prot_M-pyrifera_M_contig95583.22034.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig95583.22034.1
Unique Name	prot_M-pyrifera_M_contig95583.22034.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	77

Homology

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BLAST of mRNA_M-pyrifera_M_contig95583.22034.1 vs. uniprot
Match: A0A6H5KGH1_9PHAE (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGH1_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 7.280e-25
Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = 0

Query:    3 GASG-AKPKGCLQKVSHVIESRMTIFFSSLGRTVAINPGRTVLLSFIGVIIGMSGFGVLETESRGDKLWLPTGTRA 77
            GAS  AKP  CLQK+SH IESRM  FFS LG  VAI+PG+TVLL+ +GV+IG SGF  LE ESRGDKLW+P+GTRA
Sbjct:    5 GASAEAKPATCLQKMSHAIESRMHAFFSRLGELVAIHPGKTVLLALVGVLIGASGFTTLEQESRGDKLWVPSGTRA 80

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BLAST of mRNA_M-pyrifera_M_contig95583.22034.1 vs. uniprot
Match: A0A7S1XPY4_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPY4_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 7.450e-7
Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 0

Query:    3 GASGAKPKG-----CLQKVSHVIESRMTIFFSSLGRTVAINPGRTVLLSFIGVIIGMSGFGV-LETESRGDKLWLPTGTRA 77
            G S A  KG        K+++ ++S+M   F+ LG  VA NP RT++++F+   + + G     +TESRG+KLW+P  T+A
Sbjct:   27 GRSNAAEKGEGEVSMAGKMANFVDSKMNDAFTKLGLAVATNPWRTIVVAFVVFFLTVMGAVFNFQTESRGEKLWIPQNTQA 107

[Close]

BLAST of mRNA_M-pyrifera_M_contig95583.22034.1 vs. uniprot
Match: A0A7S1G6H7_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6H7_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.700e-5
Identity = 25/73 (34.25%), Postives = 40/73 (54.79%), Query Frame = 0

Query:    2 AGASGAKPKGCLQKVSHVIESRMTIFFSSLGRTVAINPGRTVLLSFIGVIIGMSGFGVLETESRGDKLWLPTG 74
            AG+ G    G L ++S  ++  +   F  LG+  A  PG  +  + +  +  M+G G LE+ESR +KLW P+G
Sbjct:   17 AGSEG----GVLARLSRKVDVGLATAFGKLGKLTATRPGTVIACTLVLFMATMAGIGQLESESRSEKLWAPSG 85

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig95583.22034.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig95583.22034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KGH1_9PHAE	7.280e-25	69.74	SSD domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A7S1XPY4_9STRA	7.450e-7	37.04	Hypothetical protein n=3 Tax=Phaeomonas parva TaxI...	[more]
A0A7S1G6H7_9STRA	1.700e-5	34.25	Hypothetical protein n=2 Tax=Bicosoecida sp. CB-20...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..42
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 43..60
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 61..77
None	No IPR available	TMHMM	TMhelix		coord: 43..60

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig95583	contig	M-pyrifera_M_contig95583:152..382 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig95583.22034.1	mRNA_M-pyrifera_M_contig95583.22034.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig95583 152..382 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig95583.22034.1 ID=prot_M-pyrifera_M_contig95583.22034.1|Name=mRNA_M-pyrifera_M_contig95583.22034.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
MAGASGAKPKGCLQKVSHVIESRMTIFFSSLGRTVAINPGRTVLLSFIGV
IIGMSGFGVLETESRGDKLWLPTGTRA