prot_M-pyrifera_M_contig93672.21639.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93672.21639.1
Unique Nameprot_M-pyrifera_M_contig93672.21639.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A2V7PR38_9BACT (50S ribosomal protein L35 n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7PR38_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 2.150e-9
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MKRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            MKRF  TG+G L+RG A ++H+L+KK RKR N+LGK   VS+AD R+  +L+
Sbjct:   11 MKRFTRTGSGKLKRGKANKRHILTKKTRKRKNQLGKAGLVSSADFRRVNRLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A7Y4RSA4_9BACT (50S ribosomal protein L35 n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7Y4RSA4_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.240e-8
Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MKRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            MKRF +TG+G ++R  A ++H+L+KK RKR NRLGK A VS+AD  +  +L+
Sbjct:   11 MKRFTLTGSGKIKRHRANKRHILTKKTRKRKNRLGKPALVSSADFPRVRRLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: UPI0003B3FD15 (50S ribosomal protein L35 n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI0003B3FD15)

HSP 1 Score: 52.8 bits (125), Expect = 7.340e-8
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    2 KRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            KRF   G+G  +R HA R+H+L+KK  KR  +L K+A +SAAD+R+A+QL+
Sbjct:   12 KRFTRAGSGKFKRNHANRRHILTKKATKRKRQLRKSAYLSAADVREAKQLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A7C1AXT3_9FIRM (50S ribosomal protein L35 n=2 Tax=Bacteria TaxID=2 RepID=A0A7C1AXT3_9FIRM)

HSP 1 Score: 52.0 bits (123), Expect = 1.480e-7
Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    2 KRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            KRF V+G G + R HA + H+LSKK RKR NRL K A VSAAD +   +L+
Sbjct:   12 KRFKVSGRGRIMRNHANKGHILSKKTRKRKNRLSKPALVSAADRKHISRLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A7V4KN67_9BACT (50S ribosomal protein L35 n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V4KN67_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 2.910e-7
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    2 KRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            KRF VTG G L+RG A   H+L+KK RKR NRL K + VS+AD  +  +L+
Sbjct:   12 KRFTVTGTGKLKRGRANHSHILTKKTRKRKNRLKKESLVSSADFPRVSRLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A7Y2NWH4_9BACT (50S ribosomal protein L35 n=3 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7Y2NWH4_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 5.870e-7
Identity = 28/52 (53.85%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 MKRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            MKRF  TG G LRR HA   H+L+KK RKR NRL K   VS+AD  +  +L+
Sbjct:   11 MKRFRKTGTGKLRRFHANHSHILTKKSRKRKNRLKKGDLVSSADFPRVSRLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A838REK8_9BACT (50S ribosomal protein L35 n=6 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A838REK8_9BACT)

HSP 1 Score: 49.3 bits (116), Expect = 1.680e-6
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 MKRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            MKRF  TG G L+R HA   H+L+KK RKR NRL K   VS+AD  +  +L+
Sbjct:   11 MKRFKRTGTGKLKRWHANHSHILTKKSRKRKNRLKKGDLVSSADFPRVSRLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A524HTP6_9BACT (50S ribosomal protein L35 n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A524HTP6_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 2.380e-6
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    2 KRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            KRF  TG G LRR HA   H+L+KK RKR NRL K   VS+AD  +  +L+
Sbjct:   12 KRFRATGTGKLRRFHANHSHILTKKSRKRKNRLKKGDLVSSADFPRVSRLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A7W0YID5_9BACT (50S ribosomal protein L35 n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7W0YID5_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 2.380e-6
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 MKRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLV 52
            MKRF  TG+G L+R HA   H+L+KK RKR N+L K   VS+AD  +  +L+
Sbjct:   11 MKRFTRTGSGKLKRFHANHSHILTKKSRKRKNKLKKPDLVSSADYPRVNRLL 62          
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Match: A0A7C6W484_9BACT (50S ribosomal protein L35 n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7C6W484_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 2.440e-6
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    2 KRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQLVG 53
            KRF +TG G ++R HA + H+L+KK +KR  RL KT  VS AD    + L+G
Sbjct:   12 KRFKLTGTGKIKRKHAFKSHILTKKSKKRKKRLTKTGLVSKADTNNVKHLLG 63          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93672.21639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V7PR38_9BACT2.150e-953.8550S ribosomal protein L35 n=1 Tax=Gemmatimonadetes... [more]
A0A7Y4RSA4_9BACT1.240e-851.9250S ribosomal protein L35 n=1 Tax=Gemmatimonadales... [more]
UPI0003B3FD157.340e-850.9850S ribosomal protein L35 n=1 Tax=Methylohalobius ... [more]
A0A7C1AXT3_9FIRM1.480e-754.9050S ribosomal protein L35 n=2 Tax=Bacteria TaxID=2... [more]
A0A7V4KN67_9BACT2.910e-752.9450S ribosomal protein L35 n=1 Tax=Gemmatimonadetes... [more]
A0A7Y2NWH4_9BACT5.870e-753.8550S ribosomal protein L35 n=3 Tax=Gemmatimonadales... [more]
A0A838REK8_9BACT1.680e-651.9250S ribosomal protein L35 n=6 Tax=Gemmatimonadales... [more]
A0A524HTP6_9BACT2.380e-652.9450S ribosomal protein L35 n=1 Tax=Gemmatimonadales... [more]
A0A7W0YID5_9BACT2.380e-650.0050S ribosomal protein L35 n=1 Tax=Gemmatimonadales... [more]
A0A7C6W484_9BACT2.440e-648.0850S ribosomal protein L35 n=1 Tax=Bacteroidales ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.530coord: 1..52
e-value: 8.3E-14
score: 54.0
NoneNo IPR availablePANTHERPTHR33343:SF150S RIBOSOMAL PROTEIN L35coord: 2..53
IPR021137Ribosomal protein L35PFAMPF01632Ribosomal_L35pcoord: 2..51
e-value: 1.5E-14
score: 54.2
IPR021137Ribosomal protein L35PANTHERPTHR33343FAMILY NOT NAMEDcoord: 2..53
IPR037229Ribosomal protein L35 superfamilySUPERFAMILY143034L35p-likecoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93672contigM-pyrifera_M_contig93672:64..231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93672.21639.1mRNA_M-pyrifera_M_contig93672.21639.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93672 46..231 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93672.21639.1 ID=prot_M-pyrifera_M_contig93672.21639.1|Name=mRNA_M-pyrifera_M_contig93672.21639.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
MKRFIVTGNGTLRRGHAGRKHLLSKKGRKRINRLGKTAEVSAADLRQAEQ
LVGRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021137Ribosomal_L35
IPR037229Ribosomal_L35_sf