prot_M-pyrifera_M_contig95333.21986.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95333.21986.1
Unique Nameprot_M-pyrifera_M_contig95333.21986.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length188
Homology
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: A0A6L5F5N6_9ACTN (Tyrosine-type recombinase/integrase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L5F5N6_9ACTN)

HSP 1 Score: 200 bits (509), Expect = 7.350e-61
Identity = 108/176 (61.36%), Postives = 131/176 (74.43%), Query Frame = 0
Query:   13 SLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPAMADLCPVSGH-ARLSYRRAEELWKTASGGHTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDPNRR 187
            SLRDR+LW + YDTAARA+E+LGL++ENLD    +AV+ GKGG+AER+YW+S TARLL R L      R SGPLF+  R  +    PA A      G+  RLSYRRA  ++K ASGG TLH+LRHS LTHL EAGED+ +++AKSRH SLRSLERY NPSP AI +LT+RHDPNRR
Sbjct:  139 SLRDRLLWRILYDTAARAEEILGLDVENLDRPINQAVVKGKGGSAERVYWTSETARLLTRYLA----GRKSGPLFLTHRGAK----PAHAASSDRYGNQTRLSYRRAAAIFKQASGGATLHKLRHSALTHLVEAGEDIALVRAKSRHTSLRSLERYTNPSPAAIAELTDRHDPNRR 306          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: A0A2W5ZT51_9ACTN (Site-specific integrase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A2W5ZT51_9ACTN)

HSP 1 Score: 191 bits (486), Expect = 2.340e-57
Identity = 97/186 (52.15%), Postives = 128/186 (68.82%), Query Frame = 0
Query:    2 ELAAVWGETAHSLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPAMADLCPVSGHARLSYRRAEELWKTASGGHTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDPNRR 187
            +L  +W     ++R++ LW + Y+TAARA E+L +N+E++D  N+ A +  KGG+ E ++  S +ARLLPRL+T     R  GPLF+ DRRP     PA +DLCP +G  RLSYRRAEEL+  ASGG TLHQLRHS +THLAEA   + ++ AKSRH SLRSL+RY  P P+A+  LT  HDP RR
Sbjct:  128 QLDRLWRRDDVAVREKTLWRLLYETAARAQEVLSVNVEDVDLENKRARVRSKGGDTEWLHLQSGSARLLPRLIT----GRERGPLFLADRRPAPARIPAASDLCPSTGRGRLSYRRAEELFCAASGGWTLHQLRHSAITHLAEADVGLALLMAKSRHTSLRSLQRYARPGPEAVAKLTAEHDPERR 309          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: A0A6L5F2K1_9ACTN (Tyrosine-type recombinase/integrase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L5F2K1_9ACTN)

HSP 1 Score: 189 bits (481), Expect = 1.180e-56
Identity = 106/176 (60.23%), Postives = 128/176 (72.73%), Query Frame = 0
Query:   13 SLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPAMADLCPVSGH-ARLSYRRAEELWKTASGGHTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDPNRR 187
            SLRDR+LW M YDTAARADE+L L++E+LD    +AV+ GKGG+AER++W+S TARLL R L      R SGPLF+ +R  R    PA A      G+  RLSYRRA  ++K ASG  TLH+LRHS LTHL EAGED+ +++AKSRH SLRSLERY NPS  AI  LT+RHDPNRR
Sbjct:  139 SLRDRLLWRMLYDTAARADEILSLDVEDLDRPINQAVVKGKGGSAERVHWTSETARLLTRYLA----GRKSGPLFLTERGAR----PAHAASSDRYGNQTRLSYRRAAAIFKQASGS-TLHKLRHSALTHLVEAGEDIALVRAKSRHTSLRSLERYTNPSSGAIAALTDRHDPNRR 305          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: A0A7J9YVL4_9ACTN (Tyrosine-type recombinase/integrase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7J9YVL4_9ACTN)

HSP 1 Score: 180 bits (456), Expect = 7.620e-53
Identity = 92/185 (49.73%), Postives = 123/185 (66.49%), Query Frame = 0
Query:    3 LAAVWGETAHSLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPAMADLCPVSGHARLSYRRAEELWKTASGGHTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDPNRR 187
            L  +W     ++R++ LW + Y+TAARA E+L L++ ++D  NR A +  KGG+ + ++  + +ARLLPRL+      R  GP+F+  RRP     PA ADLCP +G ARLSYRRAEE++   SGG TLHQLRHS LTHLAEA   + ++ AKSRH SLRSL+RY  P P+A+  LT  HD  RR
Sbjct:  129 LERLWRRDDVAVREKALWRLLYETAARAQEVLSLDVSDVDLDNRRARVRSKGGDTDWLHLQTGSARLLPRLVA----GRSRGPVFLAARRPAPARTPATADLCPYTGRARLSYRRAEEIFSAVSGGWTLHQLRHSALTHLAEADVSLPLLMAKSRHTSLRSLQRYARPGPEAVAKLTAEHDRERR 309          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: A0A7Y0D6E2_CELSP (Site-specific integrase n=2 Tax=Micrococcales TaxID=85006 RepID=A0A7Y0D6E2_CELSP)

HSP 1 Score: 177 bits (449), Expect = 7.710e-52
Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 0
Query:   14 LRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPAMADLCPVSGHARLSYRRAEELWKTASGGHTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDP 184
            +RDR LW + Y+T ARA+E+L LN+E+LD   + A  + KGG+ + I++ + +ARLLP ++      R +GP+F+  R P    APA  DLC  +G ARLSYRRA E++ TASGG TLHQLRHS +THLAEAG  + ++ AKSRH SLR+L+RY  PS +A+  LT  HDP
Sbjct:  136 VRDRALWRLLYETGARAEEVLRLNVEDLDLVAKRATTVRKGGDLDTIHFQTGSARLLPTVIG----GRAAGPVFLSSRSPSPARAPASTDLCSTTGQARLSYRRAAEIFTTASGGRTLHQLRHSAITHLAEAGVPLPLLMAKSRHASLRTLQRYARPSVEAVAALTAAHDP 302          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: A0A6I2XUZ5_9ACTN (Tyrosine-type recombinase/integrase n=2 Tax=root TaxID=1 RepID=A0A6I2XUZ5_9ACTN)

HSP 1 Score: 179 bits (454), Expect = 1.500e-51
Identity = 93/186 (50.00%), Postives = 124/186 (66.67%), Query Frame = 0
Query:    2 ELAAVWGETAHSLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPAMADLCPVSGHARLSYRRAEELWKTASGGHTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDPNRR 187
            +L  +W      +RDR LW M Y+TAARA E+L LN+E+LD   R A  + KGG  + I+W++ TARLLP    Y +  R +GP+F+  R  ++  APA AD+ P +G ARLSY RA + + TA+ G TLHQLRHS LTHLAE G  + ++ AKSRH SL++L+RYV PS DA+  +T  HDP RR
Sbjct:  220 DLDRLWARKDVPVRDRCLWRMLYETAARAQEVLRLNVEDLDMHQRRATTVRKGGAIDTIHWATGTARLLP----YVIDGRATGPVFLSSRPVQARRAPATADIDPETGLARLSYARAAQAFSTATDGWTLHQLRHSALTHLAEDGVPLPLLMAKSRHESLKTLQRYVRPSADAVAAMTAAHDPARR 401          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: A0A1H8WPQ6_9ACTN (Integrase/recombinase XerD n=1 Tax=Blastococcus endophyticus TaxID=673521 RepID=A0A1H8WPQ6_9ACTN)

HSP 1 Score: 176 bits (447), Expect = 2.180e-51
Identity = 100/184 (54.35%), Postives = 124/184 (67.39%), Query Frame = 0
Query:    3 LAAVWGETAHSLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPAMADLCPVSGHARLSYRRAEELWKTASGG-------HTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLT 179
            LA +W     + RDR LW MAY+T ARADELLGLNIE+LD ANREA++ GKGG+ ERI+W++ TARLLPRL+      R +GPLF+  RRP   +  A  DL  VSG ARLSYR+AE ++  A           TLH+LRH+ ++H  E G  V  I+AKSRH SLRSLE Y NPS D+IR +T
Sbjct:  129 LAELWALDGVAGRDRTLWRMAYETWARADELLGLNIEDLDLANREALVNGKGGDRERIWWATGTARLLPRLIA----GRATGPLFLAARRPTRPMPAADIDL--VSGRARLSYRQAERIFAEAGQRLDPDGTPFTLHRLRHAGISHAVEDGYSVAAIRAKSRHESLRSLEVYTNPSADSIRAMT 306          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: UPI000A04587E (site-specific integrase n=1 Tax=Nonomuraea candida TaxID=359159 RepID=UPI000A04587E)

HSP 1 Score: 174 bits (442), Expect = 1.160e-50
Identity = 97/182 (53.30%), Postives = 120/182 (65.93%), Query Frame = 0
Query:   12 HSLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRR-PRS-HLAPAMADLCPVSGHARLSYRRAEELWKTASGG-------HTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDP 184
            H LR+RVLW + Y+TAARA+E+L LN+E+LD   R A +  KGG  E ++W++  ARLLPRLL    Q R +GP+F+ DRR P S   APA AD+CPV+G  RLSY RAE L+KTAS G        TLHQLRHS LTHLA AG     ++AKSRH+ L SL RYV    +    +T  HDP
Sbjct:  134 HPLRERVLWRLLYETAARAEEILALNVEDLDPELRRARVRSKGGGIEHVHWATAAARLLPRLL----QGRQAGPVFLADRRAPTSGRRAPAAADICPVTGRGRLSYPRAEHLFKTASAGLDPHGEGWTLHQLRHSALTHLAAAGRTAPELQAKSRHQHLSSLGRYVRLGDETAARITAEHDP 311          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: A0A853DIG4_9MICO (Integrase n=1 Tax=Allobranchiibius huperziae TaxID=1874116 RepID=A0A853DIG4_9MICO)

HSP 1 Score: 174 bits (440), Expect = 1.980e-50
Identity = 92/176 (52.27%), Postives = 122/176 (69.32%), Query Frame = 0
Query:   12 HSLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPAMADLCPVSGHARLSYRRAEELWKTASGGHTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDPNRR 187
            H+LR+R LW M Y+TAARA+E+L L++ +LD  NR A  I KGG+ + ++++S TARLLPR+L      R  GP+F+  R PR+   PA++DL P +GHARLSYR+A  L+  A+ G TLHQLRHS LTHLAE G    ++ AKSRH +L SL+RYV PS  A+  LT   DP+ R
Sbjct:  135 HALRERALWRMLYETAARAEEVLRLDVGDLDLINRTARTIRKGGDRDTLHYASGTARLLPRVLA----GRDRGPVFLSSRPPRTDALPALSDLDPATGHARLSYRQAAALFTDATHGATLHQLRHSALTHLAETGASSALLMAKSRHAALSSLQRYVAPSQTAVAQLTAGLDPHGR 306          
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Match: UPI0017B989A1 (Tyrosine-type recombinase/integrase n=1 Tax=Streptomyces sp. TaxID=1931 RepID=UPI0017B989A1)

HSP 1 Score: 172 bits (435), Expect = 2.010e-50
Identity = 97/194 (50.00%), Postives = 125/194 (64.43%), Query Frame = 0
Query:    3 LAAVWGETAHSLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVIIGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRR-----PRSHLAPAMADLCPVSGHARLSYRRAEELWKTASG-------GHTLHQLRHSRLTHLAEAGEDVTMIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDP 184
            L A++    H+LR+RVLW + Y+TAARA+E+L LNIE+LD A R A +  KGG  E ++W++ TAR+LPRLL      R +GP+F+ DRR     PR+   PA ADLCP +G  RLSY RAE L+KTA+        G TLHQLRHS L HLAEAG     ++AKSRH+ L SL RY+    +    +T  HDP
Sbjct:   58 LEALFTNDQHALRERVLWRLLYETAARAEEVLSLNIEDLDLAYRRARVASKGGAIEYVHWATATARILPRLLA----GRTTGPVFLADRRAPASGPRT---PAAADLCPETGRGRLSYPRAEYLFKTATAQFDPHGEGWTLHQLRHSALQHLAEAGRTAPELQAKSRHQHLASLGRYIRLGEETSARITAEHDP 244          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95333.21986.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L5F5N6_9ACTN7.350e-6161.36Tyrosine-type recombinase/integrase n=1 Tax=Acidim... [more]
A0A2W5ZT51_9ACTN2.340e-5752.15Site-specific integrase n=1 Tax=Solirubrobacterale... [more]
A0A6L5F2K1_9ACTN1.180e-5660.23Tyrosine-type recombinase/integrase n=1 Tax=Acidim... [more]
A0A7J9YVL4_9ACTN7.620e-5349.73Tyrosine-type recombinase/integrase n=1 Tax=Soliru... [more]
A0A7Y0D6E2_CELSP7.710e-5251.46Site-specific integrase n=2 Tax=Micrococcales TaxI... [more]
A0A6I2XUZ5_9ACTN1.500e-5150.00Tyrosine-type recombinase/integrase n=2 Tax=root T... [more]
A0A1H8WPQ6_9ACTN2.180e-5154.35Integrase/recombinase XerD n=1 Tax=Blastococcus en... [more]
UPI000A04587E1.160e-5053.30site-specific integrase n=1 Tax=Nonomuraea candida... [more]
A0A853DIG4_9MICO1.980e-5052.27Integrase n=1 Tax=Allobranchiibius huperziae TaxID... [more]
UPI0017B989A12.010e-5050.00Tyrosine-type recombinase/integrase n=1 Tax=Strept... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 1..185
e-value: 2.5E-25
score: 90.9
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 11..170
e-value: 1.1E-15
score: 57.9
NoneNo IPR availablePANTHERPTHR30349PHAGE INTEGRASE-RELATEDcoord: 15..177
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 5..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95333contigM-pyrifera_M_contig95333:3..566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95333.21986.1mRNA_M-pyrifera_M_contig95333.21986.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95333 3..566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95333.21986.1 ID=prot_M-pyrifera_M_contig95333.21986.1|Name=mRNA_M-pyrifera_M_contig95333.21986.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp
AELAAVWGETAHSLRDRVLWAMAYDTAARADELLGLNIENLDTANREAVI
IGKGGNAERIYWSSTTARLLPRLLTYKLQPRVSGPLFIGDRRPRSHLAPA
MADLCPVSGHARLSYRRAEELWKTASGGHTLHQLRHSRLTHLAEAGEDVT
MIKAKSRHRSLRSLERYVNPSPDAIRDLTNRHDPNRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR002104Integrase_catalytic
IPR011010DNA_brk_join_enz