prot_M-pyrifera_M_contig96804.22291.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96804.22291.1
Unique Nameprot_M-pyrifera_M_contig96804.22291.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length117
Homology
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BLAST of mRNA_M-pyrifera_M_contig96804.22291.1 vs. uniprot
Match: A0A2E7KA44_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KA44_9PLAN)

HSP 1 Score: 191 bits (485), Expect = 3.780e-59
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 
Query:    1 MDDGGTEIMIRDLLFSRPVWQRLSAVLCLIVLCSATSAEAAHHSSYSYQRNPHASSVYSQYRRTHXXXXXXXXXXXXXVSYRPYPPVARSTFYGYGGRRYTYRYRPYSSFA 111
            MDDGGTEIMIRDLLFSRPVWQRLSAVLCLIVLCSATSAEAAH SSYSYQRNPHASSVYSQYRRTHXXXXXXXXXXXXXVSYRPYPPVARSTFYGYGGRRYTYRYRPYSSFA
Sbjct:    1 MDDGGTEIMIRDLLFSRPVWQRLSAVLCLIVLCSATSAEAAHRSSYSYQRNPHASSVYSQYRRTHXXXXXXXXXXXXXVSYRPYPPVARSTFYGYGGRRYTYRYRPYSSFA 111
[Close]
BLAST of mRNA_M-pyrifera_M_contig96804.22291.1 vs. uniprot
Match: A0A518AEX4_9PLAN (Uncharacterized protein n=6 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AEX4_9PLAN)

HSP 1 Score: 119 bits (299), Expect = 4.490e-31
Identity = 77/111 (69.37%), Postives = 84/111 (75.68%), Query Frame = 0 
Query:    1 MDDGGTEIMIRDLLFSRPVWQRLSAVLCLIVLCSATSAEAAHHSSYSYQRNPHASSVYSQYRRTHXXXXXXXXXXXXXVSYRPYPPVARSTFYGYGGRRYTYRYRPYSSFA 111
            MDDGGTEIMIR  LFSR   Q L A+ CL+VL  AT A AAH  S+SY R+P++S          XXXXXXXXXXXX  S+RPYPPVARSTFYGYGGRRYTYRYRPYSSFA
Sbjct:    1 MDDGGTEIMIRGQLFSRHTLQGLCALFCLVVLFGATPAAAAHRGSHSYHRSPYSSXXXXXXXXXXXXXXXXXXXXXXATSWRPYPPVARSTFYGYGGRRYTYRYRPYSSFA 111
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96804.22291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E7KA44_9PLAN3.780e-5999.10Uncharacterized protein n=8 Tax=Gimesia TaxID=1649... [more]
A0A518AEX4_9PLAN4.490e-3169.37Uncharacterized protein n=6 Tax=Gimesia panareensi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 23..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..117
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 34..40
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..40
score: 0.618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96804contigM-pyrifera_M_contig96804:2..352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96804.22291.1mRNA_M-pyrifera_M_contig96804.22291.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96804 2..352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96804.22291.1 ID=prot_M-pyrifera_M_contig96804.22291.1|Name=mRNA_M-pyrifera_M_contig96804.22291.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp
MDDGGTEIMIRDLLFSRPVWQRLSAVLCLIVLCSATSAEAAHHSSYSYQR
NPHASSVYSQYRRTHYNRYGYNGYRYNAVSYRPYPPVARSTFYGYGGRRY
TYRYRPYSSFAYGYRYY
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