prot_M-pyrifera_M_contig9538.21997.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9538.21997.1
Unique Nameprot_M-pyrifera_M_contig9538.21997.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length189
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9538.21997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..57
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..41
score: 0.512
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 71..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9538contigM-pyrifera_M_contig9538:4009..4575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9538.21997.1mRNA_M-pyrifera_M_contig9538.21997.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9538 3812..4575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9538.21997.1 ID=prot_M-pyrifera_M_contig9538.21997.1|Name=mRNA_M-pyrifera_M_contig9538.21997.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp
MIPCSVRTYPSASTGHFGSSTCTLRLSLFLSLVFFLLELRSSVICGWACT
QASGSETLATVLSCSTRFCRFAALALFLLPLLPASSALDSFVPAVVESIV
SPATCAGSPSLLFFLFFFFTCSAEESGDNFVTSAPTLPAELSPLKSSRPM
FVASFLLLPPRSLLFALIAERVGPSDFVGLFTALLLFFG
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