prot_M-pyrifera_M_contig94635.21836.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94635.21836.1
Unique Nameprot_M-pyrifera_M_contig94635.21836.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length92
Homology
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: A0A6N8YAU7_9ACTN (DUF2510 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YAU7_9ACTN)

HSP 1 Score: 62.4 bits (150), Expect = 2.270e-9
Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    1 MTDIPPG-WYDDPEQPANFRYWDGGQWTDHRSPK------------SGPAGRDQGVWAIVPEAFRLLGRGWRQLVVLALPLAAVMIVG 75
            MT++PP  WY DPE PA +RYWDG +WTDHR+P+             G + R + +  ++   +RL+ +  R L+V+   +A V + G
Sbjct:    1 MTELPPADWYVDPEDPAQYRYWDGSRWTDHRAPRHSASYEQAGAPGDGGSSRHRRIGDLLTGTWRLMTQNLRPLLVIYAVVAVVYLAG 88          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: A0A2D8GGV0_9ACTN (DUF2510 domain-containing protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GGV0_9ACTN)

HSP 1 Score: 61.6 bits (148), Expect = 3.890e-9
Identity = 36/96 (37.50%), Postives = 49/96 (51.04%), Query Frame = 0
Query:    7 GWYDDPEQPANFRYWDGGQWTDHRSPKSGP------AGRDQGVWAIVPEAFRLLGRGWR------QLVVLALPLAAV-MIVGGILAFTAADSAFDP 89
            GWYDDPE P+ +RYWDG +WT HRSPK  P      +         V  AF L G+ W        +  L    AAV +++G IL+F  +++   P
Sbjct:    8 GWYDDPEHPSQYRYWDGNEWTAHRSPKQTPPPPATSSSIPASATETVSAAFNLFGQHWSGXLGLAAIATLGFAAAAVAVVIGLILSFEGSNTLTGP 103          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: UPI001E42AA7C (DUF2510 domain-containing protein n=1 Tax=Nocardioides anomalus TaxID=2712223 RepID=UPI001E42AA7C)

HSP 1 Score: 58.9 bits (141), Expect = 1.730e-8
Identity = 22/34 (64.71%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    1 MTDIPPGWYDDPEQPANFRYWDGGQWTDHRSPKS 34
            MT  P GWY DP+ PA +RYWDG  WT+HRSP+S
Sbjct:    1 MTQTPAGWYADPQDPAQYRYWDGAAWTEHRSPRS 34          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: UPI0004127F1C (DUF2510 domain-containing protein n=1 Tax=Nocardioides halotolerans TaxID=433660 RepID=UPI0004127F1C)

HSP 1 Score: 57.4 bits (137), Expect = 6.820e-8
Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    1 MTDIPP-GWYDDPEQPANFRYWDGGQWTDHRSPKSGPAGRDQ 41
            MT  P  GW+ DPE    FRYWDG  WTDHRSP+ GPAG DQ
Sbjct:    1 MTQTPQAGWFVDPEDATQFRYWDGSAWTDHRSPR-GPAGSDQ 41          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: A0A543KQE1_9MICO (Putative RDD family membrane protein YckC n=1 Tax=Ornithinimicrobium humiphilum TaxID=125288 RepID=A0A543KQE1_9MICO)

HSP 1 Score: 57.0 bits (136), Expect = 1.550e-7
Identity = 28/51 (54.90%), Postives = 30/51 (58.82%), Query Frame = 0
Query:    7 GWYDDPEQPANFRYWDGGQWTDHRSPKSGP----AGRD---QGVWAIVPEA 50
            GWYDDP+ P N RYWDG QWTDH SPK  P    AGR    +  W   P A
Sbjct:    6 GWYDDPQNPDNLRYWDGVQWTDHTSPKQKPNLEQAGRAIAAEDGWGTAPGA 56          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: A0A3D0S4J2_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides sp. TaxID=35761 RepID=A0A3D0S4J2_9ACTN)

HSP 1 Score: 54.7 bits (130), Expect = 2.740e-7
Identity = 27/62 (43.55%), Postives = 33/62 (53.23%), Query Frame = 0
Query:    1 MTDIPPGWYDDPEQPANFRYWDGGQWTDHRSPKSGPAGRDQGVWAIVPEAFRLLGRGWRQLV 62
            M+  P GWY DP+ PA  RYWDG +WT HRSP++         W    EA    GR  + LV
Sbjct:    1 MSSTPAGWYPDPDAPAQDRYWDGSEWTAHRSPRT---------WQPGSEAVADSGRATKALV 53          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: UPI0003630229 (RDD family protein n=1 Tax=Kribbella catacumbae TaxID=460086 RepID=UPI0003630229)

HSP 1 Score: 56.2 bits (134), Expect = 2.900e-7
Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 0
Query:    4 IPPGWYDDPEQPANFRYWDGGQWTDHRSPKSGP 36
             P GWYDDP+ P   RYWDGG WTD+R P+ GP
Sbjct:    3 FPAGWYDDPQDPTQQRYWDGGFWTDYRRPREGP 35          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: A0A345NRW9_9MICO (RDD family protein n=1 Tax=Ornithinimicrobium avium TaxID=2283195 RepID=A0A345NRW9_9MICO)

HSP 1 Score: 56.2 bits (134), Expect = 3.050e-7
Identity = 25/35 (71.43%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    7 GWYDDPEQPANFRYWDGGQWTDHRSPKSGPAGRDQ 41
            GWYDDPE   N RYWDG QWTDH+SPK  P G DQ
Sbjct:    6 GWYDDPENADNLRYWDGVQWTDHKSPKRKP-GLDQ 39          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: A0A4R2II26_9ACTN (Putative RDD family membrane protein YckC n=2 Tax=Kribbella sp. VKM Ac-2541 TaxID=2512217 RepID=A0A4R2II26_9ACTN)

HSP 1 Score: 56.2 bits (134), Expect = 3.300e-7
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    4 IPPGWYDDPEQPANFRYWDGGQWTDHRSPKSGPA 37
             P GWYDDP++P+  RYWDG  WTD R P+ GPA
Sbjct:   13 FPAGWYDDPQEPSQQRYWDGSTWTDQRRPQQGPA 46          
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Match: M4WNU1_9CAUD (DUF2510 domain-containing protein n=3 Tax=Buttersvirus TaxID=2169633 RepID=M4WNU1_9CAUD)

HSP 1 Score: 53.5 bits (127), Expect = 3.330e-7
Identity = 23/37 (62.16%), Postives = 26/37 (70.27%), Query Frame = 0
Query:    1 MTDIPPGWYDDPEQPANFRYWDGGQWTDHRSPKSGPA 37
            MT++PPGWY DPE     RYWDG QWT HR+P   PA
Sbjct:    1 MTEVPPGWYPDPEG-GGQRYWDGRQWTSHRAPLPPPA 36          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94635.21836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N8YAU7_9ACTN2.270e-936.36DUF2510 domain-containing protein n=1 Tax=Acidimic... [more]
A0A2D8GGV0_9ACTN3.890e-937.50DUF2510 domain-containing protein n=5 Tax=Acidimic... [more]
UPI001E42AA7C1.730e-864.71DUF2510 domain-containing protein n=1 Tax=Nocardio... [more]
UPI0004127F1C6.820e-864.29DUF2510 domain-containing protein n=1 Tax=Nocardio... [more]
A0A543KQE1_9MICO1.550e-754.90Putative RDD family membrane protein YckC n=1 Tax=... [more]
A0A3D0S4J2_9ACTN2.740e-743.55Uncharacterized protein n=1 Tax=Nocardioides sp. T... [more]
UPI00036302292.900e-763.64RDD family protein n=1 Tax=Kribbella catacumbae Ta... [more]
A0A345NRW9_9MICO3.050e-771.43RDD family protein n=1 Tax=Ornithinimicrobium aviu... [more]
A0A4R2II26_9ACTN3.300e-761.76Putative RDD family membrane protein YckC n=2 Tax=... [more]
M4WNU1_9CAUD3.330e-762.16DUF2510 domain-containing protein n=3 Tax=Buttersv... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018929Domain of unknown function DUF2510PFAMPF10708DUF2510coord: 6..37
e-value: 6.7E-12
score: 44.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..83
NoneNo IPR availableTMHMMTMhelixcoord: 61..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94635contigM-pyrifera_M_contig94635:176..451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94635.21836.1mRNA_M-pyrifera_M_contig94635.21836.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94635 176..451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94635.21836.1 ID=prot_M-pyrifera_M_contig94635.21836.1|Name=mRNA_M-pyrifera_M_contig94635.21836.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp
MTDIPPGWYDDPEQPANFRYWDGGQWTDHRSPKSGPAGRDQGVWAIVPEA
FRLLGRGWRQLVVLALPLAAVMIVGGILAFTAADSAFDPSLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018929DUF2510