prot_M-pyrifera_M_contig9571.22071.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig9571.22071.1
Unique Name	prot_M-pyrifera_M_contig9571.22071.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	241

Homology

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BLAST of mRNA_M-pyrifera_M_contig9571.22071.1 vs. uniprot
Match: D8LNG2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG2_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.620e-82
Identity = 145/250 (58.00%), Postives = 176/250 (70.40%), Query Frame = 0

Query:    1 LANVLDLLRNKQEL-WDRLYMRAVISDSHRWQLGWRLEDLTRQATNQRARLATMIKTLEQ--LPPRPHGP--TLPLAAKMAA-WVQGGQEGGXXXXXXXXXXXXXMEEGGVPQALRLARVLVQEEDLNRMVSLECAARPQLYVQVGMHAMVASSDETCKVFSASPTLDPHALFEKFDLGEGRFALRAFSNQLFLRVVPPDAA---SDWSYWALEFGAPEVGLPEMFQMRDGMVYSEVMHGYLTCSGQGPE 241
            L NV+   R   EL WD+LYMRAV+ D   W LGWRLEDL +Q  NQRAR+A +++TL+   LP   H    ++P AAK AA WV G     X             E GGV +A+  ++V  +EE+LNR+V++ CA RP +YVQVGMH MVAS++  CKV+SA+ +LDPHALFEK +LGEGRFALRAFSN+ FLRVVPP      SDW+ WALE GAPEVGLPE+FQMRDGMVYSEVMHGYL+CSG G E
Sbjct:   22 LVNVMKNRRISGELRWDKLYMRAVVDDEEHWNLGWRLEDLAKQTLNQRARMAVLLETLKNTPLPDLKHSGVFSIPKAAKAAAAWVGGXXX--XTGDGAPRGAEGEEEGGGVSRAVSFSKVFAEEENLNRVVAISCATRPNVYVQVGMHPMVASAEAGCKVYSAATSLDPHALFEKIELGEGRFALRAFSNRRFLRVVPPPPTTGWSDWTVWALEVGAPEVGLPEVFQMRDGMVYSEVMHGYLSCSGAGAE 269

[Close]

BLAST of mRNA_M-pyrifera_M_contig9571.22071.1 vs. uniprot
Match: A0A6H5JLE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE1_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.660e-60
Identity = 118/247 (47.77%), Postives = 148/247 (59.92%), Query Frame = 0

Query:    1 LANVLDLLRNKQEL-WDRLYMRAVISDSHRWQLGWRLEDLTRQATNQRARLATMIKTLEQ--LPPRPHGP--TLPLAAKMAA-WVQGGQEGGXXXXXXXXXXXXXMEEGGVPQALRLARVLVQEEDLNRMVSLECAARPQLYVQVGMHAMVASSDETCKVFSASPTLDPHALFEKFDLGEGRFALRAFSNQLFLRVVPPDAASDWSYWALEFGAPEVGLPEMFQMRDGMVYSEVMHGYLTCSGQGPE 241
            L NV+   R   EL WD+LYM AV+ D   W LGWRLEDL +Q  NQRAR+A +++TL+   +P   H    ++P AAK AA WV+GG  GG              E GGV +A+  ++V  +EEDLNR+V++ CA RP +YVQVGMH MVAS++  CKV+SA+ +LDPHALFEK                                     GAPE+GLPE+FQMRDGMVYSEVMHGYL+CSG G E
Sbjct:  101 LVNVMKNRRISGELRWDKLYMHAVVDDEEHWNLGWRLEDLAKQTLNQRARMAVLLETLKSTPVPDVKHSSVFSIPKAAKAAAAWVRGG--GGGTAEGAPGEAEGEDEGGGVSRAVSFSKVFSEEEDLNRVVAISCATRPNVYVQVGMHPMVASAEAGCKVYSAATSLDPHALFEKV------------------------------------GAPEIGLPEVFQMRDGMVYSEVMHGYLSCSGAGAE 309

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig9571.22071.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig9571.22071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LNG2_ECTSI	1.620e-82	58.00	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
A0A6H5JLE1_9PHAE	1.660e-60	47.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..56

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig9571	contig	M-pyrifera_M_contig9571:217..3640 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig9571.22071.1	mRNA_M-pyrifera_M_contig9571.22071.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig9571 217..3640 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig9571.22071.1 ID=prot_M-pyrifera_M_contig9571.22071.1|Name=mRNA_M-pyrifera_M_contig9571.22071.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
LANVLDLLRNKQELWDRLYMRAVISDSHRWQLGWRLEDLTRQATNQRARL
ATMIKTLEQLPPRPHGPTLPLAAKMAAWVQGGQEGGGAGGGKRGQGGGGM
EEGGVPQALRLARVLVQEEDLNRMVSLECAARPQLYVQVGMHAMVASSDE
TCKVFSASPTLDPHALFEKFDLGEGRFALRAFSNQLFLRVVPPDAASDWS
YWALEFGAPEVGLPEMFQMRDGMVYSEVMHGYLTCSGQGPE