prot_M-pyrifera_M_contig96692.22270.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96692.22270.1
Unique Nameprot_M-pyrifera_M_contig96692.22270.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig96692.22270.1 vs. uniprot
Match: W4FXA9_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXA9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.440e-7
Identity = 36/118 (30.51%), Postives = 59/118 (50.00%), Query Frame = 0 
Query:    1 PTFVLDSHSSRLGRWLRVLGFSLFQ---SPHMDRVGLLDEARRRGSIIVTRDARLARSVASLSLRSIHPLPCIYLPAELHSSTKSQLDFLSAALGLEVHADSLMSRCARCNSLGFELL 115
            P F+ DS   R+ +WLR+ G  +     S + ++  +L  A   G I++TRD +LA+  A+ +          Y+ A  H   ++Q   +    G+E H    MSRCA+CN  GF ++
Sbjct:  731 PKFLADSMLGRVAKWLRMTGVDILHWDISVNANKHDMLALATGDGRIVLTRDRKLAQQRAAFAC---------YVVASDH--VEAQFQEIKKHFGIEYHESEFMSRCAKCNQKGFNIV 837
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BLAST of mRNA_M-pyrifera_M_contig96692.22270.1 vs. uniprot
Match: A0A485K5T0_9STRA (Aste57867_1496 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5T0_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.480e-5
Identity = 33/116 (28.45%), Postives = 56/116 (48.28%), Query Frame = 0 
Query:    3 FVLDSHSSRLGRWLRVLGFSLFQSPHM---DRVGLLDEARRRGSIIVTRDARLARSVASLSLRSIHPLPCIYLPAELHSSTKSQLDFLSAALGLEVHADSLMSRCARCNSLGFELL 115
            F+ DS   R+ +WLR+ G  +     M    +  +L  A R   II+TRD ++A+  A+ +        C  + ++   + + Q   +    G+E H    MSRCA+CN  GF ++
Sbjct:  631 FLADSMLGRVAKWLRMTGVDILHWDIMINPKKEDMLALATRENRIILTRDRKMAQQRAAFA--------CYVVASD---NVEEQFQEIKKHFGIEFHEAEFMSRCAKCNGKGFNIV 735
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BLAST of mRNA_M-pyrifera_M_contig96692.22270.1 vs. uniprot
Match: A0A6G0XQF9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQF9_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 7.020e-5
Identity = 33/120 (27.50%), Postives = 58/120 (48.33%), Query Frame = 0 
Query:    1 PTFVLDSHSSRLGRWLRVLGFSLFQ-----SPHMDRVGLLDEARRRGSIIVTRDARLARSVASLSLRSIHPLPCIYLPAELHSSTKSQLDFLSAALGLEVHADSLMSRCARCNSLGFELL 115
            P F+ DS   R+ +WLR+ G  +       +P  D +  L  A  R  II+TRD ++++  A+ +        C  + ++   + ++Q   +    G+E      MSRCA+CN  GF ++
Sbjct:  704 PKFLADSMLGRVSKWLRMTGVDILHWDIVANPRKDEMLALATAENR--IILTRDRKMSQQRAAFA--------CYVVASD---NVEAQFQEIKKHFGIEFDQAEFMSRCAKCNEKGFNVV 810
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96692.22270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
W4FXA9_9STRA1.440e-730.513'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A485K5T0_9STRA1.480e-528.45Aste57867_1496 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0XQF9_9STRA7.020e-527.50Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002782Mut7-C RNAse domainPFAMPF01927Mut7-Ccoord: 2..109
e-value: 2.1E-14
score: 53.9
NoneNo IPR availablePANTHERPTHR39081:SF1coord: 1..114
NoneNo IPR availablePANTHERPTHR39081FAMILY NOT NAMEDcoord: 1..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96692contigM-pyrifera_M_contig96692:336..716 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96692.22270.1mRNA_M-pyrifera_M_contig96692.22270.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96692 336..716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96692.22270.1 ID=prot_M-pyrifera_M_contig96692.22270.1|Name=mRNA_M-pyrifera_M_contig96692.22270.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
PTFVLDSHSSRLGRWLRVLGFSLFQSPHMDRVGLLDEARRRGSIIVTRDA
RLARSVASLSLRSIHPLPCIYLPAELHSSTKSQLDFLSAALGLEVHADSL
MSRCARCNSLGFELLKPPFGDDLKVPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002782Mut7-C_RNAse_dom