prot_M-pyrifera_M_contig9472.21854.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9472.21854.1
Unique Nameprot_M-pyrifera_M_contig9472.21854.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length449
Homology
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BLAST of mRNA_M-pyrifera_M_contig9472.21854.1 vs. uniprot
Match: D7FMF6_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF6_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 1.150e-135
Identity = 246/410 (60.00%), Postives = 279/410 (68.05%), Query Frame = 0 
Query:   54 SAQHVPGLGLETIPCRNRSNQMLYLSVEAASVRMNSVLVTVFAGFWIRNLSGLPLTLGEPVPAGLSALELQQETGIDRRDRAQRQDQNGGRSCCGRYSPSPPRGHSLCDVLVSAVQSDQHGMSEEVFELRSERAGHHGTDAYDTRWCTAQANPRMPYTQVRLPSDLWRWEGDWAIDRSGAVAPDAPGTDGGGWESCPRKPKGKNYGSTSFAPSRSFKLSDPIWRRRWVRRRVPC-RPPSARGTDSAPNS-LPKSATXXXXXXXXXXXXXXXXXXXXXXXGGKRRDASESMT-RPGRERPTSWSKQRSGR--YTVMNRCDCVLVVSQYGSDVSMELEPGESRPLHWADGSLEATLSVTV-------AAPPASAEASE--GALMGWSGPVGIGNIGKFPICIRPMPGGAALP 449
            +++HVPG+ L+++PCRN SNQ+LYLSVEAASVRMNSVLVTVF+GFW+RNLSGLPLTLGEPV  GLS LEL +E   D          +  R    RYSPSPPR  S  DV +SAVQSDQHGM+EEVFELR  R G  G D+YDTRW TAQ NPR P TQVRLPSDLWRW+G+W +D SGAVAP+APGT GGGWESCPRK KG +Y ++SF+ SR+F LSDP+WRRR  RR V   R   A     AP S +                             G  +D     T  PGR R TS  + R  R  YTVMN+CDCVLVV QYGS+V+MEL PGESRPLHWADGSLEATLSV+V       AA  +S E S    ALM WSGPVGIGNIG FPICIRP PGGAALP
Sbjct:  611 TSEHVPGISLQSVPCRNMSNQILYLSVEAASVRMNSVLVTVFSGFWVRNLSGLPLTLGEPVSRGLSPLELHEERLAD----------SAARDKMRRYSPSPPR-QSSWDVHLSAVQSDQHGMTEEVFELRLARRGQEGMDSYDTRWITAQGNPRSPCTQVRLPSDLWRWDGEWTMDVSGAVAPNAPGTGGGGWESCPRKLKGASYSNSSFSSSRAFTLSDPVWRRRGTRRPVSRHRLSRASPWGKAPRSFISHRQAWSARSGSQQLRPPERSGGVRGARAGPEQDYVCGWTILPGRGRSTSRCRGRGDRFRYTVMNKCDCVLVVRQYGSNVTMELGPGESRPLHWADGSLEATLSVSVISRGTTAAAAGSSPEMSPTTAALMDWSGPVGIGNIGTFPICIRPKPGGAALP 1009
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BLAST of mRNA_M-pyrifera_M_contig9472.21854.1 vs. uniprot
Match: A0A6H5L5D8_9PHAE (PHS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5D8_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 1.800e-102
Identity = 163/236 (69.07%), Postives = 189/236 (80.08%), Query Frame = 0 
Query:   54 SAQHVPGLGLETIPCRNRSNQMLYLSVEAASVRMNSVLVTVFAGFWIRNLSGLPLTLGEPVPAGLSALELQQETGIDRRDRAQRQDQNGGRSCCGRYSPSPPRGHSLCDVLVSAVQSDQHGMSEEVFELRSERAGHHGTDAYDTRWCTAQANPRMPYTQVRLPSDLWRWEGDWAIDRSGAVAPDAPGTDGGGWESCPRKPKGKNYGSTSFAPSRSFKLSDPIWRRRWVRRRVPCRP 289
            +++HVPG+ L+++PCRN SNQ+LYLSVEAASVRMNSVLVTV+AGFW+RNLSGLPLTLGEPV  GLS LEL +E   D          +  R    RYSPSPPR  S+ DV +SAVQSDQHG++EEVFELR  R G  G D+YDTRW TAQ NPR P TQVRLPSDLWRW+G+W ID SGAVAP+APGTDGGGWESCPRK KG +Y ++SF+ SR+F LSDP+WRRRWVRRRVP RP
Sbjct:  494 TSEHVPGISLQSVPCRNMSNQILYLSVEAASVRMNSVLVTVYAGFWVRNLSGLPLTLGEPVSRGLSPLELHEERLAD----------SAARDKTRRYSPSPPRQSSV-DVYLSAVQSDQHGLTEEVFELRLARRGEEGMDSYDTRWITAQGNPRSPCTQVRLPSDLWRWDGEWTIDVSGAVAPNAPGTDGGGWESCPRKLKGASYSNSSFSSSRAFTLSDPVWRRRWVRRRVPYRP 718
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BLAST of mRNA_M-pyrifera_M_contig9472.21854.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 3.430e-19
Identity = 56/77 (72.73%), Postives = 57/77 (74.03%), Query Frame = 0 
Query:  381 MELEPGESRPLHWADGSLEATLSVTV--------AAPPASAEASEGALMGWSGPVGIGNIGKFPICIRPMPGGAALP 449
            MEL PGESRPLHWADGSLEATLSV+V        A   AS  A   ALM WSGPVGIGNIG FPICIRP PGGAALP
Sbjct:    1 MELGPGESRPLHWADGSLEATLSVSVISQGLTAAATGSASEMAPTAALMDWSGPVGIGNIGTFPICIRPKPGGAALP 77
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9472.21854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMF6_ECTSI1.150e-13560.00SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L5D8_9PHAE1.800e-10269.07PHS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5KXT8_9PHAE3.430e-1972.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009543Vacuolar protein sorting-associated protein 13, SHR-binding domainPFAMPF06650SHR-BDcoord: 359..442
e-value: 7.0E-8
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9472contigM-pyrifera_M_contig9472:2591..10692 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9472.21854.1mRNA_M-pyrifera_M_contig9472.21854.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9472 2591..10719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9472.21854.1 ID=prot_M-pyrifera_M_contig9472.21854.1|Name=mRNA_M-pyrifera_M_contig9472.21854.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=449bp
MPRQVVAADGSRRGRAAAADRRALEENTNARGRNSNSVTSLMAGGGGGGG
GGGSAQHVPGLGLETIPCRNRSNQMLYLSVEAASVRMNSVLVTVFAGFWI
RNLSGLPLTLGEPVPAGLSALELQQETGIDRRDRAQRQDQNGGRSCCGRY
SPSPPRGHSLCDVLVSAVQSDQHGMSEEVFELRSERAGHHGTDAYDTRWC
TAQANPRMPYTQVRLPSDLWRWEGDWAIDRSGAVAPDAPGTDGGGWESCP
RKPKGKNYGSTSFAPSRSFKLSDPIWRRRWVRRRVPCRPPSARGTDSAPN
SLPKSATDSVPSLAQESAKNLASGRAGSSGGGKRRDASESMTRPGRERPT
SWSKQRSGRYTVMNRCDCVLVVSQYGSDVSMELEPGESRPLHWADGSLEA
TLSVTVAAPPASAEASEGALMGWSGPVGIGNIGKFPICIRPMPGGAALP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009543SHR-BD