prot_M-pyrifera_M_contig96695.22271.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96695.22271.1
Unique Nameprot_M-pyrifera_M_contig96695.22271.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig96695.22271.1 vs. uniprot
Match: A0A520XSS9_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XSS9_9ACTN)

HSP 1 Score: 60.8 bits (146), Expect = 2.750e-8
Identity = 35/109 (32.11%), Postives = 59/109 (54.13%), Query Frame = 0 
Query:   14 LFAGSLMSYQVKDHFQAHYAGRRASFRGTLERLSSFSSDMVFEGR-GTKATIQMPPIMDGSF-AKDVRCVVQLDESAADTLRAQIGKPVTFEGTLVGCDAFMRTVFLAD 120
            L     + Y++   F   Y G++  + GT+E+L  F +D  F    GT+ T+ +  + DG   ++ V+ VV L E A D  R   G P+TF+GTL+  D +MR +++ +
Sbjct:  301 LLGSDRLGYEIDQRFDELYLGKQVRWSGTVEKLRPFRTDRDFGNTPGTRVTLLIGSLGDGRLVSQQVKAVVHLPEDA-DLHR---GDPITFDGTLLRIDRYMRDIYVGN 405
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96695.22271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A520XSS9_9ACTN2.750e-832.11Uncharacterized protein n=2 Tax=Acidimicrobiales b... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96695contigM-pyrifera_M_contig96695:180..560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96695.22271.1mRNA_M-pyrifera_M_contig96695.22271.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96695 180..560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96695.22271.1 ID=prot_M-pyrifera_M_contig96695.22271.1|Name=mRNA_M-pyrifera_M_contig96695.22271.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
STAGFTFEALSEALFAGSLMSYQVKDHFQAHYAGRRASFRGTLERLSSFS
SDMVFEGRGTKATIQMPPIMDGSFAKDVRCVVQLDESAADTLRAQIGKPV
TFEGTLVGCDAFMRTVFLADGGLEGA*
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