prot_M-pyrifera_M_contig96960.22328.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96960.22328.1
Unique Nameprot_M-pyrifera_M_contig96960.22328.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length156
Homology
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: A0A7S1CLV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLV3_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.520e-62
Identity = 97/156 (62.18%), Postives = 123/156 (78.85%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            W  SGK+RV+A  L +W  +G RVLLFCQG QML ++  F R + Y++LRMDG+TPVK RA+LV RF  D+ +F+FLLTTRVGG+G+NL  AD V++FDPDWNP TD QA+ER+WR+GQ K V IYRLVTAGTIEEKI+ RQ++K+ L  +VL DP
Sbjct:  369 WQRSGKMRVVAEVLRLWAAQGHRVLLFCQGRQMLDIMGAFVRARGYTHLRMDGTTPVKARASLVARFNADADVFVFLLTTRVGGIGVNLTGADRVLLFDPDWNPTTDIQARERAWRLGQTKAVTIYRLVTAGTIEEKIYHRQIFKQALTDRVLADP 524          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: UPI0005114F5E (DNA excision repair protein ERCC-6 n=1 Tax=Pelecanus crispus TaxID=36300 RepID=UPI0005114F5E)

HSP 1 Score: 203 bits (517), Expect = 3.940e-60
Identity = 93/156 (59.62%), Postives = 120/156 (76.92%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            W  SGK+ V+ + L +W  +G RVL F Q  QML +LE F R +NYSYLRMDG+T +  R  L+ R+  D SIF+FLLTTRVGG+G+NL  AD V+I+DPDWNP+TD QA+ER+WRIGQKK+V +YRL+TAGTIEEKI+ RQ++K+ L  +VL DP
Sbjct:   42 WKRSGKMVVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRHRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 197          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: A0A2P4SU19_BAMTH (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Bambusicola thoracicus TaxID=9083 RepID=A0A2P4SU19_BAMTH)

HSP 1 Score: 204 bits (519), Expect = 2.950e-59
Identity = 93/156 (59.62%), Postives = 121/156 (77.56%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            W  SGK+ V+ + L +W  +G RVL F Q  QML +LE F R++NYSYLRMDG+T +  R  L+ R+  D SIF+FLLTTRVGG+G+NL  AD V+I+DPDWNP+TD QA+ER+WRIGQKK+V +YRL+TAGTIEEKI+ RQ++K+ L  +VL DP
Sbjct:   74 WKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 229          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: A0A0T6B4K1_9SCAR (Helicase n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6B4K1_9SCAR)

HSP 1 Score: 200 bits (509), Expect = 3.060e-59
Identity = 93/156 (59.62%), Postives = 123/156 (78.85%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            +  SGK+ V++A L +WK +  RVLLF QG  M+ LLE+F  +Q Y YL+MDGST VK R +L+  F  D+S  +FLLTTRVGG+G+NL  A+ V+I+DPDWNPATD QA+ER+WRIGQ+K+V IYRLV+AGTIEEK++QRQVWK+ L  ++L+DP
Sbjct:   44 YKKSGKMIVVSALLKIWKKQNHRVLLFTQGRAMVGLLEKFLTQQEYKYLKMDGSTGVKSRQSLIKSFNEDTSYDVFLLTTRVGGLGVNLTGANRVIIYDPDWNPATDTQARERAWRIGQEKQVTIYRLVSAGTIEEKMYQRQVWKQLLSNKILLDP 199          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: UPI000529D259 (DNA excision repair protein ERCC-6 n=1 Tax=Colius striatus TaxID=57412 RepID=UPI000529D259)

HSP 1 Score: 204 bits (519), Expect = 3.200e-59
Identity = 93/156 (59.62%), Postives = 121/156 (77.56%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            W  SGK+ V+ + L +W  +G RVL F Q  QML +LE F R++NYSYLRMDG+T +  R  L+ R+  D SIF+FLLTTRVGG+G+NL  AD V+I+DPDWNP+TD QA+ER+WRIGQKK+V +YRL+TAGTIEEKI+ RQ++K+ L  +VL DP
Sbjct:   42 WKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 197          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: A0A093HJK3_STRCA (DNA excision repair protein ERCC-6 n=4 Tax=Struthio camelus australis TaxID=441894 RepID=A0A093HJK3_STRCA)

HSP 1 Score: 207 bits (527), Expect = 4.690e-59
Identity = 95/156 (60.90%), Postives = 122/156 (78.21%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            W  SGK+ V+ + L +W  +G RVLLF Q  QML +LE F RE+NYSYLRMDG+T +  R  L+ R+  D SIF+FLLTTRVGG+G+NL  AD V+I+DPDWNP+TD QA+ER+WRIGQKK+V +YRL+TAGTIEEKI+ RQ++K+ L  +VL DP
Sbjct:  847 WKRSGKMIVVESLLKIWHKQGHRVLLFTQSRQMLQILEVFVRERNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGINLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 1002          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: A0A7K5EX63_PROAR (ERCC6 protein (Fragment) n=2 Tax=Psittaciformes TaxID=9223 RepID=A0A7K5EX63_PROAR)

HSP 1 Score: 206 bits (523), Expect = 5.890e-59
Identity = 95/156 (60.90%), Postives = 120/156 (76.92%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            W  SGK+ V+ + L +W  +G RVL F Q  QML +LE F RE+NYSYLRMDGST +  R  L+ R+  D SIF+FLLTTRVGG+G+NL  AD V+I+DPDWNP+TD QA+ER+WRIGQKK V +YRL+TAGTIEEKI+ RQ++K+ L  +VL DP
Sbjct:  229 WKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRERNYSYLRMDGSTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKHVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 384          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: A0A6J2XV65_SITOR (DNA excision repair protein ERCC-6-like n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2XV65_SITOR)

HSP 1 Score: 206 bits (524), Expect = 8.040e-59
Identity = 93/153 (60.78%), Postives = 122/153 (79.74%), Query Frame = 0
Query:    4 SGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            SGK+ V++A L +WK +G R LLFCQG  M+ L E F  +QNY YL+MDGST +  R +L+ +F  DSS  +FLLTTRVGG+G+NL  A+ V+I+DPDWNPATDAQA+ER+WRIGQ K V +YRL++AGT+EEK++QRQVWK+ L ++VLVDP
Sbjct:  554 SGKMVVVSALLKIWKKQGHRTLLFCQGRSMIKLFELFLSQQNYKYLKMDGSTTICSRQSLIDKFNTDSSFEVFLLTTRVGGLGVNLTGANRVIIYDPDWNPATDAQARERAWRIGQDKSVTVYRLISAGTVEEKMYQRQVWKQLLSKKVLVDP 706          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: A0A7K5YAN4_9AVES (ERCC6 protein (Fragment) n=1 Tax=Pterocles burchelli TaxID=2585816 RepID=A0A7K5YAN4_9AVES)

HSP 1 Score: 206 bits (524), Expect = 1.190e-58
Identity = 95/156 (60.90%), Postives = 121/156 (77.56%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            W  SGK+ V+ + L +W  +G RVLLF Q  QML +LE F R++NYSYLRMDG+T +  R  L+ RF  D SIF+FLLTTRVGG+G+NL  AD V+I+DPDWNP+TD QA+ER+WRIGQKK V +YRL+TAGTIEEKI+ RQ++K+ L  +VL DP
Sbjct:  829 WKRSGKMIVVESLLKIWHKQGHRVLLFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRFNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKHVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 984          
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Match: A0A7K9XHD2_9GRUI (ERCC6 protein (Fragment) n=1 Tax=Psophia crepitans TaxID=54359 RepID=A0A7K9XHD2_9GRUI)

HSP 1 Score: 206 bits (524), Expect = 1.190e-58
Identity = 95/156 (60.90%), Postives = 122/156 (78.21%), Query Frame = 0
Query:    1 WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLRMDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDPDWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRRQVLVDP 156
            W  SGK+ V+ + L +W  +G RVLLF Q  QML +LE F R++NYSYLRMDG+T +  R  LV R+  D SIF+FLLTTRVGG+G+NL  AD V+I+DPDWNP+TD QA+ER+WRIGQKK+V +YRL+TAGTIEEKI+ RQ++K+ L  +VL DP
Sbjct:  839 WKRSGKMIVVESLLKIWHKQGHRVLLFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLVTRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 994          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96960.22328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CLV3_9STRA1.520e-6262.18Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
UPI0005114F5E3.940e-6059.62DNA excision repair protein ERCC-6 n=1 Tax=Pelecan... [more]
A0A2P4SU19_BAMTH2.950e-5959.62Helicase C-terminal domain-containing protein (Fra... [more]
A0A0T6B4K1_9SCAR3.060e-5959.62Helicase n=1 Tax=Oryctes borbonicus TaxID=1629725 ... [more]
UPI000529D2593.200e-5959.62DNA excision repair protein ERCC-6 n=1 Tax=Colius ... [more]
A0A093HJK3_STRCA4.690e-5960.90DNA excision repair protein ERCC-6 n=4 Tax=Struthi... [more]
A0A7K5EX63_PROAR5.890e-5960.90ERCC6 protein (Fragment) n=2 Tax=Psittaciformes Ta... [more]
A0A6J2XV65_SITOR8.040e-5960.78DNA excision repair protein ERCC-6-like n=1 Tax=Si... [more]
A0A7K5YAN4_9AVES1.190e-5860.90ERCC6 protein (Fragment) n=1 Tax=Pterocles burchel... [more]
A0A7K9XHD2_9GRUI1.190e-5860.90ERCC6 protein (Fragment) n=1 Tax=Psophia crepitans... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 35..118
e-value: 2.0E-20
score: 83.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 9..118
e-value: 1.5E-18
score: 67.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 9..156
score: 17.022
NoneNo IPR availableGENE3D3.40.50.300coord: 1..156
e-value: 1.9E-68
score: 232.7
NoneNo IPR availablePANTHERPTHR45629:SF5DNA EXCISION REPAIR PROTEIN ERCC-6coord: 1..156
NoneNo IPR availablePANTHERPTHR45629FAMILY NOT NAMEDcoord: 1..156
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96960contigM-pyrifera_M_contig96960:235..702 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96960.22328.1mRNA_M-pyrifera_M_contig96960.22328.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96960 235..702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96960.22328.1 ID=prot_M-pyrifera_M_contig96960.22328.1|Name=mRNA_M-pyrifera_M_contig96960.22328.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
WADSGKLRVLAAALHVWKPKGRRVLLFCQGTQMLSLLEQFAREQNYSYLR
MDGSTPVKRRAALVHRFQNDSSIFLFLLTTRVGGVGLNLVAADTVVIFDP
DWNPATDAQAKERSWRIGQKKKVVIYRLVTAGTIEEKIWQRQVWKETLRR
QVLVDP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase