prot_M-pyrifera_M_contig95347.21991.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig95347.21991.1
Unique Name	prot_M-pyrifera_M_contig95347.21991.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	112

Homology

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BLAST of mRNA_M-pyrifera_M_contig95347.21991.1 vs. uniprot
Match: A0A2E2SC65_9GAMM (Uncharacterized protein n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2E2SC65_9GAMM)

HSP 1 Score: 53.9 bits (128), Expect = 5.060e-6
Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0

Query:   15 ALQASAAQYYISPLGSDSNNGTSEQSPFLTLSKALNASSSGDSINAATGNY 65
            AL+  AA+YY+S  GS+SN+G SE  PFLT++KA+N +S GD++    G Y
Sbjct:   23 ALKIIAAEYYVSENGSNSNSGVSESEPFLTIAKAMNLTSPGDTVYVMDGTY 73

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BLAST of mRNA_M-pyrifera_M_contig95347.21991.1 vs. uniprot
Match: A0A7J9XZF0_9ACTN (DUF1565 domain-containing protein (Fragment) n=1 Tax=Micromonosporaceae bacterium TaxID=1873464 RepID=A0A7J9XZF0_9ACTN)

HSP 1 Score: 50.4 bits (119), Expect = 1.250e-5
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0

Query:    8 LLGVLALALQASAAQ-YYISPLGSDSNNGTSEQSPFLTLSKALNASSSGDSINAATGNY 65
            L+G + LA  A AA  YY+SP GSD+N GTS  SPF T+ +AL+ + SG +++ A+G Y
Sbjct:   16 LVGSILLAPPALAASDYYVSPSGSDANPGTSADSPFGTIQRALDVAPSGSTVHLASGVY 74

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BLAST of mRNA_M-pyrifera_M_contig95347.21991.1 vs. uniprot
Match: A0A2E4PLV9_FLASP (Cell wall-binding protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A2E4PLV9_FLASP)

HSP 1 Score: 52.0 bits (123), Expect = 2.320e-5
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0

Query:   20 AAQYYISPLGSDSNNGTSEQSPFLTLSKALNASSSGDSINAATGNY 65
            A  YY++  G+DSN+GTS  SPF TLSKA+N +SSGD+I    GN+
Sbjct:   21 ATNYYVATNGNDSNSGTSTNSPFQTLSKAINQASSGDTIYVRGGNH 66

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BLAST of mRNA_M-pyrifera_M_contig95347.21991.1 vs. uniprot
Match: UPI001F38DC60 (DUF1565 domain-containing protein n=1 Tax=Konateibacter massiliensis TaxID=2002841 RepID=UPI001F38DC60)

HSP 1 Score: 51.6 bits (122), Expect = 2.970e-5
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0

Query:    2 RWGAFFLLGVLAL---ALQASAAQYYISPLGSDSNNGTSEQSPFLTLSKALNASSSGDSINAATGNY 65
            +W  F +LGV+ L    ++A AA YYISP GSDSN GT   SP+ +++KA + +SSGD++    G Y
Sbjct:   18 KWIVFTVLGVICLLGAGMRAEAADYYISPSGSDSNAGT-YASPYKSITKAQSVASSGDTVYMLGGTY 83

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig95347.21991.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig95347.21991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A2E2SC65_9GAMM	5.060e-6	50.98	Uncharacterized protein n=1 Tax=Porticoccaceae bac...	[more]
A0A7J9XZF0_9ACTN	1.250e-5	49.15	DUF1565 domain-containing protein (Fragment) n=1 T...	[more]
A0A2E4PLV9_FLASP	2.320e-5	56.52	Cell wall-binding protein n=1 Tax=Flavobacterium s...	[more]
UPI001F38DC60	2.970e-5	46.27	DUF1565 domain-containing protein n=1 Tax=Konateib...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 13..110 e-value: 4.3E-14 score: 54.6
IPR011459	Domain of unknown function DUF1565	PFAM	PF07602	DUF1565	coord: 29..68 e-value: 1.4E-5 score: 24.6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..112
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.886
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 8..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig95347	contig	M-pyrifera_M_contig95347:99..434 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig95347.21991.1	mRNA_M-pyrifera_M_contig95347.21991.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig95347 99..434 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig95347.21991.1 ID=prot_M-pyrifera_M_contig95347.21991.1|Name=mRNA_M-pyrifera_M_contig95347.21991.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
MRWGAFFLLGVLALALQASAAQYYISPLGSDSNNGTSEQSPFLTLSKALN
ASSSGDSINAATGNYTGSENVGLSVVDRTISGASTSGTVFEGDNSDPFST
SGAVVFENLTLK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012334	Pectin_lyas_fold
IPR011459	DUF1565
IPR011050	Pectin_lyase_fold/virulence