prot_M-pyrifera_M_contig95753.22080.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95753.22080.1
Unique Nameprot_M-pyrifera_M_contig95753.22080.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length147
Homology
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BLAST of mRNA_M-pyrifera_M_contig95753.22080.1 vs. uniprot
Match: C4M4P4_ENTHI (Actin-binding protein, cofilin/tropomyosin family n=8 Tax=Entamoeba TaxID=5758 RepID=C4M4P4_ENTHI)

HSP 1 Score: 60.8 bits (146), Expect = 6.690e-9
Identity = 37/94 (39.36%), Postives = 52/94 (55.32%), Query Frame = 0 
Query:    1 GFDFATLSDGFYAEDFTDVVNERSWVVMSLGDDKKTVQVDAEGSGGLDEIKAVLKEDAMQFAAFRVNVVDRSGARASLRCRTVFVEWVGGEVSR 94
            GFD + ++ G  AE   D   E  +VV  +      + VDA+G GGL+E+KA LKEDA+QFA +R      SG   S R + VF+ W G  + +
Sbjct:    3 GFDLSEVA-GPVAEVIDDKNEEVEFVVFGVQTQPNKLVVDAKGKGGLEEVKAALKEDALQFAYYRTI----SGDEESKRVKFVFISWAGEGIKK 91
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BLAST of mRNA_M-pyrifera_M_contig95753.22080.1 vs. uniprot
Match: UPI0002C3D220 (coactosin, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=UPI0002C3D220)

HSP 1 Score: 55.1 bits (131), Expect = 1.070e-6
Identity = 44/147 (29.93%), Postives = 72/147 (48.98%), Query Frame = 0 
Query:    7 LSDGFYAEDFTDVVNERS----WVVMSLGDDKKTVQVDAEGSGGLDEIKAVLKEDAMQFAAFRVNVVDRSGARASLRCRTVFVEWVGGEVSRAEQFKYNNARAAFEEYFSDSQLTLKLNGRAELDS----ELTEENIQKEIRRLAGA 145
            +SD   A+   +V+++++    +VV ++      V    +G GGL+E+KA LK++ +QFA +R      SG   S R + VFV W G      E  K    RAA      + + TL  N   E+ +    +L EE I  ++++  GA
Sbjct:    5 MSDPELAQSIAEVIDDKNEEVEYVVFNVSTAPNKVNFQIKGKGGLNEVKAALKDEELQFAYYRTI----SGDEESKRVKFVFVSWAG------EGIKKPKLRAAMSILKGEVKDTLFKNFHIEIHATCQDDLKEEEIAAKLKKAGGA 141
[Close]
BLAST of mRNA_M-pyrifera_M_contig95753.22080.1 vs. uniprot
Match: A0A0A1U572_ENTIV (Coactosin, putative n=2 Tax=Entamoeba invadens TaxID=33085 RepID=A0A0A1U572_ENTIV)

HSP 1 Score: 54.7 bits (130), Expect = 1.490e-6
Identity = 47/152 (30.92%), Postives = 72/152 (47.37%), Query Frame = 0 
Query:    1 GFDFATLSDGFYAEDFTDVV---NERSWVVMSLGDDKKTVQVDAEGSGGLDEIKAVLKEDAMQFAAFRVNVVDRSGARASLRCRTVFVEWVGGEVSRAEQFKYNNARAAFEEYFSDSQLTLKLNGRAELDS----ELTEENIQKEIRRLAGA 145
            GFD   L+D    +   DV+   NE ++VV +       + ++ +G GGL E+KA+LK+D +QFA +R      SG   S R + V + W G      E  K    RA       D +  L  N   E+ +    +L EE I K++++  GA
Sbjct:    3 GFD---LTDAEIVQAIADVIDDKNETTYVVFTAHAQPNKLVLEGKGVGGLTEVKALLKDDQLQFAYYRTI----SGDEESHRVKFVLICWAG------EGIKKPKLRAVMSVLKGDVKNNLVKNFHIEIHATNQDDLVEEEINKKLKKAGGA 141
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95753.22080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
C4M4P4_ENTHI6.690e-939.36Actin-binding protein, cofilin/tropomyosin family ... [more]
UPI0002C3D2201.070e-629.93coactosin, putative n=1 Tax=Entamoeba invadens IP1... [more]
A0A0A1U572_ENTIV1.490e-630.92Coactosin, putative n=2 Tax=Entamoeba invadens Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 12..147
e-value: 1.0E-20
score: 75.7
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 15..137
e-value: 1.1E-12
score: 47.8
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 1..136
score: 15.865
NoneNo IPR availablePANTHERPTHR10829CORTACTIN AND DREBRINcoord: 18..146
NoneNo IPR availablePANTHERPTHR10829:SF20coord: 18..146
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 16..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95753contigM-pyrifera_M_contig95753:237..677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95753.22080.1mRNA_M-pyrifera_M_contig95753.22080.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95753 237..677 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95753.22080.1 ID=prot_M-pyrifera_M_contig95753.22080.1|Name=mRNA_M-pyrifera_M_contig95753.22080.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp
GFDFATLSDGFYAEDFTDVVNERSWVVMSLGDDKKTVQVDAEGSGGLDEI
KAVLKEDAMQFAAFRVNVVDRSGARASLRCRTVFVEWVGGEVSRAEQFKY
NNARAAFEEYFSDSQLTLKLNGRAELDSELTEENIQKEIRRLAGAHQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR002108ADF-H