prot_M-pyrifera_M_contig9567.22059.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9567.22059.1
Unique Nameprot_M-pyrifera_M_contig9567.22059.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length481
Homology
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: D7G9B1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B1_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 1.800e-90
Identity = 177/275 (64.36%), Postives = 205/275 (74.55%), Query Frame = 0
Query:  193 GSDTDEDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIVICALFRLGLGLSLLFAQEFSAFFGGDVLMGSPGPAAV-AVADGMAEDAAGSRGEGAMLPGLQRICWGGWVDLLGDWCGGVSLMIGVMCLGPPSVELALELVAVLKALPVWLERWWTGGQHVTGNVTLSGNPANQ 466
            GSD++E+ PECRVCRGDDEGG RPL HPCRCRGSIKYVHQDCL+EWLRSR  GG  XXXXXXXXXXXXX V   ++ LQ QRCELCREKLVF+ARYR  AP  L   +F RGA+RRATPRL+DA R  LNM MWG+A+P++ C LFRLG+GLSLL AQEFSA F     +G+ G     AVA G         G G  LPGL+R+ WG W+D+LGDWCGGV LMIGVMCLGPP VELALE V ++KALPV LERWW G +     + ++G P N+
Sbjct:   47 GSDSEEE-PECRVCRGDDEGGARPLVHPCRCRGSIKYVHQDCLVEWLRSRG-GGXXXXXXXXXXXXXXXGVPDDASALQAQRCELCREKLVFKARYRPGAPAKLGIYQFVRGAVRRATPRLLDAFRGALNMQMWGLAIPVLYCLLFRLGIGLSLLLAQEFSAIF-----LGAGGXXXXXAVAGG---------GRGVSLPGLERVGWGSWMDILGDWCGGVGLMIGVMCLGPPCVELALEFVNLVKALPVVLERWWLGDED---ELRVAGGPRNE 302          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: A0A6H5LAW9_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAW9_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 3.250e-90
Identity = 174/259 (67.18%), Postives = 198/259 (76.45%), Query Frame = 0
Query:  193 GSDTDEDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIVICALFRLGLGLSLLFAQEFSAFFGGDVLMGSPGPAAVAVADGMAEDAAGSRGEGAMLPGLQRICWGGWVDLLGDWCGGVSLMIGVMCLGPPSVELALELVAVLKALPVWLERWWTGGQ 451
            GSD+DE+ PECRVCRGDDEGG RPL HPCRCRGSIKYVHQDCL+EWLRSR  GG  XXXXXXXXXXXXX V   ++ LQ QRCELCREKLVF+ARYR  AP  L   +F RGA+RRATPRL+DA R  LNM MWG+A+P++ C LFRLG+GLSLL AQEFS  F G+   G  GP + AVA G         G G  LPGL+R+ WG W+D+LGDWCGGV LMIGVMCLGPP VELALE V ++KALP+ LE WW G +
Sbjct:  356 GSDSDEE-PECRVCRGDDEGGARPLVHPCRCRGSIKYVHQDCLVEWLRSRG-GGXXXXXXXXXXXXXXXGVPDDASALQAQRCELCREKLVFKARYRPGAPAKLGVYQFVRGAVRRATPRLLDAFRGALNMQMWGLAIPVLYCLLFRLGIGLSLLLAQEFSVIFLGE---GGGGPPS-AVAGG---------GRGVSLPGLERVGWGSWMDILGDWCGGVGLMIGVMCLGPPCVELALEFVNLVKALPIVLECWWFGDE 599          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: A0A7S1DFR3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DFR3_HEMAN)

HSP 1 Score: 88.2 bits (217), Expect = 4.280e-16
Identity = 51/136 (37.50%), Postives = 67/136 (49.26%), Query Frame = 0
Query:  197 DEDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPI 332
            D +  ECR+CRG  EGG   L HPCRC GSIKYVHQ+CL +WL +R  G                           +RCELC     F   Y  +AP  L  +EFA G ++    R + A+R  L + +W V +P+
Sbjct:   13 DGEEAECRICRGGHEGGA--LLHPCRCAGSIKYVHQECLDQWL-ARSSGAS-------------------------KRCELCHHPFTFSPVYADNAPSRLPTTEFAMGLLKLVAKRTLLAMRTTLVLFLWVVCLPV 120          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: A0A5J4YXG3_PORPP (Putative E3 ubiquitin ligase SUD1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXG3_PORPP)

HSP 1 Score: 90.9 bits (224), Expect = 1.500e-15
Identity = 53/160 (33.12%), Postives = 71/160 (44.38%), Query Frame = 0
Query:  196 TDEDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGG----------------------GVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIV 333
            +DED PECR+CR   E  +RPL HPCRCRGSIKY H+DCL++WL SR   G                      G                  A  +    RCELC     F+  Y  D P  L  +E   G M+RA   +  ++R  +   +W   +P++
Sbjct:   56 SDEDEPECRICRCPAELPSRPLFHPCRCRGSIKYTHEDCLVQWLSSRPVMGLMQAPPLAAAPVLAPEAPEGADGALMPHELDFAQNQHGPNSARNIRTVVRCELCHTPFRFQPIYMQDTPEALPVAELLSGIMQRARSTITTSVRLTIVGFVWLFILPLL 215          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: A0A137PDR4_CONC2 (Zf-C3HC4-domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PDR4_CONC2)

HSP 1 Score: 79.7 bits (195), Expect = 1.190e-13
Identity = 49/143 (34.27%), Postives = 68/143 (47.55%), Query Frame = 0
Query:  197 DEDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIVICALFR 339
            DED+  CRVCRG+     +PL HPC+C GSI+YVHQDCLI+WL   +                             + CELC+ +  F   YR D P  L +   A+G   +    L+  +RA   +++W V +P  I  L R
Sbjct:    2 DEDIEFCRVCRGE-ATDDQPLFHPCKCSGSIRYVHQDCLIQWLNHSRK----------------------------KHCELCKHQFTFTPVYRNDMPENLPYYLIAKGLFFQLISGLILFIRAHFVIIIWLVFLPNFISNLSR 115          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: M2WRH9_GALSU (E3 ubiquitin-protein ligase MARCH6 isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WRH9_GALSU)

HSP 1 Score: 83.6 bits (205), Expect = 2.740e-13
Identity = 51/142 (35.92%), Postives = 67/142 (47.18%), Query Frame = 0
Query:  198 EDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIVICALFR 339
            ED PECR+CRG +E   RPL HPCRC GSIKY+H+DCL++WL                              ++ +RCELC     F   Y+ D+P  L+F E   G +           R  +  L+W  AVP+V    FR
Sbjct:    6 EDEPECRICRGTNEPD-RPLFHPCRCSGSIKYIHEDCLVQWLSE----------------------------MRSERCELCGSTFRFIPVYKQDSPSRLSFFELLSGVVSFLLETGSLFGRLCVACLVWLCAVPLVSSMTFR 118          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: A0A7S1XCM2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCM2_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 3.810e-13
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 0
Query:  196 TDEDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIVICALFR 339
            T+ED  ECR+CRG +E   R L  PC+C GSI+Y+H+DCL+ WL   +                              RCELC  +  F   YR+DAP +L+ +EFA G + R        +R      +W + +P+  C  +R
Sbjct:   24 TEEDENECRICRGTEEEDRR-LFFPCKCSGSIRYIHEDCLVRWLSQSRSN----------------------------RCELCGHEFKFEPVYRSDAPSVLSATEFALGILARLRKTAYSLVRVATAGFVWLLCLPLGTCWTWR 138          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: A0A1I8ISM1_9PLAT (RING-CH-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8ISM1_9PLAT)

HSP 1 Score: 79.7 bits (195), Expect = 9.370e-13
Identity = 50/148 (33.78%), Postives = 68/148 (45.95%), Query Frame = 0
Query:  193 GSDTDEDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIVICALFRL 340
            GS  D+D   CRVCR +  G  RPL +PC C G+IKY+HQDCL++WL+                            V + + CELC  K  F+  Y  D P  L  ++  R  +  A   L       L    W +AVP++ C L+RL
Sbjct:   47 GSAADDDANICRVCRME-AGQDRPLFYPCICTGTIKYIHQDCLLQWLQ----------------------------VSRREFCELCGHKYKFKPIYAPDMPSRLPLADILRSLLASAGRGLAFWFHYSLVTCSWLIAVPLLTCRLYRL 165          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: A0A1X6NVZ3_PORUM (RING-CH-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVZ3_PORUM)

HSP 1 Score: 82.0 bits (201), Expect = 1.100e-12
Identity = 53/142 (37.32%), Postives = 61/142 (42.96%), Query Frame = 0
Query:  194 SDTDEDVPECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIVIC 335
            +D D   PECR+CRG  E G RPL HPCRC GSIK+ H+DCL  WL   +                               CELC    VF   Y    P  L  +E   GA RRA      A RA L    W VA+P+  C
Sbjct:  192 ADGDAGAPECRICRGGAEPG-RPLFHPCRCAGSIKFTHEDCLGRWLAQSRTAD----------------------------CELCHTAFVFEPLYADHTPSTLPVAELLTGAARRAGAGGRRAGRAALVAGAWLVALPLGTC 304          
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Match: A0A2R5GV60_9STRA (E3 ubiquitin-protein ligase MARCH6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV60_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.140e-12
Identity = 55/148 (37.16%), Postives = 71/148 (47.97%), Query Frame = 0
Query:  194 SDTDEDVPECRVCR-GDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVXXXXXXXXXXXXXXVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSEFARGAMRRATPRLMDALRAGLNMLMWGVAVPIVICALFRL 340
            S++ ED   CR+CR G +E   RPL HPC C GSIK+VH+DCL+EWL                          ASA      CELC  K  F   Y   AP+ L  +EF R ++ R    L    R  +  + WGV +PI  C +FR+
Sbjct:  612 SESLEDEEICRICRCGVEE--KRPLYHPCVCAGSIKFVHEDCLMEWLSHS-----------------------ASATGSRPNCELCGHKFRFTPVYEPGAPQSLTVAEFLRLSIVRGMRTLPFIGRIIVVAITWGVFIPIATCVMFRI 734          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9567.22059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9B1_ECTSI1.800e-9064.36RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5LAW9_9PHAE3.250e-9067.18RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A7S1DFR3_HEMAN4.280e-1637.50Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A5J4YXG3_PORPP1.500e-1533.13Putative E3 ubiquitin ligase SUD1 n=1 Tax=Porphyri... [more]
A0A137PDR4_CONC21.190e-1334.27Zf-C3HC4-domain-containing protein n=1 Tax=Conidio... [more]
M2WRH9_GALSU2.740e-1335.92E3 ubiquitin-protein ligase MARCH6 isoform 2 n=2 T... [more]
A0A7S1XCM2_9RHOD3.810e-1332.64Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1I8ISM1_9PLAT9.370e-1333.78RING-CH-type domain-containing protein n=1 Tax=Mac... [more]
A0A1X6NVZ3_PORUM1.100e-1237.32RING-CH-type domain-containing protein n=1 Tax=Por... [more]
A0A2R5GV60_9STRA1.140e-1237.16E3 ubiquitin-protein ligase MARCH6 n=1 Tax=Hondaea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 135..150
score: 54.69
coord: 186..204
score: 30.92
coord: 162..172
score: 36.36
coord: 73..84
score: 45.83
NoneNo IPR availablePANTHERPTHR13145SSM4 PROTEINcoord: 194..446
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 349..481
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 323..348
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 198..280
NoneNo IPR availableTMHMMTMhelixcoord: 326..348
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 202..279
e-value: 8.8E-14
score: 61.8
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 203..241
e-value: 1.9E-13
score: 50.3
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 195..285
score: 19.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 190..286
e-value: 1.8E-17
score: 64.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9567contigM-pyrifera_M_contig9567:600..10450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9567.22059.1mRNA_M-pyrifera_M_contig9567.22059.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9567 600..10450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9567.22059.1 ID=prot_M-pyrifera_M_contig9567.22059.1|Name=mRNA_M-pyrifera_M_contig9567.22059.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=481bp
MSAIEGDVPIPPPPAALPGESDNASSFFSRKLSSTMMQKKGRVNVTGGSH
FSGCRGASISVNIATSDGDVGGGGGSGGGDAGGSSGGGDGGGSGGGDKGG
GGSAFRGGNPDGRRGGGGGGGGGGGSGGGSGEGGGSGGGGAGGSGGGGEG
GEDGGGRGGADGGGGGESGGGGGDGGEGGSGGGGGGGGGDGAGSDTDEDV
PECRVCRGDDEGGTRPLAHPCRCRGSIKYVHQDCLIEWLRSRQYGGGVGG
GGGGGGGGGGGGVGRASAVLQYQRCELCREKLVFRARYRADAPRLLAFSE
FARGAMRRATPRLMDALRAGLNMLMWGVAVPIVICALFRLGLGLSLLFAQ
EFSAFFGGDVLMGSPGPAAVAVADGMAEDAAGSRGEGAMLPGLQRICWGG
WVDLLGDWCGGVSLMIGVMCLGPPSVELALELVAVLKALPVWLERWWTGG
QHVTGNVTLSGNPANQNQNPNANQNGNQDGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD