQLLNDKNCKIVDTTCPWVSKVWNTVEKHKKKDYTSIIHGKYKHEETVATSSFAGK------------------YLVVLNLKEAEYVADYILHGGNRDEFMTKFSRACSSGFDPD 238          
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Match: A0A6P0LTG3_9CYAN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase (Fragment) n=1 Tax=Moorena sp. SIO3G5 TaxID=2607837 RepID=A0A6P0LTG3_9CYAN)

HSP 1 Score: 260 bits (665), Expect = 6.890e-84
Identity = 125/227 (55.07%), Postives = 164/227 (72.25%), Query Frame = 0
Query:    1 MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQARQHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDVVILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVIHGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVASYMANGGNKAEFIEKFKNAMSENFDPD 227
            +  E+ S ++ + + NN R+ +GD T RLA  +GFCWGVERAVAMA++ R HFP++ + ITNE+IHNP VN++L EM V F+ V  DG KD   +  GDVVILPAFGAS++EMQ L +K+ ++VDTTCPWVSKVWNTV+KH K E+TS+IHGK+ HEETVATSSF  K                  YLV+  + +AEYVA+Y+ NGGN+ EF++KFKNA+S  FDP+
Sbjct:   31 LESEYQSSLIEQIRANNYRLQQGDVTIRLAEAFGFCWGVERAVAMAYETRTHFPNEQIWITNEIIHNPSVNQRLREMSVGFIAVE-DGKKDFSVVGAGDVVILPAFGASVQEMQLLHEKDCKIVDTTCPWVSKVWNTVEKHKKKEYTSIIHGKYKHEETVATSSFAGK------------------YLVLLNLQQAEYVANYILNGGNRDEFLDKFKNAISVGFDPE 238          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9698.22336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGB8_ECTSI1.880e-12380.264-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
A0A835ZE64_9STRA6.190e-9964.324-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
A0A7S3YXS9_9EUKA5.520e-8958.59Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
L1JFG8_GUITC3.540e-8858.154-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
W7TLS9_9STRA1.310e-8657.274-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
A0A7S0MIF1_9CRYP8.030e-8657.27Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
UPI0016805B9D2.800e-8556.394-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
A0A6U4E9P0_9STRA5.310e-8557.89Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K9WMB2_9CYAN4.380e-8456.394-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
A0A6P0LTG3_9CYAN6.890e-8455.074-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0034514-hydroxy-3-methylbut-2-enyl diphosphate reductasePFAMPF02401LYTBcoord: 29..168
e-value: 3.3E-39
score: 134.8
NoneNo IPR availableGENE3D3.40.50.11270coord: 36..151
e-value: 2.2E-21
score: 77.7
NoneNo IPR availablePANTHERPTHR31619FAMILY NOT NAMEDcoord: 1..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9698contigM-pyrifera_M_contig9698:6817..10869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9698.22336.1mRNA_M-pyrifera_M_contig9698.22336.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9698 6796..10869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9698.22336.1 ID=prot_M-pyrifera_M_contig9698.22336.1|Name=mRNA_M-pyrifera_M_contig9698.22336.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp
MSDEFTSKIVAEFKENNGRITRGDTTFRLATDYGFCWGVERAVAMAFQAR
QHFPDQTMHITNELIHNPGVNEKLDEMGVNFVPVSGDGMKDLKSIKDGDV
VILPAFGASLEEMQTLDDKNVQVVDTTCPWVSKVWNTVDKHTKAEFTSVI
HGKWAHEETVATSSFCEKASPPPRLHACMRCKPYPPYLVVKTMAEAEYVA
SYMANGGNKAEFIEKFKNAMSENFDPD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003451LytB/IspH