prot_M-pyrifera_M_contig94268.21764.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94268.21764.1
Unique Nameprot_M-pyrifera_M_contig94268.21764.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length196
Homology
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: A0A8C4I8P8_DICLA (UTP20 small subunit processome component n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4I8P8_DICLA)

HSP 1 Score: 125 bits (313), Expect = 1.250e-29
Identity = 75/196 (38.27%), Postives = 117/196 (59.69%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSDLSATVGAVFGLLR 196
            +++DV  ++DR    G +  E  ++F E L +  ++N T  +T F+ +V    QS  +L+ H+  +VE L   +A  D  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +++VK++  +Y   Y TLL++ + +IR+FAAESFSFL+R  P  DL A +G VF  L+
Sbjct:   28 VNIDVIHRIDRT---GSYAEEVETYFSEGLTKWRDLNLTLHFTTFLKEVSNKSQSFNMLVFHQTSIVESLKTHLAVKDSLAYQPLLDLVVQLARDLQTDFYPHFPDFFILITSLLDTKDTEVLEWAFTCLSYLYKYLWRVMVKDMSNIYS-LYSTLLAHKKEHIRKFAAESFSFLMRKVP--DLDALLGHVFSDLQ 217          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: A0A8C4I8L6_DICLA (UTP20 small subunit processome component n=2 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4I8L6_DICLA)

HSP 1 Score: 125 bits (313), Expect = 1.250e-29
Identity = 75/196 (38.27%), Postives = 117/196 (59.69%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSDLSATVGAVFGLLR 196
            +++DV  ++DR    G +  E  ++F E L +  ++N T  +T F+ +V    QS  +L+ H+  +VE L   +A  D  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +++VK++  +Y   Y TLL++ + +IR+FAAESFSFL+R  P  DL A +G VF  L+
Sbjct:   28 VNIDVIHRIDRT---GSYAEEVETYFSEGLTKWRDLNLTLHFTTFLKEVSNKSQSFNMLVFHQTSIVESLKTHLAVKDSLAYQPLLDLVVQLARDLQTDFYPHFPDFFILITSLLDTKDTEVLEWAFTCLSYLYKYLWRVMVKDMSNIYS-LYSTLLAHKKEHIRKFAAESFSFLMRKVP--DLDALLGHVFSDLQ 217          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: A0A8C4I9W2_DICLA (UTP20 small subunit processome component n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4I9W2_DICLA)

HSP 1 Score: 125 bits (313), Expect = 1.250e-29
Identity = 75/196 (38.27%), Postives = 117/196 (59.69%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSDLSATVGAVFGLLR 196
            +++DV  ++DR    G +  E  ++F E L +  ++N T  +T F+ +V    QS  +L+ H+  +VE L   +A  D  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +++VK++  +Y   Y TLL++ + +IR+FAAESFSFL+R  P  DL A +G VF  L+
Sbjct:   28 VNIDVIHRIDRT---GSYAEEVETYFSEGLTKWRDLNLTLHFTTFLKEVSNKSQSFNMLVFHQTSIVESLKTHLAVKDSLAYQPLLDLVVQLARDLQTDFYPHFPDFFILITSLLDTKDTEVLEWAFTCLSYLYKYLWRVMVKDMSNIYS-LYSTLLAHKKEHIRKFAAESFSFLMRKVP--DLDALLGHVFSDLQ 217          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: UPI0010545B3C (small subunit processome component 20 homolog n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI0010545B3C)

HSP 1 Score: 124 bits (311), Expect = 2.320e-29
Identity = 74/192 (38.54%), Postives = 115/192 (59.90%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSDLSATVGAVF 192
            +++DV  ++DR    G +D E  ++F E L +  ++N T+ +T F+ +V    QS  +L+ H+  +VE L   +A  D  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +++VK++  +Y   Y TLL++ + +IR FAAESFSFL+R  P  DL A +  VF
Sbjct:   28 VNIDVIHRIDRT---GSYDEEVETYFSEGLTKWRDLNLTEHFTTFLKEVSNKSQSFNMLVFHQKSIVESLKTHLAVKDSLAYQPLLDLVVQLARDLQTDFYPHFPDFFLLITSLLDSKDTELLEWAFTCLSYLYKYLWRVMVKDMTNIYT-LYSTLLAHKKEHIRNFAAESFSFLMRKVP--DLDAVLTHVF 213          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: UPI0015E20B5E (LOW QUALITY PROTEIN: small subunit processome component 20 homolog n=1 Tax=Morone saxatilis TaxID=34816 RepID=UPI0015E20B5E)

HSP 1 Score: 124 bits (310), Expect = 3.160e-29
Identity = 75/196 (38.27%), Postives = 116/196 (59.18%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSDLSATVGAVFGLLR 196
            +++DV  ++DR    G +  E  ++F E L +  ++N T  +T F+ +V    QS  +L+ H+  +VE L   +A  D  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +L+VK++  +Y   Y TLL++ + +IR+FAAESFSFL+R  P  DL A +  VF  L+
Sbjct:   28 VNIDVIHRIDRT---GSYAEEVETYFSEGLTKWRDLNLTLHFTTFLKEVSNKSQSFNMLVFHQTSIVESLKTHLAVKDSLAYQPLLDLVVQLARDLQTDFYPHFPDFFILITSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVKDMSNIYS-LYSTLLAHKKEHIRKFAAESFSFLMRKVP--DLDALLSHVFSDLQ 217          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: UPI001F07F4B8 (small subunit processome component 20 homolog n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07F4B8)

HSP 1 Score: 123 bits (309), Expect = 4.310e-29
Identity = 70/183 (38.25%), Postives = 110/183 (60.11%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSD 183
            +++DV  ++DR    G ++ +  ++F E L +  ++N T+ +T F+ +V    QS  LL+ H+  +VE L   +A     A  PLL L+  LARDL  +F P+F      +T LL+  D ++ E  FTC+ Y FK+L +L+VK++  +Y   Y TLL++ + +IRRFAAESFSFL+R  P  D
Sbjct:   28 VNIDVIHRIDRT---GSYEEDVETYFSEGLTKWRDLNLTEHFTTFLKEVSNKCQSFNLLVFHQNAIVESLKTHLAVKKSLAFQPLLELVVQLARDLQTDFYPHFPAFFPLITSLLETQDTELLEWAFTCLSYLFKYLWRLMVKDITNMYS-LYSTLLAHKKEHIRRFAAESFSFLMRKVPDLD 206          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: A0A6J2S8H2_COTGO (LOW QUALITY PROTEIN: small subunit processome component 20 homolog n=1 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2S8H2_COTGO)

HSP 1 Score: 123 bits (308), Expect = 5.870e-29
Identity = 74/196 (37.76%), Postives = 117/196 (59.69%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSDLSATVGAVFGLLR 196
            +++DV  ++DR    G ++ E  ++F E L +  ++N T+ +T F+ +V    QS  +L+ H+  +VE L   +A  +  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +L+VK++  +Y   Y TLL + + +IR+FAAESFSFL+R  P  DL A +  VF  L+
Sbjct:   28 VNIDVIHRIDRT---GSYEEEVETYFSEGLTKWRDLNLTENFTTFLKEVSNHSQSFNMLVFHQKSIVESLKMHLAVKNSLAYQPLLDLVVQLARDLQTDFYPHFPDFFILITSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVKDMTNIYS-LYSTLLEHKKEHIRKFAAESFSFLMRKVP--DLDALLSHVFSDLQ 217          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: UPI000496A233 (small subunit processome component 20 homolog n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=UPI000496A233)

HSP 1 Score: 123 bits (308), Expect = 5.870e-29
Identity = 72/183 (39.34%), Postives = 111/183 (60.66%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSD 183
            +++DV  ++DR    G F  E  ++F E L +  ++N T+Q+T F+ +V    QS  +L+ H+  +VE L   +A  D  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +L+VK++  +Y   Y TLL++ + +IR+FAAESFSFL+R  P  D
Sbjct:   28 VNIDVIHRIDRI---GSFAEEVETYFFEGLTKWRDLNLTQQFTTFLKEVSNKSQSFNMLVFHQKSIVECLKTNLAVKDSLASQPLLDLVVQLARDLQTDFYPHFPDFFVLITSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVKDMTNIYS-LYSTLLAHKKDHIRKFAAESFSFLMRKVPDFD 206          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: UPI001899E2B8 (small subunit processome component 20 homolog n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI001899E2B8)

HSP 1 Score: 122 bits (307), Expect = 7.930e-29
Identity = 70/183 (38.25%), Postives = 112/183 (61.20%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSD 183
            +++DV R++DR    G +  E  ++F E L +  ++N T+ +T F+ +V    QS  +L+ H+  +VE L   +A  +  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +++VK++  +Y   Y TLL++S+ +IR+FAAESFSFL+R  P  D
Sbjct:   28 VNIDVIRRIDRT---GSYAEEVETYFSEGLTKWKDLNLTEHFTTFLKEVVDKSQSFNMLVFHQKSIVESLKTHLAVQNSLAFQPLLDLVVQLARDLQTDFYPHFPDFFLLITSLLDTKDTELLEWAFTCLSYLYKYLWRVMVKDMSNIYS-LYSTLLAHSKEHIRKFAAESFSFLMRKVPDLD 206          
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Match: A0A6A5E0R9_PERFL (DRIM domain-containing protein n=2 Tax=Perca fluviatilis TaxID=8168 RepID=A0A6A5E0R9_PERFL)

HSP 1 Score: 122 bits (307), Expect = 7.980e-29
Identity = 74/196 (37.76%), Postives = 116/196 (59.18%), Query Frame = 0
Query:    1 MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVRPLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEFRPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYERFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSDLSATVGAVFGLLR 196
            +++DV  ++DR    G +  E  ++F E L +  ++N T+ +T F+ +V    QS  +L+ H+  +VE L   +A  +  A  PLL L+  LARDL  +F P+F      +T LLD  D ++ E  FTC+ Y +K+L +L+VK++  +Y   Y TLL + + +IR+FAAESFSFL+R  P  DL A +  VF  L+
Sbjct:   28 VNIDVIHRIDRT---GSYAEEVETYFSEGLTKWRDLNLTEHFTTFLKEVSNQSQSFNMLVFHQKSIVESLKTHLAVKNSLAYQPLLDLVVQLARDLQTDFYPHFPDFFVLITSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVKDMTNIYS-LYSTLLEHKKEHIRKFAAESFSFLMRKVP--DLDALLSYVFSDLQ 217          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94268.21764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8C4I8P8_DICLA1.250e-2938.27UTP20 small subunit processome component n=1 Tax=D... [more]
A0A8C4I8L6_DICLA1.250e-2938.27UTP20 small subunit processome component n=2 Tax=D... [more]
A0A8C4I9W2_DICLA1.250e-2938.27UTP20 small subunit processome component n=1 Tax=D... [more]
UPI0010545B3C2.320e-2938.54small subunit processome component 20 homolog n=1 ... [more]
UPI0015E20B5E3.160e-2938.27LOW QUALITY PROTEIN: small subunit processome comp... [more]
UPI001F07F4B84.310e-2938.25small subunit processome component 20 homolog n=1 ... [more]
A0A6J2S8H2_COTGO5.870e-2937.76LOW QUALITY PROTEIN: small subunit processome comp... [more]
UPI000496A2335.870e-2939.34small subunit processome component 20 homolog n=1 ... [more]
UPI001899E2B87.930e-2938.25small subunit processome component 20 homolog n=1 ... [more]
A0A6A5E0R9_PERFL7.980e-2937.76DRIM domain-containing protein n=2 Tax=Perca fluvi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR17695UNCHARACTERIZEDcoord: 15..184
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..68
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 62..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94268contigM-pyrifera_M_contig94268:143..730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94268.21764.1mRNA_M-pyrifera_M_contig94268.21764.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94268 143..742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94268.21764.1 ID=prot_M-pyrifera_M_contig94268.21764.1|Name=mRNA_M-pyrifera_M_contig94268.21764.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp
MSVDVFRKVDRKLGQGKFDAEYASHFQEALERQLEVNATKQYTNFVADVR
PLVQSLPLLLLHKGRVVEMLLAAVAAADYSALAPLLALLGALARDLLEEF
RPYFEQVVARVTLLLDPNDPQINEQVFTCIGYQFKFLRKLLVKEVQELYE
RFYHTLLSNSRAYIRRFAAESFSFLLRNCPSSDLSATVGAVFGLLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold