prot_M-pyrifera_M_contig9506.21934.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig9506.21934.1
Unique Name	prot_M-pyrifera_M_contig9506.21934.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	38

Homology

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BLAST of mRNA_M-pyrifera_M_contig9506.21934.1 vs. uniprot
Match: D7G5I9_ECTSI (Zeaxanthin epoxidase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I9_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.040e-10
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0

Query:    1 MSPFEVDAPGGINSFMTSLMKPALPLIFYMQFMYLYRY 38
            +SPF +DAPGGINSFMTS+MKP LPLIF+ QFMYLY +
Sbjct:  479 LSPFNMDAPGGINSFMTSVMKPVLPLIFFAQFMYLYSF 516

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig9506.21934.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig9506.21934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G5I9_ECTSI	1.040e-10	76.32	Zeaxanthin epoxidase, chloroplast n=1 Tax=Ectocarp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..36
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 37..38
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 15..37

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig9506	contig	M-pyrifera_M_contig9506:7646..7759 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig9506.21934.1	mRNA_M-pyrifera_M_contig9506.21934.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig9506 7640..7759 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig9506.21934.1 ID=prot_M-pyrifera_M_contig9506.21934.1|Name=mRNA_M-pyrifera_M_contig9506.21934.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
MSPFEVDAPGGINSFMTSLMKPALPLIFYMQFMYLYRY