prot_M-pyrifera_M_contig96951.22326.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96951.22326.1
Unique Nameprot_M-pyrifera_M_contig96951.22326.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A158RXL7_9SPHN (Pectate_lyase_3 domain-containing protein n=1 Tax=Novosphingobium sp. KN65.2 TaxID=1478134 RepID=A0A158RXL7_9SPHN)

HSP 1 Score: 56.2 bits (134), Expect = 5.940e-7
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   27 INVLDSPYNTPNNGKDDATPALQRVMAAISHTGGVVYFPPGEYRVYSKVNVVGNGIMLRGAGGQATKVLANSTAFG 102
            ++V D+PYN   +   D T A+   + A+S TGG++YFPPG Y++ S + +  + I L GAG + T ++  S A G
Sbjct:  128 VSVKDAPYNAKGDNSTDDTSAINSAITAVSATGGILYFPPGIYKISSALTIT-SPIYLVGAGMKNT-IIRQSNASG 201          
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A146G8Y3_TERSA (Pectate lyase superfamily protein n=2 Tax=Terrimicrobium sacchariphilum TaxID=690879 RepID=A0A146G8Y3_TERSA)

HSP 1 Score: 54.3 bits (129), Expect = 2.770e-6
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0
Query:   27 INVLDSPYNTPNNGKDDATPALQRVM-AAISHTGGVVYFPPGEYRVYSKVN------VVGNGIMLRGAGGQATKVLANS 98
            I+V  +PY    +GK D+T ++Q  + AA++  GG+V+ PPG YRV    N      V G+ I+LRGAG   T +  +S
Sbjct:   84 IDVTAAPYKADPSGKTDSTASIQSALDAAMAAGGGIVFLPPGTYRVSPPENQKVVLRVEGDNIVLRGAGADKTHIFNDS 162          
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A3D1K6J0_9BACT (Pectate_lyase_3 domain-containing protein n=2 Tax=Lentisphaerae TaxID=256845 RepID=A0A3D1K6J0_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 2.780e-6
Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 0
Query:   27 INVLDSPYNTPNNGKDDATPALQRVMAAISHTGG-VVYFPPGEYRVYSKVNVVGNGIMLRGAGGQATKV 94
            I+V   PY    +GK DA PA+Q  + A +  GG +V+ P G YR+ + +    + I+LRGAGG  TK+
Sbjct:   97 IDVSQQPYGAVADGKTDAQPAIQAALDAAAKQGGAIVFLPAGLYRLDNDLRATASKIVLRGAGGDKTKL 165          
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A7W5AZD7_9BACL (Probable pectate lyase C n=1 Tax=Paenibacillus phyllosphaerae TaxID=274593 RepID=A0A7W5AZD7_9BACL)

HSP 1 Score: 53.1 bits (126), Expect = 7.480e-6
Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query:   25 VEINVLDSPYNTPNNGKDDATPALQRVMAAISHTGG-VVYFPPGEYRVYSK------VNVVGNGIMLRGAGGQAT 92
            V ++V ++PY+  N G DD T  +QR +      GG VVY PPG YR+  +      + +  +G++LRGAG + T
Sbjct:  289 VFLDVTEAPYSANNTGADDVTAVIQRALDDAGEAGGGVVYLPPGTYRIKPQATSSESLRISHSGVVLRGAGPEHT 363          
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A7J7QQS9_9CHLO (Pectin lyase fold/virulence factor n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS9_9CHLO)

HSP 1 Score: 52.8 bits (125), Expect = 9.720e-6
Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 0
Query:   12 GVAWGANSSTVGIVEINVLDSPYNTPNNGKDDATPALQRVMAAISHTGGVVYFPPGEYRVYSKVNVVGNGIMLRGAGGQATKV 94
            G A G  S     V+ +V  + +    +GK D T A+Q  +AA  + GGV+YFPPG Y++ +++ +  N + LRGAG   TK+
Sbjct:   78 GFAAGLQSIPSNPVKFDVK-AKFGAKGDGKADDTKAVQAALAATKNAGGVLYFPPGTYKLSAQLTLDSNQV-LRGAGRDRTKL 158          
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A383VTN9_TETOB (Pectate_lyase_3 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VTN9_TETOB)

HSP 1 Score: 51.6 bits (122), Expect = 2.470e-5
Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 0
Query:   34 YNTPNNGKDDATPALQRVMAAISHTGGVVYFPPGEYRVYSKVNVVGNGIMLRGAGGQATKV 94
            Y    +G  D T A+Q  +AA   +GGV+YFPPG Y++ +++ +  N + LRGAG   TK+
Sbjct:  100 YGAKGDGNTDDTRAIQAALAATKQSGGVLYFPPGTYKLSAQLTLDSNQV-LRGAGRDRTKL 159          
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A2P7TGB2_9SPHI (Pectate_lyase_3 domain-containing protein n=1 Tax=Sphingobacteriales bacterium UPWRP_1 TaxID=2116516 RepID=A0A2P7TGB2_9SPHI)

HSP 1 Score: 50.8 bits (120), Expect = 4.680e-5
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   27 INVLDSPYNTPNNGKDDATPALQRVMAAISHTGGVVYFPPGEYRVYSKVNVVGNGIMLRGAGGQATKVLANSTAFG 102
            +NV+D  Y    N   D  PA+   +AA+    GVVYFP G YR+ S +N+   G++LRG   Q +++L +  + G
Sbjct:   46 VNVMD--YGAAANSVTDDYPAVAAAIAALGGADGVVYFPAGNYRLASGINLP-PGVVLRGESAQTSRLLFDQPSSG 118          
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A6G6XJN7_9CAUD (Tail spike protein n=1 Tax=Gordonia phage Skog TaxID=2704033 RepID=A0A6G6XJN7_9CAUD)

HSP 1 Score: 50.8 bits (120), Expect = 4.710e-5
Identity = 24/62 (38.71%), Postives = 37/62 (59.68%), Query Frame = 0
Query:   23 GIVEINVLDSPYNTPNNGKDDATPALQRVMAAISHTGGVVYFPPGEYRVYSKVNVVGNGIML 84
            G + +N  D+PY    NG  D T ALQ   AA+ + GG+++ PPG+YR+ S +   G  +M+
Sbjct:   58 GDLMVNAKDAPYRAVGNGIVDDTAALQAAAAAVPN-GGILFVPPGDYRISSTITNGGKSLMV 118          
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Match: A0A2P6THF4_CHLSO (Band 7 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THF4_CHLSO)

HSP 1 Score: 50.4 bits (119), Expect = 6.220e-5
Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 0
Query:   25 VEINVLDSPYNTPNNGKDDATPALQRVMAAISHTGGVVYFPPGEYRVYSKVNVVGNGIMLRGAGGQAT 92
            V+ NVLD  +    +   D T AL+  + A +   GVVYFPPG YR+   + V  + ++LRGAG  +T
Sbjct:   78 VKYNVLD--FGAKGDNVTDDTAALEAAIEAANSEPGVVYFPPGVYRLTRPLQVTSSNVVLRGAGESST 143          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96951.22326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A158RXL7_9SPHN5.940e-738.16Pectate_lyase_3 domain-containing protein n=1 Tax=... [more]
A0A146G8Y3_TERSA2.770e-639.24Pectate lyase superfamily protein n=2 Tax=Terrimic... [more]
A0A3D1K6J0_9BACT2.780e-640.58Pectate_lyase_3 domain-containing protein n=2 Tax=... [more]
A0A7W5AZD7_9BACL7.480e-637.33Probable pectate lyase C n=1 Tax=Paenibacillus phy... [more]
A0A7J7QQS9_9CHLO9.720e-637.35Pectin lyase fold/virulence factor n=1 Tax=Scenede... [more]
A0A383VTN9_TETOB2.470e-540.98Pectate_lyase_3 domain-containing protein n=1 Tax=... [more]
A0A2P7TGB2_9SPHI4.680e-536.84Pectate_lyase_3 domain-containing protein n=1 Tax=... [more]
A0A6G6XJN7_9CAUD4.710e-538.71Tail spike protein n=1 Tax=Gordonia phage Skog Tax... [more]
A0A2P6THF4_CHLSO6.220e-539.71Band 7 n=1 Tax=Chlorella sorokiniana TaxID=3076 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024535Pectate lyase superfamily proteinPFAMPF12708Pectate_lyase_3coord: 27..98
e-value: 4.6E-11
score: 43.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 25..105
e-value: 2.0E-11
score: 45.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..105
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.868
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 19..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96951contigM-pyrifera_M_contig96951:360..674 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96951.22326.1mRNA_M-pyrifera_M_contig96951.22326.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96951 354..674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96951.22326.1 ID=prot_M-pyrifera_M_contig96951.22326.1|Name=mRNA_M-pyrifera_M_contig96951.22326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
MIHLLTVFLAVGVAWGANSSTVGIVEINVLDSPYNTPNNGKDDATPALQR
VMAAISHTGGVVYFPPGEYRVYSKVNVVGNGIMLRGAGGQATKVLANSTA
FGVVN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024535Pectate_lyase_SF_prot
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence