prot_M-pyrifera_M_contig95987.22129.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95987.22129.1
Unique Nameprot_M-pyrifera_M_contig95987.22129.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 9.450e-25
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAAH 54
            VDIVVATPGRLLDHL +TPGFTLQHLRYL+IDEADRLLNQSYQGWV KVIKAA+
Sbjct:  355 VDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAY 408          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.500e-22
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAAH 54
            VDI+VATPGRLLDHLE+TPGFTLQHL YLV+DEADRLLNQSYQ WV +V++AA+
Sbjct:  219 VDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAY 272          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: A0A7S4QRG8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QRG8_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 8.690e-22
Identity = 41/53 (77.36%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAA 53
            VD++VATPGRL+DH+EKTPGFTLQHLR+LVIDEADRL+NQSYQ W+ +V++AA
Sbjct:  127 VDVLVATPGRLMDHIEKTPGFTLQHLRFLVIDEADRLVNQSYQNWIGRVMRAA 179          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: A0A7S1XJD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJD5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.120e-21
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAA 53
            VDI+VATPGRL+ HL+ TPGFTLQHL +LV+DEADRLL+QSYQ WV +V+ AA
Sbjct:   30 VDILVATPGRLIHHLDYTPGFTLQHLEFLVVDEADRLLSQSYQNWVRRVLAAA 82          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: B8BZV2_THAPS (Atp-dependent RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZV2_THAPS)

HSP 1 Score: 91.7 bits (226), Expect = 2.410e-20
Identity = 40/54 (74.07%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAAH 54
            VDI+VATPGRL+DHL+ TPGFTLQHLR+LVIDEADRL+NQ YQ WV +V++A++
Sbjct:  134 VDILVATPGRLMDHLDSTPGFTLQHLRFLVIDEADRLVNQPYQNWVGRVLEASN 187          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: A7T2L1_NEMVE (Predicted protein (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7T2L1_NEMVE)

HSP 1 Score: 84.0 bits (206), Expect = 2.590e-20
Identity = 37/52 (71.15%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    2 DIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAA 53
            +I+V TPGRL++H+  TPGFTLQHLR+LVIDEADRLL+QSY  W+ KVI AA
Sbjct:    1 NILVTTPGRLVEHISSTPGFTLQHLRFLVIDEADRLLDQSYNNWLSKVIHAA 52          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: A0A1E7FSJ3_9STRA (DEAD-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSJ3_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.680e-20
Identity = 38/54 (70.37%), Postives = 48/54 (88.89%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAAH 54
            VD++V TPGRL+DHL+ TPGFTLQHLR+LVIDEADRLL+QSY GW+++V+   H
Sbjct:  159 VDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDCVH 212          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: A0A1Y1YIE0_9FUNG (DEAD-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YIE0_9FUNG)

HSP 1 Score: 91.7 bits (226), Expect = 2.690e-20
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAA 53
            VDI++ATPGRL+DHL  TP FTLQHLRYLVIDEADRLLNQSYQ W+  V++AA
Sbjct:  182 VDILIATPGRLIDHLTSTPNFTLQHLRYLVIDEADRLLNQSYQDWLSNVLQAA 234          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: A0A448ZLR2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLR2_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.740e-20
Identity = 38/54 (70.37%), Postives = 48/54 (88.89%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVIKAAH 54
            VD++V TPGRL+DHL+ TPGFTLQHLR+LVIDEADRLL+QSY GW+++V+   H
Sbjct:  381 VDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDCVH 434          
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Match: A0A2D4BV54_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV54_PYTIN)

HSP 1 Score: 90.9 bits (224), Expect = 5.070e-20
Identity = 39/49 (79.59%), Postives = 47/49 (95.92%), Query Frame = 0
Query:    1 VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKV 49
            VDI+VATPGRL+DHLE+TPGFTLQHL++LV+DEADRLLNQSYQ W+ K+
Sbjct:  179 VDILVATPGRLVDHLEQTPGFTLQHLQFLVVDEADRLLNQSYQDWIAKI 227          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95987.22129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSH0_ECTSI9.450e-2590.74DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YS10_9STRA3.500e-2281.48DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4QRG8_9STRA8.690e-2277.36Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1XJD5_9STRA3.120e-2173.58Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
B8BZV2_THAPS2.410e-2074.07Atp-dependent RNA helicase n=1 Tax=Thalassiosira p... [more]
A7T2L1_NEMVE2.590e-2071.15Predicted protein (Fragment) n=2 Tax=Nematostella ... [more]
A0A1E7FSJ3_9STRA2.680e-2070.37DEAD-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A1Y1YIE0_9FUNG2.690e-2077.36DEAD-domain-containing protein n=1 Tax=Basidiobolu... [more]
A0A448ZLR2_9STRA2.740e-2070.37Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A2D4BV54_PYTIN5.070e-2079.59DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..54
e-value: 5.7E-21
score: 76.6
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 3..46
NoneNo IPR availablePANTHERPTHR24031:SF68ATP-DEPENDENT RNA HELICASE DDX51coord: 3..46
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 1..52
e-value: 2.3E-15
score: 56.8
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 30..38
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..54
score: 12.005
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95987contigM-pyrifera_M_contig95987:425..586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95987.22129.1mRNA_M-pyrifera_M_contig95987.22129.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95987 425..586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95987.22129.1 ID=prot_M-pyrifera_M_contig95987.22129.1|Name=mRNA_M-pyrifera_M_contig95987.22129.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
VDIVVATPGRLLDHLEKTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVI
KAAH
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase