prot_M-pyrifera_M_contig94642.21839.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94642.21839.1
Unique Nameprot_M-pyrifera_M_contig94642.21839.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length188
Homology
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A6I6AF66_9PLAN (SMC-Scp complex subunit ScpB n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AF66_9PLAN)

HSP 1 Score: 362 bits (930), Expect = 1.540e-125
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0
Query:    1 AVKTSSQTATKRETRIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            AVKTSSQTATKRETRIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELI+IERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK
Sbjct:   68 AVKTSSQTATKRETRIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELISIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 254          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A518ILQ2_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518ILQ2_9PLAN)

HSP 1 Score: 325 bits (834), Expect = 6.210e-111
Identity = 162/183 (88.52%), Postives = 175/183 (95.63%), Query Frame = 0
Query:    5 SSQTATKRETRIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            SSQ+ +KRE RIPPR IIEAALFVGG PLTTKKLCSLLNDEYS+SYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILR+DFERIRNRV+GFGPKE+KL+QDALEVLALVAY QPITKD I+ AGKDKAAGILRQL+RRELIAIER EDKKAEV+YITT+RFLQVFGLGN+EELPYSESL+HK
Sbjct:   71 SSQSQSKREARIPPRQIIEAALFVGGNPLTTKKLCSLLNDEYSSSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRYDFERIRNRVFGFGPKEIKLSQDALEVLALVAYHQPITKDSIVEAGKDKAAGILRQLLRRELIAIEREEDKKAEVRYITTARFLQVFGLGNVEELPYSESLSHK 253          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A355G963_9PLAN (Uncharacterized protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G963_9PLAN)

HSP 1 Score: 320 bits (821), Expect = 5.520e-109
Identity = 160/183 (87.43%), Postives = 175/183 (95.63%), Query Frame = 0
Query:    5 SSQTATKRETRIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            +S T+ KRE RIPPR IIEAALFVGGKPLTTKKLCSLLNDEYS+SYVDDLLDD+NRQYN+EARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKL+QDALEVLALVAY+QPI+K++II AGKDKA GILRQL+RRELIAIER + KKA+VKYITT+RFLQVFGLGNIEELPYSESL+HK
Sbjct:   69 TSSTSVKREARIPPRQIIEAALFVGGKPLTTKKLCSLLNDEYSSSYVDDLLDDINRQYNEEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLSQDALEVLALVAYQQPISKEQIIEAGKDKANGILRQLLRRELIAIERADQKKADVKYITTARFLQVFGLGNIEELPYSESLSHK 251          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A517X3V5_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X3V5_9PLAN)

HSP 1 Score: 305 bits (782), Expect = 6.920e-103
Identity = 151/183 (82.51%), Postives = 171/183 (93.44%), Query Frame = 0
Query:    5 SSQTATKRETRIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            SS T ++RE R+PPR IIEAALFVGG+PLTTKKLC+LLN E+S+SYVDDLLDDLNRQY DEARPYEIRMEEGGYRL+LRHDFERIRNRV+GFGPKEVKL+QDALEVLALVAY QPI+KD+II AGK+KA G+LRQL+RRELIAIER  + K++VKYITT+RFLQVFGLGNIEELPYSESL+HK
Sbjct:   80 SSLTESQREARVPPRQIIEAALFVGGEPLTTKKLCNLLNSEFSSSYVDDLLDDLNRQYIDEARPYEIRMEEGGYRLVLRHDFERIRNRVFGFGPKEVKLSQDALEVLALVAYHQPISKDQIIEAGKEKAVGVLRQLLRRELIAIEREAEGKSDVKYITTARFLQVFGLGNIEELPYSESLSHK 262          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A2E7D6P0_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D6P0_9PLAN)

HSP 1 Score: 213 bits (543), Expect = 3.370e-66
Identity = 109/184 (59.24%), Postives = 135/184 (73.37%), Query Frame = 0
Query:    4 TSSQTATKRETRIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            T +  A K   R+ P+ +IEAALFVGG PLT KKL SL   E +   V+ +LD+LN  Y  E RPYEIR+ EGGYRL LR DF+ +RNRVYG GPKEVKL+++A+EVLALVAYRQP+TK EI   GKD     +RQL+RRELI IER + +K E+KY TT RFL +FGLGN++ELP ++ LN K
Sbjct:  109 TMATVAAKSVPRVMPQQVIEAALFVGGMPLTIKKLASLFGSEMAADDVERILDELNDNYATEMRPYEIRLAEGGYRLDLRPDFDSVRNRVYGLGPKEVKLSREAVEVLALVAYRQPLTKSEIERLGKDNPGTAIRQLLRRELICIERGKTRKDEIKYHTTPRFLSLFGLGNLDELPQADELNLK 292          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A3E0Q242_9BACT (SMC-Scp complex subunit ScpB n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q242_9BACT)

HSP 1 Score: 209 bits (533), Expect = 3.910e-65
Identity = 102/172 (59.30%), Postives = 131/172 (76.16%), Query Frame = 0
Query:   16 IPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            + PR ++EA LFVGG+PLT K+L  LL   ++   VD+LLD+L   Y D+ RPYE+R+ EGGYRL+LR +FERIR+RVYG GPKEVKL+QDALE+LALVAY QPI+K E+   GK  A  +LRQL+RRELIA++R+ D  +EV Y TT RFLQ+FGL  + +LPY E L+ K
Sbjct:   87 VSPRQVLEALLFVGGEPLTGKRLADLLGGGFTHEQVDELLDELTHAYADQNRPYEVRLAEGGYRLVLRSEFERIRHRVYGLGPKEVKLSQDALEILALVAYHQPISKAEVEGHGKQNAGSVLRQLLRRELIALDRSGDGNSEVSYRTTERFLQLFGLRELADLPYPEDLDFK 258          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A517ZR53_9PLAN (Uncharacterized protein n=3 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZR53_9PLAN)

HSP 1 Score: 201 bits (512), Expect = 1.050e-61
Identity = 99/173 (57.23%), Postives = 130/173 (75.14%), Query Frame = 0
Query:   15 RIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            R  P  I+EAALFVGGKPLT+KKL  LL D +++S V  L D++N+ Y  E RPYEIR+ EGGY L LR  F R+RNRV+G GP+EVKL+QDAL +LALVAY+QPIT+++  A G+  A G+L QL+RR+LI I R+E+   EV Y TT RFL VFG+G+++ELP ++ L+ K
Sbjct:  105 RFTPPQILEAALFVGGKPLTSKKLAGLLGDSFNSSAVQSLADEMNQTYAAENRPYEIRLGEGGYTLALRESFSRVRNRVFGVGPREVKLSQDALGILALVAYQQPITREDAEATGRKNAGGLLSQLVRRQLIEIHRDEENPKEVTYHTTPRFLSVFGIGSLDELPMADVLDKK 277          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A2D6SXW1_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SXW1_9PLAN)

HSP 1 Score: 200 bits (508), Expect = 3.520e-61
Identity = 99/173 (57.23%), Postives = 128/173 (73.99%), Query Frame = 0
Query:   15 RIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            R+ PR +IEAALFVGG  LT +KL SL + E+    V+  +++LNRQY DE RPYEIR  EGGYRL LR +FE  RNRV+G GP++VKL++DALE+LALVAY QP+T   I   G+ K  G LRQLIRREL+ +ER  +K ++V Y+TT RFL VFGL +I+ELP ++ L+ K
Sbjct:   99 RVTPREVIEAALFVGGPALTIRKLGSLFHSEFDVDLVEQTVEELNRQYLDENRPYEIRFGEGGYRLALRSEFESFRNRVFGVGPRDVKLSRDALEILALVAYNQPVTAHGIEQFGRSKPTGTLRQLIRRELVTVERTANKTSDVAYVTTPRFLSVFGLHSIDELPTADELSFK 271          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: UPI0019B4FA14 (SMC-Scp complex subunit ScpB n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI0019B4FA14)

HSP 1 Score: 196 bits (499), Expect = 2.970e-60
Identity = 97/170 (57.06%), Postives = 124/170 (72.94%), Query Frame = 0
Query:   18 PRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            PR I+EA LFVGG  LT KKL  +L  E+   Y++  LD+LN  Y  E RPYEIR+ +GGYRL LR DFERIRN+ YG GPKEV+L+Q+ALEVLA+VAY QPIT   I   GK  +  +LRQL+RRELIA+ER  D+  +V+Y TTSRFL +FG+ +++ELP  E + +K
Sbjct:   69 PRQILEACLFVGGDALTAKKLSGVLRGEFPIEYIERELDELNTLYTSEGRPYEIRLGDGGYRLTLRDDFERIRNKAYGLGPKEVRLSQEALEVLAVVAYHQPITATAIEELGKPGSGAVLRQLLRRELIAVERQPDQPRDVRYHTTSRFLSLFGIRSLDELPRHEQVGYK 238          
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Match: A0A5C6B4D0_9PLAN (Uncharacterized protein n=2 Tax=Symmachiella macrocystis TaxID=2527985 RepID=A0A5C6B4D0_9PLAN)

HSP 1 Score: 197 bits (501), Expect = 4.020e-60
Identity = 97/173 (56.07%), Postives = 129/173 (74.57%), Query Frame = 0
Query:   15 RIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSYVDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKEVKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIERNEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK 187
            R  P  I+EAALFVGGKPL++KKL  LL D + +S V  L D++N+ Y  E RPYEIR+ EGGY L LR  F R+RNRV+G GP+EVKL+QDAL +LALVAY+QPIT+++  A G++ A  +L QL+RR+LIAI R+E+    V Y TT RFL VFG+G+++ELP ++ L+ K
Sbjct:   99 RFTPPQILEAALFVGGKPLSSKKLAGLLGDSFDSSAVQSLADEINQTYAAENRPYEIRLGEGGYSLALRESFARVRNRVFGIGPREVKLSQDALGILALVAYQQPITREDAEATGRNNAGSLLSQLVRRQLIAIHRDEENPKVVTYQTTPRFLSVFGIGSLDELPMADVLDKK 271          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94642.21839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AF66_9PLAN1.540e-12599.47SMC-Scp complex subunit ScpB n=8 Tax=Gimesia TaxID... [more]
A0A518ILQ2_9PLAN6.210e-11188.52Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A355G963_9PLAN5.520e-10987.43Uncharacterized protein n=8 Tax=Planctomycetaceae ... [more]
A0A517X3V5_9PLAN6.920e-10382.51Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A0A2E7D6P0_9PLAN3.370e-6659.24Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A3E0Q242_9BACT3.910e-6559.30SMC-Scp complex subunit ScpB n=1 Tax=Planctomycete... [more]
A0A517ZR53_9PLAN1.050e-6157.23Uncharacterized protein n=3 Tax=Symmachiella dynat... [more]
A0A2D6SXW1_9PLAN3.520e-6157.23Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
UPI0019B4FA142.970e-6057.06SMC-Scp complex subunit ScpB n=1 Tax=Candidatus Sa... [more]
A0A5C6B4D0_9PLAN4.020e-6056.07Uncharacterized protein n=2 Tax=Symmachiella macro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 12..93
e-value: 9.6E-13
score: 49.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 96..187
e-value: 2.7E-22
score: 80.2
IPR005234Chromosome segregation/condensation protein ScpBPIRSFPIRSF019345SCPBcoord: 3..187
e-value: 2.2E-38
score: 129.5
IPR005234Chromosome segregation/condensation protein ScpBPFAMPF04079SMC_ScpBcoord: 20..179
e-value: 2.0E-39
score: 134.8
IPR005234Chromosome segregation/condensation protein ScpBPANTHERPTHR34298FAMILY NOT NAMEDcoord: 15..185
NoneNo IPR availablePANTHERPTHR34298:SF2coord: 15..185
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 99..172
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 18..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94642contigM-pyrifera_M_contig94642:175..738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94642.21839.1mRNA_M-pyrifera_M_contig94642.21839.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94642 175..738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94642.21839.1 ID=prot_M-pyrifera_M_contig94642.21839.1|Name=mRNA_M-pyrifera_M_contig94642.21839.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp
AVKTSSQTATKRETRIPPRAIIEAALFVGGKPLTTKKLCSLLNDEYSTSY
VDDLLDDLNRQYNDEARPYEIRMEEGGYRLILRHDFERIRNRVYGFGPKE
VKLTQDALEVLALVAYRQPITKDEIIAAGKDKAAGILRQLIRRELIAIER
NEDKKAEVKYITTSRFLQVFGLGNIEELPYSESLNHK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR005234ScpB_csome_segregation
IPR036390WH_DNA-bd_sf