prot_M-pyrifera_M_contig96931.22321.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96931.22321.1
Unique Nameprot_M-pyrifera_M_contig96931.22321.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
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BLAST of mRNA_M-pyrifera_M_contig96931.22321.1 vs. uniprot
Match: A0A6B2KYH0_9EUKA (Calpain catalytic domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYH0_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 5.020e-9
Identity = 37/107 (34.58%), Postives = 53/107 (49.53%), Query Frame = 0 
Query:   13 YTIVPCTFSPGIEGRFRLSVCVVQIKDPSASSRMRASKVLQLFPCSNEWRRKAFQGYWLGAFQGGCSNEEATFLANPQFSLTLEETSKVAVTLTQPEQRNVIGFYVF 119
            Y I+  TF P +E  F LSV      DP      + +K   L P  N+W  +   G W     GGCSN +AT++ NPQF L +++     V L     ++ +GFY+F
Sbjct:  511 YNIITTTFHPNLENTFTLSVA--HDCDP------KTTKFFLLTP-QNDWAVQKASGAWGPGKDGGCSNNKATWMQNPQFLLQVDQKVSAKVVLEVNGPKSAVGFYLF 608
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BLAST of mRNA_M-pyrifera_M_contig96931.22321.1 vs. uniprot
Match: A0A8J5XID1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XID1_DIALT)

HSP 1 Score: 51.2 bits (121), Expect = 5.920e-5
Identity = 33/108 (30.56%), Postives = 46/108 (42.59%), Query Frame = 0 
Query:    3 ECVLDKSEQPYTIVPCTFSPGIEGRFRLSVCVVQIKDPSASSRMRASKVLQLFPCS--NEWRRKAFQGYWLGAFQGGCSNEEATFLANPQFSLTLEETSKVAVTLTQP 108
            E  ++ S+ PY I+PCTF PG EG+F L++    + D              L P     +W        W G   GG    + T+  NPQF L     S+V + L  P
Sbjct: 1838 EFTVEPSDAPYVIMPCTFEPGCEGQFSLTIHCDDLDDDGVPD-------FDLLPVGPPRDWFSATVAHAWKGDLAGGARVHD-TWRNNPQFYLIPSARSRVFIFLDLP 1937
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BLAST of mRNA_M-pyrifera_M_contig96931.22321.1 vs. uniprot
Match: UPI001C4B4695 (calpain-6 n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4B4695)

HSP 1 Score: 50.8 bits (120), Expect = 7.510e-5
Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 0 
Query:   54 LFPCSNEWRRKAFQGYW------LGAFQGGCSNEEATFLANPQFSLTLEETS-KVAVTLTQPEQRN----------VIGFYVFK 120
            LF     W +K  +G W      L    GGCSN++ATFL NPQ++  +++   KV V+L Q ++R           VIGF +FK
Sbjct:  348 LFSVHKTWEKKTMRGQWTKNTDPLLNRSGGCSNQKATFLQNPQYAFEVKKVEDKVMVSLQQKDRRIHKKEGTGDNLVIGFEIFK 431
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96931.22321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6B2KYH0_9EUKA5.020e-934.58Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A8J5XID1_DIALT5.920e-530.56Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
UPI001C4B46957.510e-536.90calpain-6 n=1 Tax=Sceloporus undulatus TaxID=8520 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.380coord: 1..39
e-value: 5.2E-5
score: 25.3
NoneNo IPR availableGENE3D2.60.120.380coord: 42..120
e-value: 2.7E-11
score: 45.3
IPR022682Peptidase C2, calpain, large subunit, domain IIIPFAMPF01067Calpain_IIIcoord: 70..120
e-value: 2.9E-7
score: 30.8
IPR036213Calpain large subunit, domain III superfamilySUPERFAMILY49758Calpain large subunit, middle domain (domain III)coord: 61..120
IPR036213Calpain large subunit, domain III superfamilySUPERFAMILY49758Calpain large subunit, middle domain (domain III)coord: 4..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96931contigM-pyrifera_M_contig96931:60..419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96931.22321.1mRNA_M-pyrifera_M_contig96931.22321.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96931 60..419 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96931.22321.1 ID=prot_M-pyrifera_M_contig96931.22321.1|Name=mRNA_M-pyrifera_M_contig96931.22321.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MAECVLDKSEQPYTIVPCTFSPGIEGRFRLSVCVVQIKDPSASSRMRASK
VLQLFPCSNEWRRKAFQGYWLGAFQGGCSNEEATFLANPQFSLTLEETSK
VAVTLTQPEQRNVIGFYVFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022682Calpain_domain_III
IPR036213Calpain_III_sf