prot_M-pyrifera_M_contig94909.21893.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94909.21893.1
Unique Nameprot_M-pyrifera_M_contig94909.21893.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A1S3IYI9_LINUN (3'-5' exoribonuclease 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IYI9_LINUN)

HSP 1 Score: 100 bits (248), Expect = 1.230e-22
Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRIN 106
            K+A ATDGPWD  +FL  +C    +PFPK   +++++R+ F   Y+ R              K++  L+YLG+EFEGE+HRGIDD KNIARI   ++  G  LRIN
Sbjct:  207 KFAVATDGPWDMSRFLYQQCHLSNVPFPKWGRKWINVRKAFGNCYSVRQ------------VKLTTMLEYLGMEFEGEQHRGIDDAKNIARILLCMLKDGCELRIN 300          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: V3ZNW8_LOTGI (Exonuclease domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZNW8_LOTGI)

HSP 1 Score: 96.7 bits (239), Expect = 1.050e-21
Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRIN 106
            K+A ATDGPWD  +FL  +C    +PFPK  +++V++R+ FA  Y R                + N L++LGLEFEG +H G+DDT+NIARIAQ L+  G  + +N
Sbjct:  167 KFAVATDGPWDMRRFLFYQCQMLDMPFPKWAKKWVNLRKLFANFYRRERGN------------IENMLRHLGLEFEGRQHCGMDDTRNIARIAQRLIKDGCFIDVN 260          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A7S2U1I5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U1I5_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 1.720e-21
Identity = 48/106 (45.28%), Postives = 60/106 (56.60%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRIN 106
            K+ FATDGPWD  KFL PEC RK IP P+  + + +IR  FA  +       H R G      ++  L +  LEF+G  H G+DD+KNIARIA  L   G  L IN
Sbjct:   13 KFVFATDGPWDLQKFLNPECQRKKIPRPRYYDMWANIRYHFAEFH-------HSRRG-----NINKMLGHYRLEFQGNAHSGLDDSKNIARIAIELAREGCKLDIN 106          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A817UU02_9BILA (Hypothetical protein n=3 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A817UU02_9BILA)

HSP 1 Score: 89.4 bits (220), Expect = 4.380e-20
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRIN 106
            K AFATDGPWDF KFLR +C    IP+P+  +++++IR+ FA  Y+ +             + +   L+ LGL F+G  H G+DD+ NIARIA  L+  G VL +N
Sbjct:   37 KCAFATDGPWDFAKFLRLQCRFNSIPYPRWAKKWINIRKEFANFYSLQR------------WGIGKMLESLGLIFDGRRHSGLDDSINIARIALELIKDGCVLLLN 130          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A814G891_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814G891_ADIRI)

HSP 1 Score: 90.9 bits (224), Expect = 1.300e-19
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRINSEEED 111
            K+AFATDGPWDF  FL+ +C    +P+P+   ++++IR+ FA  Y+ R           C   +   L+ LG  FEG++H G+DD+ NIARIA  L+  G +L +N    D
Sbjct:  198 KFAFATDGPWDFANFLQMQCRLNSLPYPEWANQWINIRKVFARFYSMRS----------C--GIVKMLQKLGFSFEGQQHSGLDDSTNIARIAVQLLKDGCILSLNDGIRD 296          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A139A0U8_GONPJ (Exonuclease (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A0U8_GONPJ)

HSP 1 Score: 87.8 bits (216), Expect = 3.080e-19
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 0
Query:    3 AFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAA----QYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRINSEEED 111
            +F TDGPWD   F+R +C R GI  P  M R+VD+R TF+        RRPN             +++ LK+  ++F+G  H GIDD +NIAR+A  ++ +GI    N  E D
Sbjct:  102 SFLTDGPWDLRDFMRKQCARSGIKRPPYMRRWVDLRRTFSKIIQLPSKRRPN-------------LASMLKHYNMDFDGRPHSGIDDARNIARLALHMMRSGIKFPENGTERD 201          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A815P9A7_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A815P9A7_9BILA)

HSP 1 Score: 86.3 bits (212), Expect = 4.530e-19
Identity = 47/108 (43.52%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRINSE 108
            K AFATDGPWDF KFLR +C    I +P+  + +++IR+ FA  Y  R      R G      +   L  LGL F+G  H GIDD  NIARI   L+  G VL  N +
Sbjct:   35 KLAFATDGPWDFAKFLRMQCHLSSIDYPRWAKEWINIRKEFAKFYPVR------RCG------IEKMLNNLGLSFDGRRHSGIDDAINIARITLELMKDGCVLLFNDD 130          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A813U4S7_9BILA (Hypothetical protein n=5 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A813U4S7_9BILA)

HSP 1 Score: 89.4 bits (220), Expect = 8.300e-19
Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRIN 106
            K AFATDGPWDF KFLR +C    IP+P+  +++++IR+ FA  Y+ +      R G      +   L+ LGL F+G  H G+DD+ NIARIA  L+  G VL +N
Sbjct:  222 KCAFATDGPWDFAKFLRLQCRFNSIPYPRWAKKWINIRKEFANFYSLQ------RCG------IGKMLESLGLIFDGRRHSGLDDSINIARIALELIKDGCVLLLN 315          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A0N5AUX6_9BILA (Exonuclease domain-containing protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AUX6_9BILA)

HSP 1 Score: 87.8 bits (216), Expect = 1.010e-18
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRI 105
            +YAF +DGPWDF KFL+ +C +  IP P    RYV+IR+TF  +Y +  +         C   ++N L+ L + FEG  H G+DD KNIA+I   ++   + +R+
Sbjct:  173 RYAFVSDGPWDFAKFLQMQCEKSNIPIPDDFRRYVNIRKTFHTKYCKANDTQRV-----C---LTNMLRKLDMTFEGRRHCGLDDAKNIAKIVLRMLFDDVEIRV 269          
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Match: A0A818RSI6_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A818RSI6_9BILA)

HSP 1 Score: 88.6 bits (218), Expect = 1.530e-18
Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    1 KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPNRFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAGIVLRIN 106
            K  FATDGPWDF KFLR +C    IP+P+  ++++++R+ FA+ Y+ +      R G      ++  LK +GL F+G  H G+DD+ NIARIA  L+  G +L +N
Sbjct:  222 KCGFATDGPWDFAKFLRIQCGFNSIPYPRWAKKWINVRKEFASFYSVQ------RCG------ITKMLKSVGLVFDGRHHSGLDDSVNIARIALELMKDGCILLLN 315          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94909.21893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S3IYI9_LINUN1.230e-2244.343'-5' exoribonuclease 1 n=1 Tax=Lingula unguis Tax... [more]
V3ZNW8_LOTGI1.050e-2143.40Exonuclease domain-containing protein (Fragment) n... [more]
A0A7S2U1I5_9EUKA1.720e-2145.28Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A817UU02_9BILA4.380e-2042.45Hypothetical protein n=3 Tax=unclassified Rotaria ... [more]
A0A814G891_ADIRI1.300e-1939.64Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]
A0A139A0U8_GONPJ3.080e-1938.94Exonuclease (Fragment) n=1 Tax=Gonapodya prolifera... [more]
A0A815P9A7_9BILA4.530e-1943.52Hypothetical protein n=1 Tax=Rotaria sordida TaxID... [more]
A0A813U4S7_9BILA8.300e-1944.34Hypothetical protein n=5 Tax=unclassified Rotaria ... [more]
A0A0N5AUX6_9BILA1.010e-1839.05Exonuclease domain-containing protein n=1 Tax=Syph... [more]
A0A818RSI6_9BILA1.530e-1841.51Hypothetical protein n=4 Tax=Rotaria TaxID=231623 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..111
e-value: 3.1E-29
score: 104.0
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 4..92
e-value: 1.4E-5
score: 25.7
NoneNo IPR availablePANTHERPTHR230443'-5' EXONUCLEASE ERI1-RELATEDcoord: 3..107
NoneNo IPR availablePANTHERPTHR23044:SF37ERI1 EXORIBONUCLEASE 2coord: 3..107
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94909contigM-pyrifera_M_contig94909:22..354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94909.21893.1mRNA_M-pyrifera_M_contig94909.21893.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94909 22..354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94909.21893.1 ID=prot_M-pyrifera_M_contig94909.21893.1|Name=mRNA_M-pyrifera_M_contig94909.21893.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
KYAFATDGPWDFDKFLRPECVRKGIPFPKAMERYVDIRETFAAQYARRPN
RFHDRPGPWCYFKVSNALKYLGLEFEGEEHRGIDDTKNIARIAQALVAAG
IVLRINSEEED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR012337RNaseH-like_sf