prot_M-pyrifera_M_contig96972.22334.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96972.22334.1
Unique Nameprot_M-pyrifera_M_contig96972.22334.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: A0A061RNH1_9CHLO (Large subunit ribosomal protein L39e n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RNH1_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 3.730e-17
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKLRI 51
            MPS KTFRTK+TLAK++RQNRP+P WIR R  N +RYN KRRHWRRTKL I
Sbjct:   22 MPSHKTFRTKRTLAKKQRQNRPIPQWIRFRTNNKIRYNAKRRHWRRTKLGI 72          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: A0A835YZW6_9STRA (Ribosomal protein L39e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW6_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.480e-17
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKL 49
            MPS KTFRTK+TLA + +QNRP+PNWIR R  NT+RYN KRRHWRRTKL
Sbjct:    1 MPSHKTFRTKRTLAVKLKQNRPIPNWIRLRTDNTIRYNAKRRHWRRTKL 49          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: K0TLV9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLV9_THAOC)

HSP 1 Score: 76.6 bits (187), Expect = 5.350e-17
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    2 PSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKL 49
            PSQKTFRTK+TLAK++RQNRP+P WIR R  NTV+YN KRRHWRRTKL
Sbjct:   50 PSQKTFRTKRTLAKKQRQNRPLPQWIRLRTDNTVKYNAKRRHWRRTKL 97          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: Q5I7K7_WHEAT (Ribosomal protein L39 n=5 Tax=Triticeae TaxID=147389 RepID=Q5I7K7_WHEAT)

HSP 1 Score: 75.1 bits (183), Expect = 6.370e-17
Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKL 49
            MPS KTFR KQ LAK++RQNRP+P WIR R  NT+RYN KRRHWRRTKL
Sbjct:    1 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: UPI001BFD99F9 (60S ribosomal protein L39 n=1 Tax=Staphylococcus aureus TaxID=1280 RepID=UPI001BFD99F9)

HSP 1 Score: 75.1 bits (183), Expect = 9.180e-17
Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKL 49
            MPS KTFR KQ LAK++RQNRP+P WIR R  NT+RYN KRRHWRRTKL
Sbjct:   16 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 64          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: A0A453QYH8_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453QYH8_AEGTS)

HSP 1 Score: 75.1 bits (183), Expect = 1.020e-16
Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKL 49
            MPS KTFR KQ LAK++RQNRP+P WIR R  NT+RYN KRRHWRRTKL
Sbjct:   20 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 68          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: B8BVE4_THAPS (RL39, ribosomal protein 39 60S large ribosomal subunit (Fragment) n=4 Tax=Bacillariophyta TaxID=2836 RepID=B8BVE4_THAPS)

HSP 1 Score: 74.3 bits (181), Expect = 1.260e-16
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    2 PSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKL 49
            PSQKTFRTK+TLAK++RQNRP+P WIR R   TV+YN KRRHWRRTKL
Sbjct:    1 PSQKTFRTKRTLAKKQRQNRPLPQWIRLRTDETVKYNAKRRHWRRTKL 48          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: I1H0E6_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1H0E6_BRADI)

HSP 1 Score: 74.3 bits (181), Expect = 1.290e-16
Identity = 37/49 (75.51%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKL 49
            MPS KTFR KQ LAK+ RQNRP+P WIR R  NT+RYN KRRHWRRTKL
Sbjct:    1 MPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: A0A1E4RWT5_CYBJN (60S ribosomal protein L39 n=1 Tax=Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542) TaxID=983966 RepID=A0A1E4RWT5_CYBJN)

HSP 1 Score: 74.3 bits (181), Expect = 1.290e-16
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKLRI 51
            MPSQK+F+TKQ LAK +R NRP+P WIR R  NTVRYN KRRHWRRTKL I
Sbjct:    1 MPSQKSFKTKQKLAKAQRTNRPLPQWIRLRTNNTVRYNAKRRHWRRTKLNI 51          
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Match: K3WT32_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT32_GLOUD)

HSP 1 Score: 74.7 bits (182), Expect = 1.480e-16
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKL 49
            MPS KTFRTKQ LAK+++QNRP+P WIR R  NT++YN KRRHWRRTKL
Sbjct:    1 MPSHKTFRTKQILAKKQKQNRPIPQWIRLRTGNTIKYNAKRRHWRRTKL 49          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96972.22334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061RNH1_9CHLO3.730e-1774.51Large subunit ribosomal protein L39e n=2 Tax=Tetra... [more]
A0A835YZW6_9STRA4.480e-1775.51Ribosomal protein L39e n=1 Tax=Tribonema minus Tax... [more]
K0TLV9_THAOC5.350e-1779.17Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
Q5I7K7_WHEAT6.370e-1775.51Ribosomal protein L39 n=5 Tax=Triticeae TaxID=1473... [more]
UPI001BFD99F99.180e-1775.5160S ribosomal protein L39 n=1 Tax=Staphylococcus a... [more]
A0A453QYH8_AEGTS1.020e-1675.51Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
B8BVE4_THAPS1.260e-1677.08RL39, ribosomal protein 39 60S large ribosomal sub... [more]
I1H0E6_BRADI1.290e-1675.51Uncharacterized protein n=2 Tax=Brachypodium dista... [more]
A0A1E4RWT5_CYBJN1.290e-1674.5160S ribosomal protein L39 n=1 Tax=Cyberlindnera ja... [more]
K3WT32_GLOUD1.480e-1673.47Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023626Ribosomal protein L39e domain superfamilyGENE3D1.10.1620.10coord: 1..51
e-value: 7.0E-25
score: 88.6
IPR023626Ribosomal protein L39e domain superfamilySUPERFAMILY48662Ribosomal protein L39ecoord: 3..50
IPR000077Ribosomal protein L39ePFAMPF00832Ribosomal_L39coord: 9..49
e-value: 1.7E-16
score: 59.5
IPR000077Ribosomal protein L39ePANTHERPTHR19970RIBOSOMAL PROTEIN L39Ecoord: 1..49
NoneNo IPR availablePANTHERPTHR19970:SF24coord: 1..49
NoneNo IPR availablePRODOMPD007914coord: 1..37
e-value: 5.0E-9
score: 139.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96972contigM-pyrifera_M_contig96972:227..382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96972.22334.1mRNA_M-pyrifera_M_contig96972.22334.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96972 227..388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96972.22334.1 ID=prot_M-pyrifera_M_contig96972.22334.1|Name=mRNA_M-pyrifera_M_contig96972.22334.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
MPSQKTFRTKQTLAKRRRQNRPVPNWIRQRATNTVRYNNKRRHWRRTKLR
I*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023626Ribosomal_L39e_dom_sf
IPR000077Ribosomal_L39