prot_M-pyrifera_M_contig95552.22030.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95552.22030.1
Unique Nameprot_M-pyrifera_M_contig95552.22030.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length232
Homology
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BLAST of mRNA_M-pyrifera_M_contig95552.22030.1 vs. uniprot
Match: A0A7S1G983_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G983_9STRA)

HSP 1 Score: 147 bits (370), Expect = 8.400e-37
Identity = 87/232 (37.50%), Postives = 136/232 (58.62%), Query Frame = 0 
Query:    5 LRPVANSIVPAAVAMLNSVTPVVLTFLTHVVERWDSAADETGWLVWRLFTARLTSVLVLWLTFAALADPYLLRGRTLPFLASDPAFLQNLRASLARRFLPEAYRCRVDQAGAGLLTILAIEFIASKAVLLSYPLGALAWSLLTRTPYRKPEIDIANRMAALIYTLLVGIMCSSYVPLAPAITALVLLANFKAERFAVETWMQKPLRPWR----GGAAIIIVFLRLFLISVGV 232
            L P A+ IVP AV++LN++ P +LT L+   E+WDS   +   LVWRLF A++ ++L+   +FA LADPY+LRG T  F  SD  FL ++R S  +RF P++Y CR DQAGAG+  ++  EF+ SK + L+ P    A + + +  ++K +  +A  MAAL++   + +    + P    +  ++L   FK E F +  +  KPLRPW     GG      F++ +LIS+ +
Sbjct:  468 LAPFADFIVPVAVSVLNALQPPILTALSKF-EKWDSGGTQVKTLVWRLFIAKMLNMLLQIFSFAQLADPYMLRGPTFGF--SDTDFLVSVRQSTQKRFQPDSYACRADQAGAGIFQLVLAEFVVSKVIALATPFAFKALARVRKRVWKKAQHSVAQAMAALLFFTQLVMNSFPWTPFTAVVNTVLLYLTFKFEVFILRRFQVKPLRPWSAKDAGG-----FFVKFYLISLSI 691
[Close]
BLAST of mRNA_M-pyrifera_M_contig95552.22030.1 vs. uniprot
Match: A0A6G0WNY5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNY5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 9.670e-18
Identity = 71/220 (32.27%), Postives = 118/220 (53.64%), Query Frame = 0 
Query:    5 LRPVANSIVPAAVAMLNSVTPVVLTFLTHVVERWDSAADETGWLVWRLFTARLTSVLVLWLTFAALADPYLLRGRT-LPFLASDPAFLQNLRASLARRFLPEAYRCRVDQAGAGLLTILAIEFIASKAVLLSYPLGALAWSLLTR-TPYRKPEIDIAN--RMAALIYTLLVGIM--CSSY---VPLAP--AITALVLL-ANFKAERFAVETWMQKPLRPW 212
            L   A SIVP   A++N   P +++ LT   ERWD    E   +V RLF A++ ++L+   ++  L DPYL    T L      P+F+   R+++  +F  + Y CR +Q  +GL+ ++  +F+ SK   +   L A    L+ +    RK  + + N  R   LI   +V +M  C+ Y   +PLAP  A+T+L++L  NFK ++F ++ + +KP+ PW
Sbjct:  438 LTAYAASIVPLGAAVINGALPAIISILTKF-ERWDDQGFEIKAMVTRLFLAKVLNILIQLWSYGMLLDPYLYTENTALLDWMPIPSFV---RSNVMIKFKSDVYSCRAEQVASGLIILVLTDFVVSKVSAIVTALLAKVIELIKQWNAKRKKRVIVVNDTRTEFLIAPKMVALMYSCTLYQFSIPLAPVTAVTSLMMLIVNFKFDKFYLQKFQKKPITPW 653
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95552.22030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S1G983_9STRA8.400e-3737.50Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6G0WNY5_9STRA9.670e-1832.27Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..211
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 232..232
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
NoneNo IPR availableTMHMMTMhelixcoord: 212..231
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95552contigM-pyrifera_M_contig95552:2..697 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95552.22030.1mRNA_M-pyrifera_M_contig95552.22030.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95552 2..697 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95552.22030.1 ID=prot_M-pyrifera_M_contig95552.22030.1|Name=mRNA_M-pyrifera_M_contig95552.22030.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
QLAFLRPVANSIVPAAVAMLNSVTPVVLTFLTHVVERWDSAADETGWLVW
RLFTARLTSVLVLWLTFAALADPYLLRGRTLPFLASDPAFLQNLRASLAR
RFLPEAYRCRVDQAGAGLLTILAIEFIASKAVLLSYPLGALAWSLLTRTP
YRKPEIDIANRMAALIYTLLVGIMCSSYVPLAPAITALVLLANFKAERFA
VETWMQKPLRPWRGGAAIIIVFLRLFLISVGV
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